Tan0011416 (gene) Snake gourd v1

Overview


Name	Tan0011416
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box domain-containing protein
Location	LG06: 28591650 .. 28593076 (-)
RNA-Seq Expression	Tan0011416
Synteny	Tan0011416

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGAATCCATTTTGTAAAGGAAAATGAAAAATGAATAAAGAAAATGGAGGAAACTGCTCCATGCCAGTTCATCTTCTTCTTCACACCCTCTCCTCCGTTTTCAGCAGCTCGGTTTCGCCGCCGCTTCTCTTCCGTACGCTGCTGCAACCGCCACCATCGTCTTTCTTCCGTTCGTGCTGCCGAAGCCTCGTTCCTAGCAGTTTTGCACTGATTTTCTACTCTCTTGCTTTGCTGTGTTACAGGTATTCTCCCAATCTCCATCTATGTCTTTCTTCTCACTTGAAAAACACGAATTAGAACTTGTCTTATGAAACAATGGAGTAGTTGTTTGGTTTCTTCTTTTAATAACAATAGCCGAATAGCAACGAGCAAAAAAAAAAAAAAAAAAAAAACTCGGCTACTTCACTCCAATGCTCTTGCTAATCTAATCTCTACATTTTCCGTTGCTCTTTTACTCCTTATTTCTTATTTTGAAAAGTTATTCCTAAGAAAAAAACACAAAAGTTATTAGTGAAAGTCAGTGAAGCAGTGGTTATCTTTATTCACGTTGTTTCTCTGCAATTCCTCCATTATTGACGAAAGAGAAAGGGAAGCAAGAAATGGAAGATATAGATAGGTTCAGCCAGCTACCGGAGGAGTGCATCTCTCGCATCATCGCCTTAACGCCGGTGAAGGATACTTGTGGAGTTGCCGCAGTCTCGCGGATCTTCAGATCAATGGCTAATTCCGACCCTGCTTGGGAGGCACGGCTGCCCTCGAACATTAAAAAGATCATTTTGCAGTCCTCGCCACCGTCATTATCACAGTTTCTAAATTCCTTGTCTTTGAAGGATCTCTACCTTCATCTCTCTCATCATCCACTTCTCATCGGCACTGGAAACACAGTAATCTCTAATGCCCTGTTCTCTCTGTTAAAGTATTAATTAAATTAACTGTAACCTATCAATTTAAGCTTTTGAGTTCAGCCACTCAATTTGTGAGTACATAATCAGCATGAAAGAAATTCTTGCAGAGGAAAGAAAAGTTTAATATTACATTTTTTTTGAAACTGAAATTGATCTAAGTGAGGAGATCATTACATTTACCCCTATTATTATATTGTGTGTCAAGAGGAAATTTAGGATACCATAAATAAAGGAAAGAAAAATTAGGGCAAAACTTGTTGACATTTCATTGGATTGACACTATAATTTCAGAGCTTTGCTTTGGAAAAAGAGAGTGGGAAGGTATGTTATATGATAGGAGCAAAAGACTTGAAGATTGTGTGGTATGATGCTACCTCAGAATGTTGCTATTGGGAATCTGCCCCTGAATCTAGGTACTCACTTCATAATCCCTTTTTTCCTTTTTTGAAAAGGACTTCAATATCCTCTCTTTTTGGTTGCATTGCATTTCTATTTCTTCTCCCCATCCATGTTTCAATTAA

mRNA sequence

ACTGAATCCATTTTGTAAAGGAAAATGAAAAATGAATAAAGAAAATGGAGGAAACTGCTCCATGCCAGTTCATCTTCTTCTTCACACCCTCTCCTCCGTTTTCAGCAGCTCGGTTTCGCCGCCGCTTCTCTTCCGTACGCTGCTGCAACCGCCACCATCGTCTTTCTTCCGTTCGTGCTGCCGAAGCCTCGTTCCTAGCAGTTTTGCACTGATTTTCTACTCTCTTGCTTTGCTGTGTTACAGAGAAAGGGAAGCAAGAAATGGAAGATATAGATAGGTTCAGCCAGCTACCGGAGGAGTGCATCTCTCGCATCATCGCCTTAACGCCGGTGAAGGATACTTGTGGAGTTGCCGCAGTCTCGCGGATCTTCAGATCAATGGCTAATTCCGACCCTGCTTGGGAGGCACGGCTGCCCTCGAACATTAAAAAGATCATTTTGCAGTCCTCGCCACCGTCATTATCACAGTTTCTAAATTCCTTGTCTTTGAAGGATCTCTACCTTCATCTCTCTCATCATCCACTTCTCATCGGCACTGGAAACACAAGCTTTGCTTTGGAAAAAGAGAGTGGGAAGGTATGTTATATGATAGGAGCAAAAGACTTGAAGATTGTGTGGTATGATGCTACCTCAGAATGTTGCTATTGGGAATCTGACTTCAATATCCTCTCTTTTTGGTTGCATTGCATTTCTATTTCTTCTCCCCATCCATGTTTCAATTAA

Coding sequence (CDS)

ATGGAAGATATAGATAGGTTCAGCCAGCTACCGGAGGAGTGCATCTCTCGCATCATCGCCTTAACGCCGGTGAAGGATACTTGTGGAGTTGCCGCAGTCTCGCGGATCTTCAGATCAATGGCTAATTCCGACCCTGCTTGGGAGGCACGGCTGCCCTCGAACATTAAAAAGATCATTTTGCAGTCCTCGCCACCGTCATTATCACAGTTTCTAAATTCCTTGTCTTTGAAGGATCTCTACCTTCATCTCTCTCATCATCCACTTCTCATCGGCACTGGAAACACAAGCTTTGCTTTGGAAAAAGAGAGTGGGAAGGTATGTTATATGATAGGAGCAAAAGACTTGAAGATTGTGTGGTATGATGCTACCTCAGAATGTTGCTATTGGGAATCTGACTTCAATATCCTCTCTTTTTGGTTGCATTGCATTTCTATTTCTTCTCCCCATCCATGTTTCAATTAA

Protein sequence

MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSECCYWESDFNILSFWLHCISISSPHPCFN

Homology

[Close]

BLAST of Tan0011416 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 6   RFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPP 65
           RF  LPE+CIS++I+ T  +D C VA+VS+  +S A SD  WE  LPS    ++LQS+  
Sbjct: 31  RFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA-- 90

Query: 66  SLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSE 125
                 N LS K+++L L+ + +L+  G  SF +EK SGK CYM+ A +L I+W D+ + 
Sbjct: 91  ------NHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPA- 144

Query: 126 CCYWE 131
             YW+
Sbjct: 151 --YWK 144

[Close]

BLAST of Tan0011416 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 7   FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPS 66
           F  LPEECI+ +I+ T   D C ++AVS++ RS A+S+  WE  LPS+ +  I      S
Sbjct: 3   FLDLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYI----DNS 62

Query: 67  LSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDA 123
           LS+F N    K L+L     PLLI  G TSF +EK SGK C+M+ A+ L IVW D+
Sbjct: 63  LSRFSN----KQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDS 110

[Close]

BLAST of Tan0011416 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-17
Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 7   FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPS 66
           F  LPE+CIS II+ T  +D C  A+VS+ F S  +SD  W+  LP   + ++ +S    
Sbjct: 61  FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV-- 120

Query: 67  LSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSEC 126
                   S K+LY  L H+P+LI  G  SF LEK SGK C M+ +K+L I W  +    
Sbjct: 121 ------FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPE-- 173

Query: 127 CYWE 131
            YW+
Sbjct: 181 -YWQ 173

[Close]

BLAST of Tan0011416 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-17
Identity = 50/123 (40.65%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 7   FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPS 66
           F  LPE+CIS II+ T  +D C  A+VS+ F S  NSD  W+  LPS+   ++    PPS
Sbjct: 47  FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLV----PPS 106

Query: 67  LSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSEC 126
                   S K+LY  +  +P+L+  G  SF LEKE+GK C+M+  K  K +W    S  
Sbjct: 107 RV----FSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPK--KSMWITWVSTP 159

Query: 127 CYW 130
            YW
Sbjct: 167 QYW 159

[Close]

BLAST of Tan0011416 vs. ExPASy Swiss-Prot
Match: Q949S5 (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.8e-15
Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 8   SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSL 67
           + LPE+CI++I++LT   D C ++AVS IFRS A SD  W   LP++         P   
Sbjct: 2   NNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADF--------PAGF 61

Query: 68  SQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVW 120
           +      + K L+  L  +PLLI     SF+LE++SG  CYM+ A+ L IVW
Sbjct: 62  AAPAGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVW 105

[Close]

BLAST of Tan0011416 vs. NCBI nr
Match: XP_023005068.1 (F-box protein PP2-B11-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 189.5 bits (480), Expect = 2.1e-44
Identity = 98/132 (74.24%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I 
Sbjct: 1   MEDMDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIATSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWY 120
           QSS PSL +FLNSLS KDLY HLS HPLLIGTGNTSF LEKESGKV YM GAKDLKIVW 
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFHLSDHPLLIGTGNTSFGLEKESGKVRYMRGAKDLKIVWS 120

Query: 121 DATSECCYWESD 133
           D T +   WE D
Sbjct: 121 D-TPQYWRWEHD 131

[Close]

BLAST of Tan0011416 vs. NCBI nr
Match: KAG6592887.1 (F-box protein PP2-B11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-44
Identity = 97/132 (73.48%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK ++ 
Sbjct: 1   MDDIDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIASSDAVWEARLPSDIKDVLS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWY 120
           QSS PSL +FLNSLS KDLY HLS HPLLIGTGNTSF LEKESGKV YM GAKDLKIVW 
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFHLSDHPLLIGTGNTSFGLEKESGKVRYMRGAKDLKIVWS 120

Query: 121 DATSECCYWESD 133
           D T +   WE D
Sbjct: 121 D-TPQYWRWEHD 131

[Close]

BLAST of Tan0011416 vs. NCBI nr
Match: XP_022960303.1 (F-box protein PP2-B11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 97/132 (73.48%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I 
Sbjct: 1   MDDIDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIASSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWY 120
           QSS PSL +FLNSLS KDLY  LS HPLLIGTGNTSF LEKESGKV YM GAKDLKIVW 
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFRLSDHPLLIGTGNTSFGLEKESGKVRYMRGAKDLKIVWS 120

Query: 121 DATSECCYWESD 133
           D T +   WE D
Sbjct: 121 D-TPQYWQWEHD 131

[Close]

BLAST of Tan0011416 vs. NCBI nr
Match: XP_023513884.1 (F-box protein PP2-B11-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.9 bits (468), Expect = 5.3e-43
Identity = 96/132 (72.73%), Postives = 105/132 (79.55%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           M+DID  +QLPEECISRI+AL PVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I 
Sbjct: 1   MDDIDWLTQLPEECISRILALAPVKDGCRAAAVSRTFRSIASSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWY 120
           QSS PSL +FLNSLS KDLY  LS HPLLIGTGNTSF LEKESGKV YM GAKDLKIVW 
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFRLSDHPLLIGTGNTSFGLEKESGKVRYMRGAKDLKIVWS 120

Query: 121 DATSECCYWESD 133
           D T +   WE D
Sbjct: 121 D-TPQYWRWEHD 131

[Close]

BLAST of Tan0011416 vs. NCBI nr
Match: XP_023005066.1 (F-box protein PP2-B11-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 184.5 bits (467), Expect = 6.9e-43
Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I 
Sbjct: 1   MEDMDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIATSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFALEKESGKVCYMIGAKDLKIV 120
           QSS PSL +FLNSLS KDLY HLS HPLLIGTGNT  SF LEKESGKV YM GAKDLKIV
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFHLSDHPLLIGTGNTFQSFGLEKESGKVRYMRGAKDLKIV 120

Query: 121 WYDATSECCYWESD 133
           W D T +   WE D
Sbjct: 121 WSD-TPQYWRWEHD 133

[Close]

BLAST of Tan0011416 vs. ExPASy TrEMBL
Match: A0A6J1L176 (F-box protein PP2-B11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498168 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44
Identity = 98/132 (74.24%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I 
Sbjct: 1   MEDMDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIATSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWY 120
           QSS PSL +FLNSLS KDLY HLS HPLLIGTGNTSF LEKESGKV YM GAKDLKIVW 
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFHLSDHPLLIGTGNTSFGLEKESGKVRYMRGAKDLKIVWS 120

Query: 121 DATSECCYWESD 133
           D T +   WE D
Sbjct: 121 D-TPQYWRWEHD 131

[Close]

BLAST of Tan0011416 vs. ExPASy TrEMBL
Match: A0A6J1H8G3 (F-box protein PP2-B11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461076 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 5.1e-44
Identity = 97/132 (73.48%), Postives = 106/132 (80.30%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I 
Sbjct: 1   MDDIDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIASSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWY 120
           QSS PSL +FLNSLS KDLY  LS HPLLIGTGNTSF LEKESGKV YM GAKDLKIVW 
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFRLSDHPLLIGTGNTSFGLEKESGKVRYMRGAKDLKIVWS 120

Query: 121 DATSECCYWESD 133
           D T +   WE D
Sbjct: 121 D-TPQYWQWEHD 131

[Close]

BLAST of Tan0011416 vs. ExPASy TrEMBL
Match: A0A6J1KTW8 (F-box protein PP2-B11-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498168 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.3e-43
Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           MED+D  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A SD  WEARLPS+IK +I 
Sbjct: 1   MEDMDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIATSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFALEKESGKVCYMIGAKDLKIV 120
           QSS PSL +FLNSLS KDLY HLS HPLLIGTGNT  SF LEKESGKV YM GAKDLKIV
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFHLSDHPLLIGTGNTFQSFGLEKESGKVRYMRGAKDLKIV 120

Query: 121 WYDATSECCYWESD 133
           W D T +   WE D
Sbjct: 121 WSD-TPQYWRWEHD 133

[Close]

BLAST of Tan0011416 vs. ExPASy TrEMBL
Match: A0A6J1H715 (F-box protein PP2-B11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461076 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 97/134 (72.39%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MEDIDRFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIIL 60
           M+DID  +QLPEECISRI+ALTPVKD C  AAVSR FRS+A+SD  WEARLPS+IK +I 
Sbjct: 1   MDDIDWLTQLPEECISRILALTPVKDGCRAAAVSRTFRSIASSDAVWEARLPSDIKDVIS 60

Query: 61  QSSPPSLSQFLNSLSLKDLYLHLSHHPLLIGTGNT--SFALEKESGKVCYMIGAKDLKIV 120
           QSS PSL +FLNSLS KDLY  LS HPLLIGTGNT  SF LEKESGKV YM GAKDLKIV
Sbjct: 61  QSSSPSLPEFLNSLSRKDLYFRLSDHPLLIGTGNTFQSFGLEKESGKVRYMRGAKDLKIV 120

Query: 121 WYDATSECCYWESD 133
           W D T +   WE D
Sbjct: 121 WSD-TPQYWQWEHD 133

[Close]

BLAST of Tan0011416 vs. ExPASy TrEMBL
Match: A0A6J1IZ41 (putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.4e-30
Identity = 72/130 (55.38%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 8   SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSL 67
           +QLP ECIS I+A T  KD C  AAVS  FRS A+S+  W   LPS+ ++II Q+S PS 
Sbjct: 4   NQLPVECISSILAFTSPKDACRSAAVSLAFRSAADSEALWTTFLPSDYRQIISQASSPST 63

Query: 68  SQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSECC 127
           + FLNSLS K LY HL   PLLIG+GN+SFALEK+SGK CY+IGA+DL I+W +++    
Sbjct: 64  TSFLNSLSKKALYFHLCDRPLLIGSGNSSFALEKDSGKKCYLIGARDLGIIWGNSSQ--- 123

Query: 128 YWESDFNILS 138
           YW  + N +S
Sbjct: 124 YWTWNSNPIS 130

[Close]

BLAST of Tan0011416 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0


Query: 6   RFSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPP 65
           RF  LPE+CIS++I+ T  +D C VA+VS+  +S A SD  WE  LPS    ++LQS+  
Sbjct: 31  RFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSA-- 90

Query: 66  SLSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSE 125
                 N LS K+++L L+ + +L+  G  SF +EK SGK CYM+ A +L I+W D+ + 
Sbjct: 91  ------NHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPA- 144

Query: 126 CCYWE 131
             YW+
Sbjct: 151 --YWK 144

[Close]

BLAST of Tan0011416 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 53/116 (45.69%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 7   FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPS 66
           F  LPEECI+ +I+ T   D C ++AVS++ RS A+S+  WE  LPS+ +  I      S
Sbjct: 3   FLDLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYI----DNS 62

Query: 67  LSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDA 123
           LS+F N    K L+L     PLLI  G TSF +EK SGK C+M+ A+ L IVW D+
Sbjct: 63  LSRFSN----KQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDS 110

[Close]

BLAST of Tan0011416 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 50/123 (40.65%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 7   FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPS 66
           F  LPE+CIS II+ T  +D C  A+VS+ F S  NSD  W+  LPS+   ++    PPS
Sbjct: 47  FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLV----PPS 106

Query: 67  LSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSEC 126
                   S K+LY  +  +P+L+  G  SF LEKE+GK C+M+  K  K +W    S  
Sbjct: 107 RV----FSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPK--KSMWITWVSTP 159

Query: 127 CYW 130
            YW
Sbjct: 167 QYW 159

[Close]

BLAST of Tan0011416 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 0


Query: 7   FSQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPS 66
           F  LPE+CIS II+ T  +D C  A+VS+ F S  +SD  W+  LP   + ++ +S    
Sbjct: 61  FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRV-- 120

Query: 67  LSQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVWYDATSEC 126
                   S K+LY  L H+P+LI  G  SF LEK SGK C M+ +K+L I W  +    
Sbjct: 121 ------FASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPE-- 173

Query: 127 CYWE 131
            YW+
Sbjct: 181 -YWQ 173

[Close]

BLAST of Tan0011416 vs. TAIR 10
Match: AT1G80110.1 (phloem protein 2-B11 )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 8   SQLPEECISRIIALTPVKDTCGVAAVSRIFRSMANSDPAWEARLPSNIKKIILQSSPPSL 67
           + LPE+CI++I++LT   D C ++AVS IFRS A SD  W   LP++         P   
Sbjct: 2   NNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADF--------PAGF 61

Query: 68  SQFLNSLSLKDLYLHLSHHPLLIGTGNTSFALEKESGKVCYMIGAKDLKIVW 120
           +      + K L+  L  +PLLI     SF+LE++SG  CYM+ A+ L IVW
Sbjct: 62  AAPAGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVW 105

The following BLAST results are available for this feature:

BLAST of Tan0011416 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NPT8	2.6e-21	42.40	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9FLU7	2.5e-19	45.69	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]
Q3E6P4	3.9e-17	39.52	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVR5	3.9e-17	40.65	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]
Q949S5	4.8e-15	40.18	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]

BLAST of Tan0011416 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005068.1	2.1e-44	74.24	F-box protein PP2-B11-like isoform X2 [Cucurbita maxima]	[more]
KAG6592887.1	2.8e-44	73.48	F-box protein PP2-B11, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960303.1	1.1e-43	73.48	F-box protein PP2-B11-like isoform X2 [Cucurbita moschata]	[more]
XP_023513884.1	5.3e-43	72.73	F-box protein PP2-B11-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023005066.1	6.9e-43	73.13	F-box protein PP2-B11-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Tan0011416 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L176	1.0e-44	74.24	F-box protein PP2-B11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11149816...	[more]
A0A6J1H8G3	5.1e-44	73.48	F-box protein PP2-B11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A6J1KTW8	3.3e-43	73.13	F-box protein PP2-B11-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11149816...	[more]
A0A6J1H715	1.7e-42	72.39	F-box protein PP2-B11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461...	[more]
A0A6J1IZ41	9.4e-30	55.38	putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 ...	[more]

BLAST of Tan0011416 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02230.1	1.9e-22	42.40	phloem protein 2-B1	[more]
AT5G24560.1	1.8e-20	45.69	phloem protein 2-B12	[more]
AT2G02250.1	2.8e-18	40.65	phloem protein 2-B2	[more]
AT2G02240.1	2.8e-18	39.52	F-box family protein	[more]
AT1G80110.1	3.4e-16	40.18	phloem protein 2-B11	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 6..47 e-value: 7.3E-5 score: 22.5
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 4..50 score: 9.470975
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..87 e-value: 2.5E-7 score: 32.5
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 4..130
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 4..130
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011416.1	Tan0011416.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding