Tan0011803 (gene) Snake gourd v1

Overview


Name	Tan0011803
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG05: 47559821 .. 47563889 (-)
RNA-Seq Expression	Tan0011803
Synteny	Tan0011803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCCGATCAATACGCAATGGATCTAGGTTTTACTCAAGTGAATCGCCCAAGAACCAAAAGCGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCACCGAGGCCATCAGCCTCCCTCATACGGCCTACTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCGTCTTCATCTCAACAGGGATCTACAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGGTAGTTCAATTGTTGAAATTATTCAAAATATGTATCCTCAAGGATTCTACTTCCTACCGGAATCCTTGATCAAAACAAGGAAATATTATGAATTCATCCTTGTAGATTCAAAATCTGTCCAGATAACTCATATCCCGGACAGAAATGATCCTTCAAAAATTGCTTACTCAAAACTAAAAATTTTTAAAGTCTTAAACCCTACCAATTGGAATCAAAGTATCTTCACAGAAAGAACACTTTCAAAACCATTCAATCCCCAGACATACTCGTACCGAGATTATGTTGAAGCTTGGTACAATGTAATGTGGTACAAAAATTATGAGCATTCTTGGTTTATTCAATTCTGTCAAAATGCTTACAAAATAGATTACCCATTCTGGTTTATCAAATGGTGGAAGACTTTCTTCCTATAAAAAGAAATTTTCCCAGTTCCTATTCAAGAGTCATTCCATTAATTTTCACAAACAATACACAAAAATGCATTCCCACTCACAATGCGTTTTTGTTTATACTTTCAAACCCCTTGGATATTCTGTTGGAATTTCCAAATCAATACATACACCTATTACAAACAAATCGTAAAAGTTTTACAAATCAAATGGTGGGACAAGTACAACTTTTCTCATGCAGGAATCAAAGAAGTGATGCAATGGTTTGCCGATAATGGCTACCTCCAAGACCTGTCAAAGAAGAAAAATGCAGAGTTCCTCAATTCCAAATCAAAGTCACTATTTTTGCCTTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATTTTGAATCAAGTTACTTCAATAGCATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATGTAAACAAATAAAACAAAGTGTTGTATAATAAAATGTACATTATAATAAATTGTAAACTCCACATTAGAACGTAAGGAAAATGCCCAAATCTTGTTGCGGAAGAAAATTATGAAGAATCACCATAAAGGACTGATGCGAAGGACTGTTGCGGTGTGTGGTCCCGGTAATAAATCTCGAGATGAGTAATAAATTCGTTGGTCAGCATATCTAGCCTTCACGCCTGAAAAGTGATTTGACATGATATTCGAACCTATCAGATAAGGACAACAAATATCATCTTTATTAAAGTCACTTTAATAAAGGGATACGACAAAAGATGGTGGAGGAATAGTAGTACGCATTATTGTAATAGTAAGTGAATAGTAGTGTGCATTATTGTAAAGAATCGAATCTTTTACTTTTCGTACATTTTGTTTTTTGTAATCATTATATCTTTTGTCATATCAATCCAGTCAGGGGTCTTGTCCTGTCGGATTTAGTCTTATCTTTTAGTTTTTTGCATTGTATTGTAATTTCAAATCCGGAGTCTATAAAAGACTTCGATCTTGTAATCAAAGGGCATCGGAAAACTTTCGAGCTTTCTTCTAAAGTTTGAAACACTTCCACGCTCTCTTAAGCCTTGTAAACGATGCTAATTCTCTTCGCGGTATATCGAGGAGCAATCTTTTCGTACATTTTATTTTTTGTAATCATTTATCTTTTGTCATATCAATCCAGTCAGGGGTCTTGTCCTGTCGGATTGAGTGTTATCTTTTAGTTTTTTGCATTGTATTGTAATTTCAAATCCGGAGTCTTAAAAGACTTCGATCTTGTAATCAAAGGGCATCGGAAAACTTTTGAGCTTTCTTCTAAAGTTTGAAACACTTCCACGCTCTCTTAAGCCTTGTAAACGATCCTAATTCTTTTCGCGGTATATCAAGGAGCAATTGGTATCAGAGCCATTATTCAATAAAATTACCTTCTTTTACTCATCCTTTGCTAGAATAGAAAAATTTTCAATCTATTTTCCAAACTTTTGAAACTCATCAATTTATCTTGCGTCCGCTAGTCGACAGCTGGTTGGTAAAGGTTGTGTTCCCGGCAGCAAGTGTAAGTCCGTTGGTAAGCTCCTGTTCCCCAGTAACTAGTACTTGATATAATTGCTGTATTTTCTACAAGTTTTGAAAAAGAAAGAAAATTATTTCTAGTCTATTTTAATTTATGCATAAAAGAAGTTAATTATGTCTAAAATTTTGAAAAAAATAATGAGTCCCGGAGTCAAAGGAAAAGGTATTTCAATTTCAGATGACCATGAAGATTACAAAGGTGATTCAAATACAATACTTTCTAAATTAACTAATCAAGAGCTATCAATAGCAAAAATAGAAGACAAACTTCATCAATGGAGTATCCTAAAGATAGATCCAAAAATGGTCTATTACCATAGTACTTTCAATCTCACTCAGAGAAATTGTGTAAAAATTTCTGAGAAAAACATTCCCATAAACAATGACCATGAATCAATAAATCTCTTTTCAAAAAAGCTTATTCTACAACACCGTGAAGAATTTAATTATCTTCACATAGGATTAGTTCAAATTTCCATAAAGCCTTTATTCAGATTAGGCTTAGATATACCTGTCTTAGTCTCTTTAAGAGATAAAAGACACTTTAATTTCTCAAACTCTCTTCTCGGGGTGGTTTAGTCTAACCTCGAAAAAGGACCAATTTTCTTCAATTGTTACCCAAATTTTACTCTTTCCTTACAAAATCCAAATATCCTATCTTCCTTGATAGCCGATGTTTATACACAAAATCTTAATATTCAAGAGGAATCTCACTCCACAGTGGTGATTTTTAGAATTTGTTACAAATTAATGAATACAAACATTTCTCCAAGAGCTTTAAGGTCTTCCCCAAAGGGATCAACAATCCTTATAGAAGCAAACCTAGATAAGTCCTCAATTACTGTCCCAAAAAGTTTATCTTGAGAATAAATCACTAGAAATCCAACGTGGAAGCTTACGAAAGCTTTCACTCAACCAAAAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAGATGGGGCCGTTGAAATAAAATTCTCGGAAGAAACAGAGGTTACTAAAGTCAAGGAATTCATGTCCTCAAGACCAAGTACCTCTCGAACCTCTGACCTCGAAGCCGACTCAAAATTCTATTTTGATCGATCTAACTTTCGTTCTTGAGTAAAATCACCAATATAGAACAAAATGTAGCAAATGTTCATTATGAAGCACAACCACAATCTCCAACCCAAACAGACATGGATAATCGATCTATGTTCTCTAGTCAATTAAATGTTCTTATTGAAGGATTTTCAATTAACAAAGAAGCACTAAAAAAGGATTTCCTTTCAATAAAAAACAAAACAAAGAGGAATGCCTTTTTCAAAAAATATGATGAAAACCATAGATCTCAAAATCGAAGTCAAAATGGTATTCATTTATGTAAGAAATAGAACAAAATATTCCATTTTTTACATGGATGAAACAATCTGAAAACGAAATCAATATGTTGCTAGAAACATGGAAAACAAGCCAAAGGGGAAATATTCACTCAACTCCTTCCTCCCCTAGAAGAGATAGAATTTGAAACAATTTATGGAGAAAAGGTCAAAGCTAGTCCATTTAAAAATATTAGTGAGAAGGAAGAGAAAAATGTTCCTACCCTAAAAAATATAAAAAATATTCAACTTCAAAATAATTTTTCCAATAAAATTCTTTCCACAATAGCAAATCAAGTAGAAAAGATTGAGGGAAAAATATCAAAACCTTCTATTGCTTCCTCTTCAAATGGAGGAATACTAATACCTCCAATAGATTAA

mRNA sequence

ATGAGCGCCGATCAATACGCAATGGATCTAGGTTTTACTCAAGTGAATCGCCCAAGAACCAAAAGCGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCACCGAGGCCATCAGCCTCCCTCATACGGCCTACTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCGTCTTCATCTCAACAGGGATCTACAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGAGTTCCTCAATTCCAAATCAAAGTCACTATTTTTGCCTTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATTTTGAATCAAGTTACTTCAATAGCATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATAATTTGTTACAAATTAATGAATACAAACATTTCTCCAAGAGCTTTAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAGATGGGGCCGTTGAAATAAAATTCTCGGAAGAAACAGAGAAACATGGAAAACAAGCCAAAGGGGAAATATTCACTCAACTCCTTCCTCCCCTAGAAGAGATAGAATTTGAAACAATTTATGGAGAAAAGGTCAAAGCTAGTCCATTTAAAAATATTAGTGAGAAGGAAGAGAAAAATGTTCCTACCCTAAAAAATATAAAAAATATTCAACTTCAAAATAATTTTTCCAATAAAATTCTTTCCACAATAGCAAATCAAGTAGAAAAGATTGAGGGAAAAATATCAAAACCTTCTATTGCTTCCTCTTCAAATGGAGGAATACTAATACCTCCAATAGATTAA

Coding sequence (CDS)

ATGAGCGCCGATCAATACGCAATGGATCTAGGTTTTACTCAAGTGAATCGCCCAAGAACCAAAAGCGCATCGATTCAAATAAGAGATTCAATGGAGTCATTAACTCCACCACCGAGGCCATCAGCCTCCCTCATACGGCCTACTGCCGTTACACCAATGAGACCTTCCGTCTCACCTACTACTCCGTCTTCATCTCAACAGGGATCTACAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTAAACCTGAAATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGAGTTCCTCAATTCCAAATCAAAGTCACTATTTTTGCCTTTAGCACAAACAACAACAGAGGCAGATTTACAAAAAATTTTGAATCAAGTTACTTCAATAGCATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAATGATCCGTTTTTAGATTCCCAACCAATAATTTGTTACAAATTAATGAATACAAACATTTCTCCAAGAGCTTTAAGAAATTCAAATTTAGCCCAAATTATCGAACATACAGATGGGGCCGTTGAAATAAAATTCTCGGAAGAAACAGAGAAACATGGAAAACAAGCCAAAGGGGAAATATTCACTCAACTCCTTCCTCCCCTAGAAGAGATAGAATTTGAAACAATTTATGGAGAAAAGGTCAAAGCTAGTCCATTTAAAAATATTAGTGAGAAGGAAGAGAAAAATGTTCCTACCCTAAAAAATATAAAAAATATTCAACTTCAAAATAATTTTTCCAATAAAATTCTTTCCACAATAGCAAATCAAGTAGAAAAGATTGAGGGAAAAATATCAAAACCTTCTATTGCTTCCTCTTCAAATGGAGGAATACTAATACCTCCAATAGATTAA

Protein sequence

MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTAVTPMRPSVSPTTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKSLFLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQPIICYKLMNTNISPRALRNSNLAQIIEHTDGAVEIKFSEETEKHGKQAKGEIFTQLLPPLEEIEFETIYGEKVKASPFKNISEKEEKNVPTLKNIKNIQLQNNFSNKILSTIANQVEKIEGKISKPSIASSSNGGILIPPID

Homology

[Close]

BLAST of Tan0011803 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-30
Identity = 92/192 (47.92%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSP 60
           MS DQYAMDLG+T V + R+KS+ I IR  MES T PPRPS +LI P   V  MR S S 
Sbjct: 33  MSVDQYAMDLGYTTVIQSRSKSSGIWIRSPMESST-PPRPSVNLIHPFGEVIQMRSSAS- 92

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFD-------- 120
             PSS+++ ST+PTT+ +AV P K+F+P+ EIK+YF+KP+ I +PI+E+E+         
Sbjct: 93  --PSSNRESSTLPTTYSQAVTPDKQFVPRIEIKSYFQKPIVIYDPIIELEYQKNGDLQDI 152

Query: 121 ------EFLNSKSKSLFLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDD-----E 173
                 +FLN K K L   L Q T +AD Q++L+   + +SSS P  S ++ED+     E
Sbjct: 153 DQRKNAKFLNDKLKFL-AALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQEDEEQVDLE 212

[Close]

BLAST of Tan0011803 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-22
Identity = 75/169 (44.38%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 3   ADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSPTT 62
           ADQYAM++GFT V R R++S++I+I    ES T PPRPS +LI P++ V  MRP   P +
Sbjct: 35  ADQYAMEVGFTTVTRSRSRSSNIRIGSLTES-TTPPRPSVNLIHPSSGVVQMRP---PAS 94

Query: 63  PSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKSL 122
           PSS+++ ST  TT+ +AV P KRF+P+PEIK+YF+K + + +PI+E+E+    +S SKS 
Sbjct: 95  PSSNRESSTPSTTYSQAVTPDKRFVPRPEIKSYFQKLIVVYDPIIELEYQINASSSSKS- 154

Query: 123 FLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDS 171
                                    SSS Q  E + D EYD++DPFLDS
Sbjct: 155 ------------------------PSSSIQEDEEQVDPEYDLDDPFLDS 174

[Close]

BLAST of Tan0011803 vs. NCBI nr
Match: KAA0043136.1 (putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-20
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSP 60
           +SADQYAMDLGFT V R  ++S  I I    ES T PPRPS +LIRP++ V  MRP   P
Sbjct: 33  LSADQYAMDLGFTTVTRFISRSFGIWIGSPTESST-PPRPSTNLIRPSSGVVQMRP---P 92

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSK 120
            +PSS+++ ST PTT+ +AV P KRF+P+PEIK+YF+KP+ + +PI+E+E+    + ++ 
Sbjct: 93  ASPSSNRESSTPPTTYSQAVTPDKRFVPRPEIKSYFQKPIVVYDPIIELEYQSLTSEETV 152

Query: 121 SLFLPLAQTTTEADLQK 137
           S   P        DL+K
Sbjct: 153 SKIFPEDFNFLLEDLRK 165

[Close]

BLAST of Tan0011803 vs. NCBI nr
Match: KAA0066421.1 (hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK00863.1 hypothetical protein E5676_scaffold602G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-20
Identity = 71/141 (50.35%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRP-TAVTPMRPSVSP 60
           MSADQYAMDLGFT V R R++S+SI+I  S ES T PPRPSA+LIRP      MRP   P
Sbjct: 1   MSADQYAMDLGFTTVTRSRSRSSSIRIESSTESST-PPRPSANLIRPFGGAVQMRP---P 60

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSK 120
            +PSS+++ ST PTT+ + V P KRF+P+PEIK+YF+K + + + I+E E+      K+ 
Sbjct: 61  ASPSSNRESSTPPTTYSQTVTPDKRFVPRPEIKSYFQKSIVVYDLIIEPEYQSITLEKTV 120

Query: 121 S-LFLPLAQTTTEADLQKILN 140
           S +FL       E DL+K  N
Sbjct: 121 SKIFLDNFNLLPE-DLRKTRN 136

[Close]

BLAST of Tan0011803 vs. NCBI nr
Match: KAA0053156.1 (hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 1.7e-19
Identity = 72/174 (41.38%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSP 60
           MS DQYAM LGFT + + +++S+ I+I    ESLT PPRP A+LIRP+  V  MR    P
Sbjct: 33  MSVDQYAMHLGFTTLTQSKSRSSGIRIGSPTESLT-PPRPLANLIRPSGKVVQMR---FP 92

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSK 120
           T+P S+++ ST PTT+ +AV P KRF+P+ EIK+YF+KP  + +PI+E  +         
Sbjct: 93  TSPLSNRESSTPPTTYSQAVTPDKRFVPRLEIKSYFQKPTVVYDPIIEPGYQ-------- 152

Query: 121 SLFLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQPI 174
                                     +SSS Q  E + D EYD++D FLDSQP+
Sbjct: 153 --------------------------TSSSIQEDEEQVDPEYDLDDSFLDSQPM 168

[Close]

BLAST of Tan0011803 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.8e-31
Identity = 92/192 (47.92%), Postives = 125/192 (65.10%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSP 60
           MS DQYAMDLG+T V + R+KS+ I IR  MES T PPRPS +LI P   V  MR S S 
Sbjct: 33  MSVDQYAMDLGYTTVIQSRSKSSGIWIRSPMESST-PPRPSVNLIHPFGEVIQMRSSAS- 92

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFD-------- 120
             PSS+++ ST+PTT+ +AV P K+F+P+ EIK+YF+KP+ I +PI+E+E+         
Sbjct: 93  --PSSNRESSTLPTTYSQAVTPDKQFVPRIEIKSYFQKPIVIYDPIIELEYQKNGDLQDI 152

Query: 121 ------EFLNSKSKSLFLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDD-----E 173
                 +FLN K K L   L Q T +AD Q++L+   + +SSS P  S ++ED+     E
Sbjct: 153 DQRKNAKFLNDKLKFL-AALVQATIDADFQRLLSTAVNTSSSSKPAPSFIQEDEEQVDLE 212

[Close]

BLAST of Tan0011803 vs. ExPASy TrEMBL
Match: A0A5D3BPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00610 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-22
Identity = 75/169 (44.38%), Postives = 105/169 (62.13%), Query Frame = 0


Query: 3   ADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSPTT 62
           ADQYAM++GFT V R R++S++I+I    ES T PPRPS +LI P++ V  MRP   P +
Sbjct: 35  ADQYAMEVGFTTVTRSRSRSSNIRIGSLTES-TTPPRPSVNLIHPSSGVVQMRP---PAS 94

Query: 63  PSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSKSL 122
           PSS+++ ST  TT+ +AV P KRF+P+PEIK+YF+K + + +PI+E+E+    +S SKS 
Sbjct: 95  PSSNRESSTPSTTYSQAVTPDKRFVPRPEIKSYFQKLIVVYDPIIELEYQINASSSSKS- 154

Query: 123 FLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDS 171
                                    SSS Q  E + D EYD++DPFLDS
Sbjct: 155 ------------------------PSSSIQEDEEQVDPEYDLDDPFLDS 174

[Close]

BLAST of Tan0011803 vs. ExPASy TrEMBL
Match: A0A5A7TM80 (Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00220 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-21
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSP 60
           +SADQYAMDLGFT V R  ++S  I I    ES T PPRPS +LIRP++ V  MRP   P
Sbjct: 33  LSADQYAMDLGFTTVTRFISRSFGIWIGSPTESST-PPRPSTNLIRPSSGVVQMRP---P 92

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSK 120
            +PSS+++ ST PTT+ +AV P KRF+P+PEIK+YF+KP+ + +PI+E+E+    + ++ 
Sbjct: 93  ASPSSNRESSTPPTTYSQAVTPDKRFVPRPEIKSYFQKPIVVYDPIIELEYQSLTSEETV 152

Query: 121 SLFLPLAQTTTEADLQK 137
           S   P        DL+K
Sbjct: 153 SKIFPEDFNFLLEDLRK 165

[Close]

BLAST of Tan0011803 vs. ExPASy TrEMBL
Match: A0A5D3BM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00180 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-20
Identity = 71/141 (50.35%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRP-TAVTPMRPSVSP 60
           MSADQYAMDLGFT V R R++S+SI+I  S ES T PPRPSA+LIRP      MRP   P
Sbjct: 1   MSADQYAMDLGFTTVTRSRSRSSSIRIESSTESST-PPRPSANLIRPFGGAVQMRP---P 60

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSK 120
            +PSS+++ ST PTT+ + V P KRF+P+PEIK+YF+K + + + I+E E+      K+ 
Sbjct: 61  ASPSSNRESSTPPTTYSQTVTPDKRFVPRPEIKSYFQKSIVVYDLIIEPEYQSITLEKTV 120

Query: 121 S-LFLPLAQTTTEADLQKILN 140
           S +FL       E DL+K  N
Sbjct: 121 SKIFLDNFNLLPE-DLRKTRN 136

[Close]

BLAST of Tan0011803 vs. ExPASy TrEMBL
Match: A0A5A7UFZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1248G00100 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.1e-20
Identity = 72/174 (41.38%), Postives = 100/174 (57.47%), Query Frame = 0


Query: 1   MSADQYAMDLGFTQVNRPRTKSASIQIRDSMESLTPPPRPSASLIRPTA-VTPMRPSVSP 60
           MS DQYAM LGFT + + +++S+ I+I    ESLT PPRP A+LIRP+  V  MR    P
Sbjct: 33  MSVDQYAMHLGFTTLTQSKSRSSGIRIGSPTESLT-PPRPLANLIRPSGKVVQMR---FP 92

Query: 61  TTPSSSQQGSTIPTTFVEAVNPPKRFIPKPEIKNYFEKPLQISEPIVEVEFDEFLNSKSK 120
           T+P S+++ ST PTT+ +AV P KRF+P+ EIK+YF+KP  + +PI+E  +         
Sbjct: 93  TSPLSNRESSTPPTTYSQAVTPDKRFVPRLEIKSYFQKPTVVYDPIIEPGYQ-------- 152

Query: 121 SLFLPLAQTTTEADLQKILNQVTSIASSSSPQNSEVEEDDEYDINDPFLDSQPI 174
                                     +SSS Q  E + D EYD++D FLDSQP+
Sbjct: 153 --------------------------TSSSIQEDEEQVDPEYDLDDSFLDSQPM 168

The following BLAST results are available for this feature:

BLAST of Tan0011803 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0011803 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98361.1	1.6e-30	47.92	hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]	[more]
KAA0066384.1	3.6e-22	44.38	hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK0090...	[more]
KAA0043136.1	2.0e-20	48.18	putative Retrotransposon protein [Cucumis melo var. makuwa] >TYK23922.1 putative...	[more]
KAA0066421.1	2.6e-20	50.35	hypothetical protein E6C27_scaffold21G005030 [Cucumis melo var. makuwa] >TYK0086...	[more]
KAA0053156.1	1.7e-19	41.38	hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]	[more]

BLAST of Tan0011803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BI61	7.8e-31	47.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BPD3	1.7e-22	44.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TM80	9.6e-21	48.18	Putative Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5D3BM67	1.2e-20	50.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UFZ9	8.1e-20	41.38	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Tan0011803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011803.1	Tan0011803.1	mRNA