Tan0011719 (gene) Snake gourd v1

Overview


Name	Tan0011719
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Glial fibrillary acidic protein-like
Location	LG06: 12288320 .. 12289090 (-)
RNA-Seq Expression	Tan0011719
Synteny	Tan0011719

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAAATGAGGAATTAAGGGTTGAAGTTAAATTATGGATTGGACAATCCACAAGCGCGAAAAGACAGTTGGAAGAAGTTCAACAGCGTTTACAGAGGCAGCTTGAATTAGAGAGGGAAAACGGTTCTCCAAACGTAGAAGTCGTCCAACTACGAAAGAAAAATAGGGGCTTGTGGAGAGAAATAGAAGTCCTACAAGGTGAGGCAGAGGCTCAGAAATTACACATCAAAGACCTGAAGCAAGAGGTACGGAAGCTCAACAATGTCATGAAAAACTTCCAAGATATACTTAACGAACAAGTTACAAAGTCACAGGAGACAATTGTGTCTTTGGAAAAAGAAAAGGAAGTTTTGCAAAAGCTGACAGATGAGTATAAGAGCCAATTCGTCGATGTAGAACGGAGAAACACACTGCTTCAAGATACTATTGCAAGTTTGGAGCACCAGTTGGTAGTATATCAAAATGCGAACGAAGTAGTGATGGAAGATCATGCACGATTAAAAGAAGAGCATCAGGTGATGAATACAAACTTTGCCATTTGGAGAGACGAGTATGGAAATCTGAGACGCCGTTATGACTACATAAAAGGACAAGTTGAACAAGGAGCCGAGAAGTTAAGATTGATGGCTAGAAAGGCTGATCGATTAGCTGAAAGAGCCAGTATTCTTCGACAAGGCATCGTTCCCACACAGCCAGGCGGTGAAGATTTGATTAGATTCCTATGGGTGATAGGACGAGACCTCGGGCATTTTGGGTGTTACCATTAG

mRNA sequence

ATGAAGGAAAATGAGGAATTAAGGGTTGAAGTTAAATTATGGATTGGACAATCCACAAGCGCGAAAAGACAGTTGGAAGAAGTTCAACAGCGTTTACAGAGGCAGCTTGAATTAGAGAGGGAAAACGGTTCTCCAAACGTAGAAGTCGTCCAACTACGAAAGAAAAATAGGGGCTTGTGGAGAGAAATAGAAGTCCTACAAGGTGAGGCAGAGGCTCAGAAATTACACATCAAAGACCTGAAGCAAGAGGTACGGAAGCTCAACAATGTCATGAAAAACTTCCAAGATATACTTAACGAACAAGTTACAAAGTCACAGGAGACAATTGTGTCTTTGGAAAAAGAAAAGGAAGTTTTGCAAAAGCTGACAGATGAGTATAAGAGCCAATTCGTCGATGTAGAACGGAGAAACACACTGCTTCAAGATACTATTGCAAGTTTGGAGCACCAGTTGGTAGTATATCAAAATGCGAACGAAGTAGTGATGGAAGATCATGCACGATTAAAAGAAGAGCATCAGGTGATGAATACAAACTTTGCCATTTGGAGAGACGAGTATGGAAATCTGAGACGCCGTTATGACTACATAAAAGGACAAGTTGAACAAGGAGCCGAGAAGTTAAGATTGATGGCTAGAAAGGCTGATCGATTAGCTGAAAGAGCCAGTATTCTTCGACAAGGCATCGTTCCCACACAGCCAGGCGGTGAAGATTTGATTAGATTCCTATGGGTGATAGGACGAGACCTCGGGCATTTTGGGTGTTACCATTAG

Coding sequence (CDS)

ATGAAGGAAAATGAGGAATTAAGGGTTGAAGTTAAATTATGGATTGGACAATCCACAAGCGCGAAAAGACAGTTGGAAGAAGTTCAACAGCGTTTACAGAGGCAGCTTGAATTAGAGAGGGAAAACGGTTCTCCAAACGTAGAAGTCGTCCAACTACGAAAGAAAAATAGGGGCTTGTGGAGAGAAATAGAAGTCCTACAAGGTGAGGCAGAGGCTCAGAAATTACACATCAAAGACCTGAAGCAAGAGGTACGGAAGCTCAACAATGTCATGAAAAACTTCCAAGATATACTTAACGAACAAGTTACAAAGTCACAGGAGACAATTGTGTCTTTGGAAAAAGAAAAGGAAGTTTTGCAAAAGCTGACAGATGAGTATAAGAGCCAATTCGTCGATGTAGAACGGAGAAACACACTGCTTCAAGATACTATTGCAAGTTTGGAGCACCAGTTGGTAGTATATCAAAATGCGAACGAAGTAGTGATGGAAGATCATGCACGATTAAAAGAAGAGCATCAGGTGATGAATACAAACTTTGCCATTTGGAGAGACGAGTATGGAAATCTGAGACGCCGTTATGACTACATAAAAGGACAAGTTGAACAAGGAGCCGAGAAGTTAAGATTGATGGCTAGAAAGGCTGATCGATTAGCTGAAAGAGCCAGTATTCTTCGACAAGGCATCGTTCCCACACAGCCAGGCGGTGAAGATTTGATTAGATTCCTATGGGTGATAGGACGAGACCTCGGGCATTTTGGGTGTTACCATTAG

Protein sequence

MKENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHFGCYH

Homology

[Close]

BLAST of Tan0011719 vs. NCBI nr
Match: KAA0065294.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-54
Identity = 119/254 (46.85%), Postives = 176/254 (69.29%), Query Frame = 0


Query: 3   ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWRE 62
           ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R 
Sbjct: 8   ENEKLREEVKKWVQQAVNTQRDLDEAK---RKRLELEKENDSLNTEAIQMRKKNKRLLRN 67

Query: 63  IEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKL 122
           I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ   SQ+T + +    EVLQ L
Sbjct: 68  IANLHEEIEAKKVCITDLKHEIEKLNGIALEFQNALHEQAISSQQTAMGI----EVLQHL 127

Query: 123 TDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIW 182
            +EYKSQ ++ + +N  LQ  + S E QL++ + A EV+++D+A+L E++Q M+ +F +W
Sbjct: 128 IEEYKSQLIEADSKNNFLQKAVNSSESQLLICRKAREVIIDDYAQLMEKYQEMSIDFMMW 187

Query: 183 RDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFL 242
           +DEY  LRR+YD   G++E+GAEKLR MAR AD+ + +A  LRQG++PT+   ++L  FL
Sbjct: 188 KDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFL 247

Query: 243 WVIGRDLGHFGCYH 257
            +IG+ LG FGCYH
Sbjct: 248 GIIGQCLGRFGCYH 254

[Close]

BLAST of Tan0011719 vs. NCBI nr
Match: KAA0025321.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 216.1 bits (549), Expect = 3.6e-52
Identity = 118/254 (46.46%), Postives = 172/254 (67.72%), Query Frame = 0


Query: 3   ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWRE 62
           ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R 
Sbjct: 8   ENEKLREEVKKWVQQAVNIQRDLDEAK---RKRLELEKENDSLNTEAIQVRKKNKRLLRN 67

Query: 63  IEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKL 122
           I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ   SQ+T + +    EVLQ  
Sbjct: 68  IANLHEEIEAEKVCITDLKHEIEKLNGITLEFQNALHEQAISSQQTAMGI----EVLQHS 127

Query: 123 TDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIW 182
            +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W
Sbjct: 128 IEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQEMSIDFMMW 187

Query: 183 RDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFL 242
           +DEY  LRR+YD    ++E+GAEKLR MA  AD+ + +A  LRQG++PT+   E+L  FL
Sbjct: 188 KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDIDEELSHFL 247

Query: 243 WVIGRDLGHFGCYH 257
            +IG+ LG FGCYH
Sbjct: 248 GIIGQCLGRFGCYH 254

[Close]

BLAST of Tan0011719 vs. NCBI nr
Match: KAA0033848.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa] >TYK01230.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-39
Identity = 98/206 (47.57%), Postives = 135/206 (65.53%), Query Frame = 0


Query: 51  QLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIV 110
           +LR+ N+ L  E E L+ E  ++  H K+LK E+  ++ V  +FQ  L EQ T +Q    
Sbjct: 47  RLREMNQVLEPENEGLREEVNSKGEH-KELKHELESVSKVFVDFQSALVEQGTSTQRITA 106

Query: 111 SLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKE 170
            +    E+LQ  T EYK +  + + +N LLQ+ +AS EHQL++ +NA EVV EDHARLK 
Sbjct: 107 GI----EILQNSTKEYKIRITEEQCKNALLQEAVASSEHQLLICRNAREVVTEDHARLKN 166

Query: 171 EHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVP 230
           EH+ +  +FAIWRDEY  +R +Y+ +KGQ+EQG +KLR MARKAD+ + R   L+Q IVP
Sbjct: 167 EHKEVLADFAIWRDEYNIMRHKYEDVKGQIEQGPKKLRHMARKADQFSTRTIALQQDIVP 226

Query: 231 TQPGGEDLIRFLWVIGRDLGHFGCYH 257
            Q G  +L RFL +IG  LG FGCYH
Sbjct: 227 IQRGSRELSRFLGIIGHYLGCFGCYH 247

[Close]

BLAST of Tan0011719 vs. NCBI nr
Match: XP_008464352.1 (PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo])

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-33
Identity = 94/224 (41.96%), Postives = 139/224 (62.05%), Query Frame = 0


Query: 3   ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWRE 62
           ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R 
Sbjct: 34  ENEKLREEVKKWVQQAVNTQRDLDEAK---RKRLELEKENDSLNTEAIQVRKKNKRLLRN 93

Query: 63  IEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKL 122
           I  L  E EA+                  K FQ+ L+EQ   SQ+T + +    EVLQ  
Sbjct: 94  IANLHEEIEAE------------------KEFQNALHEQAISSQQTAMGI----EVLQHS 153

Query: 123 TDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIW 182
            +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W
Sbjct: 154 IEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQEMSIDFMMW 213

Query: 183 RDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQ 227
           +DEY  LRR+YD    ++E+GAEKLR MA  AD+ + +A  LRQ
Sbjct: 214 KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQ 232

[Close]

BLAST of Tan0011719 vs. NCBI nr
Match: KAA0046606.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-33
Identity = 95/244 (38.93%), Postives = 142/244 (58.20%), Query Frame = 0


Query: 13  LWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEA 72
           +WI   +S  R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA
Sbjct: 265 IWI---SSHLRDLDEAK---RKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA 324

Query: 73  QKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVD 132
           +K                                 T + +    EVLQ   +EYKSQ ++
Sbjct: 325 KK---------------------------------TAMGI----EVLQHSIEEYKSQLIE 384

Query: 133 VERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRR 192
            E +N  LQ  + S E QL++ + A +V+ +D+A+L E++Q M+ +F +W+DEY  LRR+
Sbjct: 385 AESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQEMSIDFMMWKDEYETLRRK 444

Query: 193 YDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHF 252
           YD   G++E+GAEKLR MAR AD+ + +A  LRQG++PT+   ++L  FL +IG+ LG F
Sbjct: 445 YDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRF 465

Query: 253 GCYH 257
            CYH
Sbjct: 505 RCYH 465

[Close]

BLAST of Tan0011719 vs. ExPASy TrEMBL
Match: A0A5A7VDD9 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00070 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 119/254 (46.85%), Postives = 176/254 (69.29%), Query Frame = 0


Query: 3   ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWRE 62
           ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R 
Sbjct: 8   ENEKLREEVKKWVQQAVNTQRDLDEAK---RKRLELEKENDSLNTEAIQMRKKNKRLLRN 67

Query: 63  IEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKL 122
           I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ   SQ+T + +    EVLQ L
Sbjct: 68  IANLHEEIEAKKVCITDLKHEIEKLNGIALEFQNALHEQAISSQQTAMGI----EVLQHL 127

Query: 123 TDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIW 182
            +EYKSQ ++ + +N  LQ  + S E QL++ + A EV+++D+A+L E++Q M+ +F +W
Sbjct: 128 IEEYKSQLIEADSKNNFLQKAVNSSESQLLICRKAREVIIDDYAQLMEKYQEMSIDFMMW 187

Query: 183 RDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFL 242
           +DEY  LRR+YD   G++E+GAEKLR MAR AD+ + +A  LRQG++PT+   ++L  FL
Sbjct: 188 KDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFL 247

Query: 243 WVIGRDLGHFGCYH 257
            +IG+ LG FGCYH
Sbjct: 248 GIIGQCLGRFGCYH 254

[Close]

BLAST of Tan0011719 vs. ExPASy TrEMBL
Match: A0A5A7SM49 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23528G00010 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 118/254 (46.46%), Postives = 172/254 (67.72%), Query Frame = 0


Query: 3   ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWRE 62
           ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R 
Sbjct: 8   ENEKLREEVKKWVQQAVNIQRDLDEAK---RKRLELEKENDSLNTEAIQVRKKNKRLLRN 67

Query: 63  IEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKL 122
           I  L  E EA+K+ I DLK E+ KLN +   FQ+ L+EQ   SQ+T + +    EVLQ  
Sbjct: 68  IANLHEEIEAEKVCITDLKHEIEKLNGITLEFQNALHEQAISSQQTAMGI----EVLQHS 127

Query: 123 TDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIW 182
            +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W
Sbjct: 128 IEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQEMSIDFMMW 187

Query: 183 RDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFL 242
           +DEY  LRR+YD    ++E+GAEKLR MA  AD+ + +A  LRQG++PT+   E+L  FL
Sbjct: 188 KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQGVIPTRDIDEELSHFL 247

Query: 243 WVIGRDLGHFGCYH 257
            +IG+ LG FGCYH
Sbjct: 248 GIIGQCLGRFGCYH 254

[Close]

BLAST of Tan0011719 vs. ExPASy TrEMBL
Match: A0A5D3BQ93 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00080 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 5.8e-40
Identity = 98/206 (47.57%), Postives = 135/206 (65.53%), Query Frame = 0


Query: 51  QLRKKNRGLWREIEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIV 110
           +LR+ N+ L  E E L+ E  ++  H K+LK E+  ++ V  +FQ  L EQ T +Q    
Sbjct: 47  RLREMNQVLEPENEGLREEVNSKGEH-KELKHELESVSKVFVDFQSALVEQGTSTQRITA 106

Query: 111 SLEKEKEVLQKLTDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKE 170
            +    E+LQ  T EYK +  + + +N LLQ+ +AS EHQL++ +NA EVV EDHARLK 
Sbjct: 107 GI----EILQNSTKEYKIRITEEQCKNALLQEAVASSEHQLLICRNAREVVTEDHARLKN 166

Query: 171 EHQVMNTNFAIWRDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVP 230
           EH+ +  +FAIWRDEY  +R +Y+ +KGQ+EQG +KLR MARKAD+ + R   L+Q IVP
Sbjct: 167 EHKEVLADFAIWRDEYNIMRHKYEDVKGQIEQGPKKLRHMARKADQFSTRTIALQQDIVP 226

Query: 231 TQPGGEDLIRFLWVIGRDLGHFGCYH 257
            Q G  +L RFL +IG  LG FGCYH
Sbjct: 227 IQRGSRELSRFLGIIGHYLGCFGCYH 247

[Close]

BLAST of Tan0011719 vs. ExPASy TrEMBL
Match: A0A5A7TXA1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001520 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.2e-34
Identity = 95/244 (38.93%), Postives = 142/244 (58.20%), Query Frame = 0


Query: 13  LWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWREIEVLQGEAEA 72
           +WI   +S  R L+E +   +++LELE+EN S N E +Q+RKKN+ L R I  L  E EA
Sbjct: 265 IWI---SSHLRDLDEAK---RKRLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEA 324

Query: 73  QKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKLTDEYKSQFVD 132
           +K                                 T + +    EVLQ   +EYKSQ ++
Sbjct: 325 KK---------------------------------TAMGI----EVLQHSIEEYKSQLIE 384

Query: 133 VERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIWRDEYGNLRRR 192
            E +N  LQ  + S E QL++ + A +V+ +D+A+L E++Q M+ +F +W+DEY  LRR+
Sbjct: 385 AESKNNFLQKAVNSSESQLLICRKARKVITDDYAQLIEKYQEMSIDFMMWKDEYETLRRK 444

Query: 193 YDYIKGQVEQGAEKLRLMARKADRLAERASILRQGIVPTQPGGEDLIRFLWVIGRDLGHF 252
           YD   G++E+GAEKLR MAR AD+ + +A  LRQG++PT+   ++L  FL +IG+ LG F
Sbjct: 445 YDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKELSHFLGIIGQCLGRF 465

Query: 253 GCYH 257
            CYH
Sbjct: 505 RCYH 465

[Close]

BLAST of Tan0011719 vs. ExPASy TrEMBL
Match: A0A1S3CLQ1 (glial fibrillary acidic protein-like OS=Cucumis melo OX=3656 GN=LOC103502260 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 6.2e-34
Identity = 94/224 (41.96%), Postives = 139/224 (62.05%), Query Frame = 0


Query: 3   ENEELRVEVKLWIGQSTSAKRQLEEVQQRLQRQLELERENGSPNVEVVQLRKKNRGLWRE 62
           ENE+LR EVK W+ Q+ + +R L+E +   +++LELE+EN S N E +Q+RKKN+ L R 
Sbjct: 34  ENEKLREEVKKWVQQAVNTQRDLDEAK---RKRLELEKENDSLNTEAIQVRKKNKRLLRN 93

Query: 63  IEVLQGEAEAQKLHIKDLKQEVRKLNNVMKNFQDILNEQVTKSQETIVSLEKEKEVLQKL 122
           I  L  E EA+                  K FQ+ L+EQ   SQ+T + +    EVLQ  
Sbjct: 94  IANLHEEIEAE------------------KEFQNALHEQAISSQQTAMGI----EVLQHS 153

Query: 123 TDEYKSQFVDVERRNTLLQDTIASLEHQLVVYQNANEVVMEDHARLKEEHQVMNTNFAIW 182
            +EYKSQ ++ E +N  LQ  + S E QL++ + A EV+ +D+A+L E++Q M+ +F +W
Sbjct: 154 IEEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQEMSIDFMMW 213

Query: 183 RDEYGNLRRRYDYIKGQVEQGAEKLRLMARKADRLAERASILRQ 227
           +DEY  LRR+YD    ++E+GAEKLR MA  AD+ + +A  LRQ
Sbjct: 214 KDEYETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQ 232

The following BLAST results are available for this feature:

BLAST of Tan0011719 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0011719 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065294.1	2.9e-54	46.85	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0025321.1	3.6e-52	46.46	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0033848.1	1.2e-39	47.57	glial fibrillary acidic protein-like [Cucumis melo var. makuwa] >TYK01230.1 glia...	[more]
XP_008464352.1	1.3e-33	41.96	PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]	[more]
KAA0046606.1	1.3e-33	38.93	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]

BLAST of Tan0011719 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDD9	1.4e-54	46.85	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7SM49	1.7e-52	46.46	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BQ93	5.8e-40	47.57	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TXA1	6.2e-34	38.93	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CLQ1	6.2e-34	41.96	glial fibrillary acidic protein-like OS=Cucumis melo OX=3656 GN=LOC103502260 PE=...	[more]

BLAST of Tan0011719 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..129
None	No IPR available	COILS	Coil	Coil	coord: 18..42

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011719.1	Tan0011719.1	mRNA