Tan0011744 (gene) Snake gourd v1

Overview
NameTan0011744
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG04: 72839275 .. 72841207 (-)
RNA-Seq ExpressionTan0011744
SyntenyTan0011744
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGAGGCCACCACTCTTCCTCCTCCCCAGTCGTCTTCCTCTACCGCCGTGGTTGCCACCGGTGTTAAAACCTAGCCACGACGATGGCTGCAACGACGCTGATGATACCCGCCACCGTAGCGGTCGTGATTTTGCTGCTCATCCCGACCAGTTGCTATGCTTTTACAGCTTCCAAACCACTTTTCAACCTCACTTCGGGTGAGTTTGGAATAACTTTTGAAAGGATAAAAAGGGCTTATAATTGTTGATGTATATTTTTCAATCTTTTTTATCAGTTTGGTTACTTACTCGGGATATAGAGAGGGATTTTAAATGAACTTTGATATTTTTTATCCTTTCAAATAGGATTTTATTTTTGCTTTAAAAGTTTCTGGAGGAGAAGAGTTTATTTAATTTCATCAGTTCTTATATAATTTCATGATAATTTATAGCTAATGTAATATTTTCTTATTTTAGTTCTCCATTAATAAGTTAGGATTGATAGGTTTCATTGATAAACTTTTTCTTATGATTAATAGGTTTCATTGATAAACTTTCTCTCTTTTTTCTAGCAAACACCCAAACAAAAGAATTATTACATCAATTTCTGAATTCAAACAATATTTAATAGTTTAAAATTATTTTTAGTATCTCAAATCATGACACTTTTTACTGGGGGAAGATTGAATCTCTAGCCTCTTGGTTGATCATACCTATCAATTTTTAAACTCTGATTACTTTGACTTCAAATCACTCCACTTAGAAATCACTTCATTAAAGCCTATTTGATAACCATTTGATTTTTTAATATTAAGTTTATAAATAACTATTTCTATCTATGACTTTTCATGTTTTCTTATGTACTTGTTTTAAAAAACCAAACCAAATTTTAAAAATTAAAAAAAATAGTTTTTAAAAATTTGTTTTTGTTTTTGGAGTGTAGTTAAGAATTCAAGTGTTTTCGTAAGAAAGATAGAAACCATGATAGAGAAGATGAAAACCAATCATGGTAGAGAAATGGTGAGGAAACAAAAACAAATTTCAAAAATACAAAACGGAGGCCCCGTTTGATAGCCATTTGGTTTTTTATTTTTGGTTTTTGAAAATTATGCTTGTTTTTTTCACAACTGCTTTTCATATTCTCTACAATTAGTTTGATTTTACTTAAGGTACCATTTAAGTTTCTAGTCAAATTTCGAAAAACAAAATCAAATTTTTGAAAACTATTTTTTTTTTTAGTTTTTAAAATTTAGCTTAGTTTTTAAAATCATAGGTACAAAGTGTATAAGAAAACATAAAAACTCATAAGTAGATGTAGTATTTTTAAGATTAATTTTCAAAAACTAAGAACTAAAAATTAAATGTGACCTAAATGATTATCAAACAAGACTTAATTTTTTCATTTCAAATTGAGGTTGAACATTCACTTACATAATCAAAAATTATTTTGAAAATTATAAAAAACTAAAAGAAAATGCTTATAGAAAAAGTAATTTCTCTCCAAAACAAGACATCTGGGAACTCACCTGCAACTGGTGTATGCCCTAGGTACTGGAAAACGCCTCATCGGAGACGATATCGACACGGAGTATCTAATGGAGTCACATATCAGCCGGATTCTAGCAGAGGAGGAGCTAAGGTTCGAAACGATGAGGACGCCCAACGCCAACATGGCTTCGGTGGTCGACTGTGAACGACCACCGCGCTACGACAGTTGCCTCGGCGAAGGAAGGCAAAATCCGCCGTCGGAAAACTGTGACCCCTTCAATCGCGCCAATCCTTGTTAATTAGAATGAAAGAAAGAAACAAGAATAGCTTCATTATATTATGATTTGGGGTTTACAGCATTTTTAAGGAAATAATAATTAATGTAATGAACACATATATAGTGGTAAGTAACAACGTTTATATATGTAATATGTTGTTTCATCAAATATGTGATTATTATTATTAA

mRNA sequence

AGAGAGGCCACCACTCTTCCTCCTCCCCAGTCGTCTTCCTCTACCGCCGTGGTTGCCACCGGTGTTAAAACCTAGCCACGACGATGGCTGCAACGACGCTGATGATACCCGCCACCGTAGCGGTCGTGATTTTGCTGCTCATCCCGACCAGTTGCTATGCTTTTACAGCTTCCAAACCACTTTTCAACCTCACTTCGGGTACTGGAAAACGCCTCATCGGAGACGATATCGACACGGAGTATCTAATGGAGTCACATATCAGCCGGATTCTAGCAGAGGAGGAGCTAAGGTTCGAAACGATGAGGACGCCCAACGCCAACATGGCTTCGGTGGTCGACTGTGAACGACCACCGCGCTACGACAGTTGCCTCGGCGAAGGAAGGCAAAATCCGCCGTCGGAAAACTGTGACCCCTTCAATCGCGCCAATCCTTGTTAATTAGAATGAAAGAAAGAAACAAGAATAGCTTCATTATATTATGATTTGGGGTTTACAGCATTTTTAAGGAAATAATAATTAATGTAATGAACACATATATAGTGGTAAGTAACAACGTTTATATATGTAATATGTTGTTTCATCAAATATGTGATTATTATTATTAA

Coding sequence (CDS)

ATGGCTGCAACGACGCTGATGATACCCGCCACCGTAGCGGTCGTGATTTTGCTGCTCATCCCGACCAGTTGCTATGCTTTTACAGCTTCCAAACCACTTTTCAACCTCACTTCGGGTACTGGAAAACGCCTCATCGGAGACGATATCGACACGGAGTATCTAATGGAGTCACATATCAGCCGGATTCTAGCAGAGGAGGAGCTAAGGTTCGAAACGATGAGGACGCCCAACGCCAACATGGCTTCGGTGGTCGACTGTGAACGACCACCGCGCTACGACAGTTGCCTCGGCGAAGGAAGGCAAAATCCGCCGTCGGAAAACTGTGACCCCTTCAATCGCGCCAATCCTTGTTAA

Protein sequence

MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHISRILAEEELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC
Homology
BLAST of Tan0011744 vs. NCBI nr
Match: XP_022998176.1 (uncharacterized protein LOC111492901 [Cucurbita maxima])

HSP 1 Score: 188.3 bits (477), Expect = 3.6e-44
Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAAT  M PAT+AVVILLL+ T+C AF  +KPLFN T G GK +IGDDIDTE+LMESHIS
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILAEE-ELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           R+LAEE ELRFETMR+PN N+ASVVDCERPPRYDSCLGEG+ NPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Tan0011744 vs. NCBI nr
Match: KAG6607027.1 (hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 186.0 bits (471), Expect = 1.8e-43
Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAAT  M PAT+AVVILLL+ T C AF  +KPLFN T G GK +IGDDIDTE+LMESHIS
Sbjct: 58  MAATMPMKPATIAVVILLLVSTGCDAFARTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 117

Query: 61  RILAEE-ELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           R+LAEE ELRFETMR+PN N+ASVVDCERPPR+DSCLGEG+ NPPSENCDPFNRANPC
Sbjct: 118 RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 175

BLAST of Tan0011744 vs. NCBI nr
Match: XP_022948337.1 (uncharacterized protein LOC111452043 [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 5.3e-43
Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAAT  M P T+AVVILLL+ T C AF  +KPLFN T G GK +IGDDIDTE+LMESHIS
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILAEE-ELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           R+LAEE ELRFETMR+PN N+ASVVDCERPPR+DSCLGEG+ NPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Tan0011744 vs. NCBI nr
Match: KAG7036723.1 (hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.1 bits (466), Expect = 6.9e-43
Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAAT  M PAT+AVVILLL+ T C AF  +KPLFN T G GK +IGDDID E+LMESHIS
Sbjct: 1   MAATMPMKPATIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDNEFLMESHIS 60

Query: 61  RILAEE-ELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           R+LAEE ELRFETMR+PN N+ASVVDCERPPR+DSCLGEG+ NPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Tan0011744 vs. NCBI nr
Match: XP_022143399.1 (uncharacterized protein LOC111013278 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 3.3e-29
Identity = 78/119 (65.55%), Postives = 86/119 (72.27%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLF-NLTSGTGKRLIGD-DIDTEYLMESH 60
           MA   +MIP  +A+ ILL  P  C A T SK L  N T G  KRLIGD DI +E+LME H
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  ISRILAEEELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           +SRILA E LRF+TM TPNANM SV DCERPPRYDSCLGE R  PP+ENC  FNRANPC
Sbjct: 61  LSRILA-ESLRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

BLAST of Tan0011744 vs. ExPASy TrEMBL
Match: A0A6J1K9J3 (uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44
Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAAT  M PAT+AVVILLL+ T+C AF  +KPLFN T G GK +IGDDIDTE+LMESHIS
Sbjct: 1   MAATMSMKPATIAVVILLLVSTNCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILAEE-ELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           R+LAEE ELRFETMR+PN N+ASVVDCERPPRYDSCLGEG+ NPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRYDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Tan0011744 vs. ExPASy TrEMBL
Match: A0A6J1G8W5 (uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC111452043 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 92/118 (77.97%), Postives = 102/118 (86.44%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAAT  M P T+AVVILLL+ T C AF  +KPLFN T G GK +IGDDIDTE+LMESHIS
Sbjct: 1   MAATMPMKPTTIAVVILLLVSTGCDAFALTKPLFNHTQGPGKHVIGDDIDTEFLMESHIS 60

Query: 61  RILAEE-ELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           R+LAEE ELRFETMR+PN N+ASVVDCERPPR+DSCLGEG+ NPPSENCDPFNRANPC
Sbjct: 61  RVLAEEDELRFETMRSPNPNIASVVDCERPPRFDSCLGEGKNNPPSENCDPFNRANPC 118

BLAST of Tan0011744 vs. ExPASy TrEMBL
Match: A0A0A0L9X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 89/117 (76.07%), Postives = 99/117 (84.62%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGDDIDTEYLMESHIS 60
           MAA TL I  T+A+V LLL+   C AF ASKP+FNL+S  GKRLIG DIDT++LMESH+S
Sbjct: 1   MAAATLSIRTTLAIVTLLLVAVGCDAFIASKPVFNLSSDLGKRLIG-DIDTDFLMESHVS 60

Query: 61  RILAEEELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           RILA  ELRFETMRTPNAN ASVV+CERPPRYDSCLGE R NPPSENCDP+NRANPC
Sbjct: 61  RILA--ELRFETMRTPNANSASVVNCERPPRYDSCLGEARDNPPSENCDPYNRANPC 114

BLAST of Tan0011744 vs. ExPASy TrEMBL
Match: A0A6J1CP71 (uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013278 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 78/119 (65.55%), Postives = 86/119 (72.27%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLF-NLTSGTGKRLIGD-DIDTEYLMESH 60
           MA   +MIP  +A+ ILL  P  C A T SK L  N T G  KRLIGD DI +E+LME H
Sbjct: 1   MATAAVMIPTVMALAILLPNPIDCDALTTSKRLLNNETWGNHKRLIGDEDIGSEFLMELH 60

Query: 61  ISRILAEEELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           +SRILA E LRF+TM TPNANM SV DCERPPRYDSCLGE R  PP+ENC  FNRANPC
Sbjct: 61  LSRILA-ESLRFQTMTTPNANMGSVRDCERPPRYDSCLGEKRNTPPAENCGTFNRANPC 118

BLAST of Tan0011744 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.8e-28
Identity = 75/118 (63.56%), Postives = 86/118 (72.88%), Query Frame = 0

Query: 1   MAATTLMIPATVAVVILLLIPTSCYAFTASKPLFNLTSGTGKRLIGD-DIDTEYLMESHI 60
           MAA  +MIPA +A++ILLL PTS  A T  KPL N TS  GK LIGD DID+E+LMESHI
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKPLNNDTSAAGKYLIGDQDIDSEFLMESHI 60

Query: 61  SRILAEEELRFETMRTPNANMASVVDCERPPRYDSCLGEGRQNPPSENCDPFNRANPC 118
           SRILA  +  F+T +T +AN AS   CERPPRYDSCLG+   NPP ENC  FNR NPC
Sbjct: 61  SRILAGSQ-DFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022998176.13.6e-4479.66uncharacterized protein LOC111492901 [Cucurbita maxima][more]
KAG6607027.11.8e-4378.81hypothetical protein SDJN03_00369, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948337.15.3e-4377.97uncharacterized protein LOC111452043 [Cucurbita moschata][more]
KAG7036723.16.9e-4377.97hypothetical protein SDJN02_00343, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022143399.13.3e-2965.55uncharacterized protein LOC111013278 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1K9J31.8e-4479.66uncharacterized protein LOC111492901 OS=Cucurbita maxima OX=3661 GN=LOC111492901... [more]
A0A6J1G8W52.5e-4377.97uncharacterized protein LOC111452043 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A0A0L9X51.3e-3976.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298070 PE=4 SV=1[more]
A0A6J1CP711.6e-2965.55uncharacterized protein LOC111013278 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1KBP58.8e-2863.56uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0011744.1Tan0011744.1mRNA