Tan0011319 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTGCAACAGGGGGTGGAGAGTCGATAATGGCACATTTCGACACTGGTACTTAGTACAAGTACAAAAATTGTTCAAGCAGAAACTCCCTGAAAGCGACATACAAGTGACCCCAAACCTAGAATCTAGAGTGAAGATTCTGAAGAAGCAATACAATGCTATAGCTGAGATGATGGGGCCAGCATGTAGTGGGTTTGGGTGGAATGACGAACGTAAGTGCATTCAGGTAGAGAAAGCAATTTTCGATGACTGGGTTAAGGTAAACCTCAATTTTTTTTTCATGAATTCACTTATTGACAACGTGTAGCAACCAAACTATATGACTAATATTTTGTTTACTTTGTTCCATGCAGGCACACCCTCATGCTCGAGGCCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGACAGGGCAACTGGTGCGGGTGCAGAGACTCCCCATGACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACCTGCATATGACCCGACATCTGACGAGGATATGTCTGCCACACCTATATCCAGGAACGATGGGGCAGGATCATCAAGTGGGTCGAAGAGATGCAAAGTGAAACAAGGGGACATTATTGACGTATTTCGTACAGAGATGCGTTGGGCGTCAACACAACTAGAGAGAATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTATATGCAGAACTTCAAGCTATCTCTGGTATAGATATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCCTCGACTACCCAGCTGAATGGAAATACAAATGTTGCATGCGTATCTTGGGAAGGGAGGCATGA ATGTCGTGCAACAGGGGGTGGAGAGTCGATAATGGCACATTTCGACACTGGTACTTAGTACAAGTACAAAAATTGTTCAAGCAGAAACTCCCTGAAAGCGACATACAAGTGACCCCAAACCTAGAATCTAGAGTGAAGATTCTGAAGAAGCAATACAATGCTATAGCTGAGATGATGGGGCCAGCATGTAGTGGGTTTGGGTGGAATGACGAACGTAAGTGCATTCAGGTAGAGAAAGCAATTTTCGATGACTGGGTTAAGGCACACCCTCATGCTCGAGGCCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGACAGGGCAACTGGTGCGGGTGCAGAGACTCCCCATGACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACCTGCATATGACCCGACATCTGACGAGGATATGTCTGCCACACCTATATCCAGGAACGATGGGGCAGGATCATCAAGTGGAATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTATATGCAGAACTTCAAGCTATCTCTGGTATAGATATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCCTCGACTACCCAGCTGAATGGAAATACAAATGTTGCATGCGTATCTTGGGAAGGGAGGCATGA ATGTCGTGCAACAGGGGGTGGAGAGTCGATAATGGCACATTTCGACACTGGTACTTAGTACAAGTACAAAAATTGTTCAAGCAGAAACTCCCTGAAAGCGACATACAAGTGACCCCAAACCTAGAATCTAGAGTGAAGATTCTGAAGAAGCAATACAATGCTATAGCTGAGATGATGGGGCCAGCATGTAGTGGGTTTGGGTGGAATGACGAACGTAAGTGCATTCAGGTAGAGAAAGCAATTTTCGATGACTGGGTTAAGGCACACCCTCATGCTCGAGGCCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGACAGGGCAACTGGTGCGGGTGCAGAGACTCCCCATGACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACCTGCATATGACCCGACATCTGACGAGGATATGTCTGCCACACCTATATCCAGGAACGATGGGGCAGGATCATCAAGTGGAATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTATATGCAGAACTTCAAGCTATCTCTGGTATAGATATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCCTCGACTACCCAGCTGAATGGAAATACAAATGTTGCATGCGTATCTTGGGAAGGGAGGCATGA MSCNRGWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSGFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHDMASASATDVDDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSSSGIALWPKEKDELESTRRKRLYAELQAISGIDMDDCLQIAETLLADISKFHSFLDYPAEWKYKCCMRILGREA Homology
BLAST of Tan0011319 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58 Identity = 131/271 (48.34%), Postives = 162/271 (59.78%), Query Frame = 0
BLAST of Tan0011319 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 233.8 bits (595), Expect = 1.6e-57 Identity = 120/229 (52.40%), Postives = 152/229 (66.38%), Query Frame = 0
BLAST of Tan0011319 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]) HSP 1 Score: 232.6 bits (592), Expect = 3.6e-57 Identity = 119/229 (51.97%), Postives = 151/229 (65.94%), Query Frame = 0
BLAST of Tan0011319 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 228.0 bits (580), Expect = 8.8e-56 Identity = 121/256 (47.27%), Postives = 153/256 (59.77%), Query Frame = 0
BLAST of Tan0011319 vs. NCBI nr
Match: XP_031741735.1 (uncharacterized protein At2g29880-like [Cucumis sativus]) HSP 1 Score: 217.2 bits (552), Expect = 1.6e-52 Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 0
BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59 Identity = 131/271 (48.34%), Postives = 162/271 (59.78%), Query Frame = 0
BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 7.8e-58 Identity = 120/229 (52.40%), Postives = 152/229 (66.38%), Query Frame = 0
BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1) HSP 1 Score: 232.6 bits (592), Expect = 1.7e-57 Identity = 119/229 (51.97%), Postives = 151/229 (65.94%), Query Frame = 0
BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 4.3e-56 Identity = 121/256 (47.27%), Postives = 153/256 (59.77%), Query Frame = 0
BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52 Identity = 104/171 (60.82%), Postives = 130/171 (76.02%), Query Frame = 0
BLAST of Tan0011319 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 9.8e-13 Identity = 65/246 (26.42%), Postives = 119/246 (48.37%), Query Frame = 0
BLAST of Tan0011319 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 71.6 bits (174), Expect = 9.8e-13 Identity = 65/246 (26.42%), Postives = 119/246 (48.37%), Query Frame = 0
BLAST of Tan0011319 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 5.4e-11 Identity = 57/213 (26.76%), Postives = 94/213 (44.13%), Query Frame = 0
BLAST of Tan0011319 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06 Identity = 28/99 (28.28%), Postives = 42/99 (42.42%), Query Frame = 0
BLAST of Tan0011319 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06 Identity = 28/99 (28.28%), Postives = 42/99 (42.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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