Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCATCTTCAACCTCTAGCCACTCTCATTCATCAAATCCTTCCATAGAATCCTCCTCCTCTACTTTTGAAGATGATTCCAAACCTCTATGGCAATATGTGACTAAGATTAAAAAATTGAGTGATGGGGGTGGAAACTTTTTATGGCAATGCAATTTTTGTCACGCCACAAAAAAAGAGCTCTTATACAAGAGTTAGGGCTCATTTGTTGAAGATAAATGGTCAAGGGATTGGAATGTGTCTAAAAGTCACTCCTAA mRNA sequence ATGGCATCTTCAACCTCTAGCCACTCTCATTCATCAAATCCTTCCATAGAATCCTCCTCCTCTACTTTTGAAGATGATTCCAAACCTCTATGGCAATATGTGACTAAGATTAAAAAATTGAGTGATGGGGATAAATGGTCAAGGGATTGGAATGTGTCTAAAAGTCACTCCTAA Coding sequence (CDS) ATGGCATCTTCAACCTCTAGCCACTCTCATTCATCAAATCCTTCCATAGAATCCTCCTCCTCTACTTTTGAAGATGATTCCAAACCTCTATGGCAATATGTGACTAAGATTAAAAAATTGAGTGATGGGGATAAATGGTCAAGGGATTGGAATGTGTCTAAAAGTCACTCCTAA Protein sequence MASSTSSHSHSSNPSIESSSSTFEDDSKPLWQYVTKIKKLSDGDKWSRDWNVSKSHS
Homology
BLAST of Tan0011653 vs. ExPASy TrEMBL
Match: A0A0A0K5G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G220330 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 8.7e-05 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 0
Query: 16 IESSSSTFEDDSKPLWQYVTKIKKLSDG-------------DKWSRDWNVSKSHS 58
+E++SST EDDSK LWQYV KIKKLSDG D WSR+W +SK +S
Sbjct: 1 METNSSTVEDDSKSLWQYVIKIKKLSDGEELIYKSESSLAEDSWSRNWVMSKGYS 55
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K5G7 | 8.7e-05 | 54.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G220330 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..26 |
Relationships
The following mRNA feature(s) are a part of this gene:
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