Tan0011500 (gene) Snake gourd v1

Overview


Name	Tan0011500
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cold-regulated 413 inner membrane protein 1, chloroplastic-like
Location	LG05: 77085495 .. 77087250 (+)
RNA-Seq Expression	Tan0011500
Synteny	Tan0011500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGTGCATCTCTGTCTTCTGCTATTTCAATTTACACTCCCTCTCTCTGCAAATCCAAGCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCTCTCCTTGAATCCTGCCGCTAAACAGACTTCGATTTGTTATAATCCGCTCAGGTAATTTCAGGCTCCGGAATCATGCCAGTTCCAGTGAGTAGTGATTTCGGTTTAAAAATTTGTCAGTATTGTTCAAAAAGAAAAGTTGTTTGACTAGGTTTGCTGTCGGTAGCGACGGGATTTCGACGGCGGCGATTACCAAGAAGAGGAGACGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTACTGCCCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGTAATTATTCTCTCTCGATCGTGCATACTTACATACAAGTTCTTTAAGCGAGAATGTGGGAGATAAGCATCATCGTTTCTAGTATATGATTTTTCCAAATTGTGCCGTTAATTGTCGATGTTTTGCTCTCTCAACAATGGATTTTACGACTTGCAATCTTCGAGACACGATTCTGTAGAATCAGGACTGAATACTCAACTTTAACCAGTACTCAGATGAGTTTTTAAATGTTTTGCTAAAATTCTTTTGCTTCTGCGATGTAATTAATTGCGTTTAAACTGATAACATTCCGTGGCTACTTTTACATCTCCAACCGTCAAGATGTCACCACGTTCACCTTGATCTGCTGTTTTAGAGTCCATTGCACGTATCAAAGTATAATTTTAAAACCCTAGACTTCTTCTCCAGGGTTTTAATGCTCGCAAGGGGAACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTCATCTCGTGGATTAAGTAAGCCTCGTAAAAGCTCTCTATATTGTACTATCCCTATTCACTATTTGATCACAAACATACTTCGAATATCTTCAAGAAGTTTCTTTTTAAATAAATCATCTTCAAGAAGTTTAATCTAAGTTGTTCTAAGGCCAAATTTGCCATATGATGCTATCTAAGGCCAAATTTGCCATATAATGCTAAGGCTCTTCAACAGTAGCTATCAGCAAGATTTCTGAGCTATTTAGTTCTAACTGGATTAATGTTTTGGTTCTAACTTCAATTTCAGAGGAGAATATGGCTTTTGGAGCGCATTTTTGGCACTTCTCGTTCGGCTCTTCTTCTTCATCCCCGGTATATTCTGTCTCCAGATTTACCTTGCTGGATCATCTAAAGAATTTCGTTGCTGGCTTTATCATTCACTTCATCATGAAAAGGAACTTAGTTTATAGCTTAGCTCAAAACTTTTTTTTATTCAATTAACTAAAAGCATTCCAATTTGTACAATCCATTGAATGGATAGAAAATTCATAGGAAGCCGAATGCTGGATTATTTTGAATGCAGGTGAACTGGAGATACCATTCATATCATTACTTTTGGTGATTGTAGCCCCATATCAAGTCCAAAACTTAAGGTAAAGATTTAAACTCTTAATGGGATCGCCCTTCATAATTTTTTGAATCTCATCATTTATTATTATCTGTCATTGGCAGGGGAACTCAAGAAGGGAGCATTATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCATCAGTAGCAGTCACTTGTGTCACTGCTGTCTCATTCCTGCTCGTGATCTGA

mRNA sequence

ATGGTTTGTGCATCTCTGTCTTCTGCTATTTCAATTTACACTCCCTCTCTCTGCAAATCCAAGCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCTCTCCTTGAATCCTGCCGCTAAACAGACTTCGATTTGTTATAATCCGCTCAGGTTTGCTGTCGGTAGCGACGGGATTTCGACGGCGGCGATTACCAAGAAGAGGAGACGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTACTGCCCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGAACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTCATCTCGTGGATTAAAGGAGAATATGGCTTTTGGAGCGCATTTTTGGCACTTCTCGTTCGGCTCTTCTTCTTCATCCCCGGTGAACTGGAGATACCATTCATATCATTACTTTTGGTGATTGTAGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGAGCATTATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCATCAGTAGCAGTCACTTGTGTCACTGCTGTCTCATTCCTGCTCGTGATCTGA

Coding sequence (CDS)

ATGGTTTGTGCATCTCTGTCTTCTGCTATTTCAATTTACACTCCCTCTCTCTGCAAATCCAAGCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCTCTCCTTGAATCCTGCCGCTAAACAGACTTCGATTTGTTATAATCCGCTCAGGTTTGCTGTCGGTAGCGACGGGATTTCGACGGCGGCGATTACCAAGAAGAGGAGACGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTACTGCCCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTCGCAAGGGGAACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTCATCTCGTGGATTAAAGGAGAATATGGCTTTTGGAGCGCATTTTTGGCACTTCTCGTTCGGCTCTTCTTCTTCATCCCCGGTGAACTGGAGATACCATTCATATCATTACTTTTGGTGATTGTAGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGAGCATTATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCATCAGTAGCAGTCACTTGTGTCACTGCTGTCTCATTCCTGCTCGTGATCTGA

Protein sequence

MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSDGISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI

Homology

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BLAST of Tan0011500 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.4e-60
Identity = 130/225 (57.78%), Postives = 160/225 (71.11%), Query Frame = 0


Query: 16  SLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS--------ICYNPLRFAVGSDGIST--A 75
           SLC S   + +SL    P   L L P     S        +C+NPLR +      +T  A
Sbjct: 3   SLCLSSSRI-VSLHHQKPFLALKLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSA 62

Query: 76  AITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPAS 135
              K+R+RG S VCYA P L+  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  
Sbjct: 63  RAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMG 122

Query: 136 VISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIIS 195
           ++SW+KGEYG W+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+S
Sbjct: 123 IVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILS 182

Query: 196 LLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           L I+ +LAFQHFSRAG+ ++AFDQNS++A+VA+  VT VSFL +I
Sbjct: 183 LAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

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BLAST of Tan0011500 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 6.2e-59
Identity = 125/231 (54.11%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 2   VCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS-ICYNPLRFAVGSD 61
           +C S S  +S++       K  + L LRS P +    L+   + TS +C+NPLR +    
Sbjct: 4   LCLSSSRIVSLH-----HQKPFLSLKLRSRPSD----LSGLGRHTSPVCFNPLRLSGDRQ 63

Query: 62  GISTAA--ITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFA 121
             +T +  + K+R+RG S VCYA P++A +LQWISTIS + LMLARGTGI KS +VPLFA
Sbjct: 64  RTATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFA 123

Query: 122 LQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           L AP+S+++WIKGEYG W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG Q
Sbjct: 124 LHAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQ 183

Query: 182 EGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           EG+II++ I+ +LAFQHFSRAGS  +A+++ S++A+VA+  VT VS LL++
Sbjct: 184 EGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of Tan0011500 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.4e-12
Identity = 41/127 (32.28%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 89  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLV 148
           L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 149 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGS 208
           RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

[Close]

BLAST of Tan0011500 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 9.8e-12
Identity = 42/133 (31.58%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 89  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLV 148
           LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 149 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGS 208
           RLFF    P  LEIP   +L+V+V+P  +   LR +  G++I L+IA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 209 FRRAFDQNSIVAS 215
           F+ +F Q + +++
Sbjct: 170 FKNSFTQKNGISN 182

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BLAST of Tan0011500 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = 0


Query: 89  LQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLV 148
           L+W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V
Sbjct: 48  LEWVASIAAIYLLVLDRTNWKTNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVV 107

Query: 149 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGS 208
           +LFF       LE+P   +LL +VAP  +    R +  G  I L I  YL  +H   +G 
Sbjct: 108 QLFFPKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRASGG 167

Query: 209 FRRAFDQ-NSIVASVAVTCV 221
           FR AF + N I  +V + C+
Sbjct: 168 FRNAFTKANGISNTVGIICL 187

[Close]

BLAST of Tan0011500 vs. NCBI nr
Match: XP_038896035.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 381.7 bits (979), Expect = 4.4e-102
Identity = 202/229 (88.21%), Postives = 217/229 (94.76%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC SLSSA+S+Y PSL +SKLSVPLSLRSSPPNAKLS +PAAKQ+SICYNPLRFAVGS+
Sbjct: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
           GI+TAAITKKR RGLSA+CYAMP+ AR LQWISTISS VLMLA+GTGIQKSFIVPLFAL 
Sbjct: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSAVLMLAKGTGIQKSFIVPLFALL 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASV+SWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRGTQEG
Sbjct: 121 APASVVSWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQSLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           +IISL+IAAYLAFQHFSRAGSFRRAFDQNSIVA+VAV C TAVSFLLVI
Sbjct: 181 NIISLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 229

[Close]

BLAST of Tan0011500 vs. NCBI nr
Match: XP_008443932.1 (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo] >KAA0057095.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa] >TYK20630.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 379.0 bits (972), Expect = 2.8e-101
Identity = 201/229 (87.77%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
           GI+TA I KK+ RGLSA CYAMP+  R LQW+STISSVVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVA+VAV C+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of Tan0011500 vs. NCBI nr
Match: XP_023542165.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 2.7e-99
Identity = 202/229 (88.21%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           +VC  LSSAIS+++P LCKSKLS PLSLRSS PNAKL+ NPAAKQ SIC NP+RF  GSD
Sbjct: 9   IVCV-LSSAISLHSPFLCKSKLSAPLSLRSSLPNAKLTFNPAAKQRSICSNPIRFGFGSD 68

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
             ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+LMLARGTGIQKSFIVPLFALQ
Sbjct: 69  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 128

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 129 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 188

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           +IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Sbjct: 189 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 236

[Close]

BLAST of Tan0011500 vs. NCBI nr
Match: AXF54227.1 (COR1 [Cucurbita pepo])

HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99
Identity = 202/229 (88.21%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC  LSSAIS+++P LCKSKLS PLSLRSS PNAKL+ NPAAKQ+SIC NP+RF  GSD
Sbjct: 1   MVCV-LSSAISLHSPFLCKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
             ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+LMLARGTGIQKSFIVPLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           +IISLLIAAYLAFQHFS AGSFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Sbjct: 181 TIISLLIAAYLAFQHFSLAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Tan0011500 vs. NCBI nr
Match: XP_004147401.1 (cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KGN65572.1 hypothetical protein Csa_019760 [Cucumis sativus])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 200/229 (87.34%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
           GI+     KK+ RGLSAVCYAMP+  R LQWISTISSVVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIN-----KKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVA+VAV C+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

[Close]

BLAST of Tan0011500 vs. ExPASy TrEMBL
Match: A0A5D3DB21 (Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00120 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 201/229 (87.77%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
           GI+TA I KK+ RGLSA CYAMP+  R LQW+STISSVVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVA+VAV C+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of Tan0011500 vs. ExPASy TrEMBL
Match: A0A1S3B961 (cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487404 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101
Identity = 201/229 (87.77%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
           GI+TA I KK+ RGLSA CYAMP+  R LQW+STISSVVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVA+VAV C+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

[Close]

BLAST of Tan0011500 vs. ExPASy TrEMBL
Match: A0A345BTH0 (COR1 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 202/229 (88.21%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC  LSSAIS+++P LCKSKLS PLSLRSS PNAKL+ NPAAKQ+SIC NP+RF  GSD
Sbjct: 1   MVCV-LSSAISLHSPFLCKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
             ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+LMLARGTGIQKSFIVPLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           +IISLLIAAYLAFQHFS AGSFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Sbjct: 181 TIISLLIAAYLAFQHFSLAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Tan0011500 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.4e-99
Identity = 202/229 (88.21%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC  LSSAIS+++P L KSKLS PLSLRSS PNAKL+ NPAAKQ+SIC NP+RF  GSD
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
             ST AI KKRRRGLSAVCYAMPL+ARNLQWISTISSV+LMLARGTGIQKSFIVPLFALQ
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           +IISLLIAAYLAFQHFSRAGSFRRAFDQNSIVA+VA+ CVTAVSFLLVI
Sbjct: 181 TIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

[Close]

BLAST of Tan0011500 vs. ExPASy TrEMBL
Match: A0A0A0LXM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 6.4e-99
Identity = 200/229 (87.34%), Postives = 211/229 (92.14%), Query Frame = 0


Query: 1   MVCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTSICYNPLRFAVGSD 60
           MVC SLSSA+S+Y PS  KSKLSVPLSLRSSPPNAKLSLN AAKQ+SICYNPLRFAVGS+
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GISTAAITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQ 120
           GI+     KK+ RGLSAVCYAMP+  R LQWISTISSVVLMLA+GTGIQKSFIVPLFALQ
Sbjct: 61  GIN-----KKKSRGLSAVCYAMPVNTRTLQWISTISSVVLMLAKGTGIQKSFIVPLFALQ 120

Query: 121 APASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180
           APASVISWIKGEYG WSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG
Sbjct: 121 APASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEG 180

Query: 181 SIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
            IISLLIAAYLAFQHFSRAGSF+RAFDQNSIVA+VAV C+TAVSFL VI
Sbjct: 181 CIISLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

[Close]

BLAST of Tan0011500 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 231.9 bits (590), Expect = 5.2e-61
Identity = 130/225 (57.78%), Postives = 160/225 (71.11%), Query Frame = 0


Query: 16  SLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS--------ICYNPLRFAVGSDGIST--A 75
           SLC S   + +SL    P   L L P     S        +C+NPLR +      +T  A
Sbjct: 3   SLCLSSSRI-VSLHHQKPFLALKLRPRPSNISGLGHSTSVVCFNPLRLSADRQRTATVSA 62

Query: 76  AITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPAS 135
              K+R+RG S VCYA P L+  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  
Sbjct: 63  RAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAPMG 122

Query: 136 VISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSIIS 195
           ++SW+KGEYG W+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I+S
Sbjct: 123 IVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAILS 182

Query: 196 LLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           L I+ +LAFQHFSRAG+ ++AFDQNS++A+VA+  VT VSFL +I
Sbjct: 183 LAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

[Close]

BLAST of Tan0011500 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 )

HSP 1 Score: 228.8 bits (582), Expect = 4.4e-60
Identity = 125/231 (54.11%), Postives = 170/231 (73.59%), Query Frame = 0


Query: 2   VCASLSSAISIYTPSLCKSKLSVPLSLRSSPPNAKLSLNPAAKQTS-ICYNPLRFAVGSD 61
           +C S S  +S++       K  + L LRS P +    L+   + TS +C+NPLR +    
Sbjct: 4   LCLSSSRIVSLH-----HQKPFLSLKLRSRPSD----LSGLGRHTSPVCFNPLRLSGDRQ 63

Query: 62  GISTAA--ITKKRRRGLSAVCYAMPLTARNLQWISTISSVVLMLARGTGIQKSFIVPLFA 121
             +T +  + K+R+RG S VCYA P++A +LQWISTIS + LMLARGTGI KS +VPLFA
Sbjct: 64  RTATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCLALMLARGTGIHKSVVVPLFA 123

Query: 122 LQAPASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQ 181
           L AP+S+++WIKGEYG W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG Q
Sbjct: 124 LHAPSSIVAWIKGEYGVWAAFLALIARLFFTFPGELELPFIALLLVIVAPYQVMNIRGKQ 183

Query: 182 EGSIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           EG+II++ I+ +LAFQHFSRAGS  +A+++ S++A+VA+  VT VS LL++
Sbjct: 184 EGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

[Close]

BLAST of Tan0011500 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 220.7 bits (561), Expect = 1.2e-57
Identity = 113/167 (67.66%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 64  TAAITKKRRRGLSAVCYAMP-LTARNLQWISTISSVVLMLARGTGIQKSFIVPLFALQAP 123
           +A   K+R+RG S VCYA P L+  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP
Sbjct: 17  SARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCVALMFARGTGIHKSFVVPLFALQAP 76

Query: 124 ASVISWIKGEYGFWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGSI 183
             ++SW+KGEYG W+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG+I
Sbjct: 77  MGIVSWMKGEYGIWAAFLALLTRLFFSFPVELELPFIALLLVIVAPYQVMSIRGKQEGAI 136

Query: 184 ISLLIAAYLAFQHFSRAGSFRRAFDQNSIVASVAVTCVTAVSFLLVI 230
           +SL I+ +LAFQHFSRAG+ ++AFDQNS++A+VA+  VT VSFL +I
Sbjct: 137 LSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183

[Close]

BLAST of Tan0011500 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-13
Identity = 41/127 (32.28%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 89  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLV 148
           L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++
Sbjct: 51  LKFLASFAAIYLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVL 110

Query: 149 RLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGS 208
           RLFF    P  LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   +G 
Sbjct: 111 RLFFPKHFPDWLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGG 170

[Close]

BLAST of Tan0011500 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 72.0 bits (175), Expect = 6.9e-13
Identity = 42/133 (31.58%), Postives = 76/133 (57.14%), Query Frame = 0


Query: 89  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGFWSAFLALLV 148
           LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++V
Sbjct: 50  LQWAASIFAIYLLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIV 109

Query: 149 RLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSRAGS 208
           RLFF    P  LEIP   +L+V+V+P  +   LR +  G++I L+IA YL  +H   +G 
Sbjct: 110 RLFFPKEFPEWLEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGG 169

Query: 209 FRRAFDQNSIVAS 215
           F+ +F Q + +++
Sbjct: 170 FKNSFTQKNGISN 182

The following BLAST results are available for this feature:

BLAST of Tan0011500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4I1G5	7.4e-60	57.78	Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia...	[more]
Q94AL8	6.2e-59	54.11	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]
Q9SVL6	4.4e-12	32.28	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23164	9.8e-12	31.58	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	2.7e-09	31.43	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of Tan0011500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896035.1	4.4e-102	88.21	cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispi...	[more]
XP_008443932.1	2.8e-101	87.77	PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucu...	[more]
XP_023542165.1	2.7e-99	88.21	cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurb...	[more]
AXF54227.1	3.5e-99	88.21	COR1 [Cucurbita pepo]	[more]
XP_004147401.1	1.3e-98	87.34	cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KG...	[more]

BLAST of Tan0011500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB21	1.4e-101	87.77	Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B961	1.4e-101	87.77	cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo ...	[more]
A0A345BTH0	1.7e-99	88.21	COR1 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1K0I6	6.4e-99	88.21	cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu...	[more]
A0A0A0LXM7	6.4e-99	87.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1	[more]

BLAST of Tan0011500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29390.1	5.2e-61	57.78	cold regulated 314 thylakoid membrane 2	[more]
AT1G29395.1	4.4e-60	54.11	COLD REGULATED 314 INNER MEMBRANE 1	[more]
AT1G29390.2	1.2e-57	67.66	cold regulated 314 thylakoid membrane 2	[more]
AT3G50830.1	3.1e-13	32.28	cold-regulated 413-plasma membrane 2	[more]
AT4G37220.1	6.9e-13	31.58	Cold acclimation protein WCOR413 family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 66..219 e-value: 4.8E-52 score: 176.6
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 15..229
None	No IPR available	PANTHER	PTHR33596:SF17	COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 15..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011500.1	Tan0011500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane