Tan0011319 (gene) Snake gourd v1

Overview
NameTan0011319
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotransposon protein
LocationLG01: 53482081 .. 53483005 (-)
RNA-Seq ExpressionTan0011319
SyntenyTan0011319
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTGCAACAGGGGGTGGAGAGTCGATAATGGCACATTTCGACACTGGTACTTAGTACAAGTACAAAAATTGTTCAAGCAGAAACTCCCTGAAAGCGACATACAAGTGACCCCAAACCTAGAATCTAGAGTGAAGATTCTGAAGAAGCAATACAATGCTATAGCTGAGATGATGGGGCCAGCATGTAGTGGGTTTGGGTGGAATGACGAACGTAAGTGCATTCAGGTAGAGAAAGCAATTTTCGATGACTGGGTTAAGGTAAACCTCAATTTTTTTTTCATGAATTCACTTATTGACAACGTGTAGCAACCAAACTATATGACTAATATTTTGTTTACTTTGTTCCATGCAGGCACACCCTCATGCTCGAGGCCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGACAGGGCAACTGGTGCGGGTGCAGAGACTCCCCATGACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACCTGCATATGACCCGACATCTGACGAGGATATGTCTGCCACACCTATATCCAGGAACGATGGGGCAGGATCATCAAGTGGGTCGAAGAGATGCAAAGTGAAACAAGGGGACATTATTGACGTATTTCGTACAGAGATGCGTTGGGCGTCAACACAACTAGAGAGAATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTATATGCAGAACTTCAAGCTATCTCTGGTATAGATATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCCTCGACTACCCAGCTGAATGGAAATACAAATGTTGCATGCGTATCTTGGGAAGGGAGGCATGA

mRNA sequence

ATGTCGTGCAACAGGGGGTGGAGAGTCGATAATGGCACATTTCGACACTGGTACTTAGTACAAGTACAAAAATTGTTCAAGCAGAAACTCCCTGAAAGCGACATACAAGTGACCCCAAACCTAGAATCTAGAGTGAAGATTCTGAAGAAGCAATACAATGCTATAGCTGAGATGATGGGGCCAGCATGTAGTGGGTTTGGGTGGAATGACGAACGTAAGTGCATTCAGGTAGAGAAAGCAATTTTCGATGACTGGGTTAAGGCACACCCTCATGCTCGAGGCCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGACAGGGCAACTGGTGCGGGTGCAGAGACTCCCCATGACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACCTGCATATGACCCGACATCTGACGAGGATATGTCTGCCACACCTATATCCAGGAACGATGGGGCAGGATCATCAAGTGGAATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTATATGCAGAACTTCAAGCTATCTCTGGTATAGATATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCCTCGACTACCCAGCTGAATGGAAATACAAATGTTGCATGCGTATCTTGGGAAGGGAGGCATGA

Coding sequence (CDS)

ATGTCGTGCAACAGGGGGTGGAGAGTCGATAATGGCACATTTCGACACTGGTACTTAGTACAAGTACAAAAATTGTTCAAGCAGAAACTCCCTGAAAGCGACATACAAGTGACCCCAAACCTAGAATCTAGAGTGAAGATTCTGAAGAAGCAATACAATGCTATAGCTGAGATGATGGGGCCAGCATGTAGTGGGTTTGGGTGGAATGACGAACGTAAGTGCATTCAGGTAGAGAAAGCAATTTTCGATGACTGGGTTAAGGCACACCCTCATGCTCGAGGCCTTAGGAACAAGCCATTTCCATACTTCGACGAGTTATCAATTATATTCGGTAAAGACAGGGCAACTGGTGCGGGTGCAGAGACTCCCCATGACATGGCCTCAGCATCGGCCACAGACGTAGATGACGACATCAACATGACTTTTCAAGATCTCCCAATCCCTGACCCACCTGCATATGACCCGACATCTGACGAGGATATGTCTGCCACACCTATATCCAGGAACGATGGGGCAGGATCATCAAGTGGAATTGCCTTGTGGCCTAAAGAGAAGGATGAACTGGAGTCGACCCGACGCAAACGACTATATGCAGAACTTCAAGCTATCTCTGGTATAGATATGGATGATTGTTTACAGATTGCTGAGACTCTGTTGGCCGATATATCCAAATTCCACTCATTCCTCGACTACCCAGCTGAATGGAAATACAAATGTTGCATGCGTATCTTGGGAAGGGAGGCATGA

Protein sequence

MSCNRGWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSGFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHDMASASATDVDDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSSSGIALWPKEKDELESTRRKRLYAELQAISGIDMDDCLQIAETLLADISKFHSFLDYPAEWKYKCCMRILGREA
Homology
BLAST of Tan0011319 vs. NCBI nr
Match: KAA0050106.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 131/271 (48.34%), Postives = 162/271 (59.78%), Query Frame = 0

Query: 6   GWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSG 65
           GWR DNGTF+  YLVQVQKL K+K+  S+IQVTPNL+SRVKILKKQY AIAEMMGPACSG
Sbjct: 32  GWRADNGTFKLGYLVQVQKLMKEKILGSNIQVTPNLKSRVKILKKQYIAIAEMMGPACSG 91

Query: 66  FGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHD 125
           FGWN+ERKCI+ EK++FDDWVK                                      
Sbjct: 92  FGWNEERKCIEAEKSVFDDWVK-------------------------------------- 151

Query: 126 MASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSS--------- 185
               +A D+ +DD+++  +D  IP+P   +P S EDM +TP S    AGSS         
Sbjct: 152 ----TARDIEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSY 211

Query: 186 SG-------------------IALWPKEKDELESTRRKRLYAELQAISGIDMDDCLQIAE 245
           SG                   IA W +EK E+ES+  KRLY +LQ I G+D+DDCL +AE
Sbjct: 212 SGDLMDTFRASMRETSKEIGKIAAWQREKMEIESSLHKRLYVDLQTIPGMDVDDCLIVAE 260

Query: 246 TLLADISKFHSFLDYPAEWKYKCCMRILGRE 248
           +LL D +  H+FLDYPAEWKY+ CMRILGR+
Sbjct: 272 SLLPDPTMLHAFLDYPAEWKYRKCMRILGRQ 260

BLAST of Tan0011319 vs. NCBI nr
Match: TYK26842.1 (uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 233.8 bits (595), Expect = 1.6e-57
Identity = 120/229 (52.40%), Postives = 152/229 (66.38%), Query Frame = 0

Query: 7   WRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSGF 66
           WRVDNGTF+  YLVQVQKL K+K+ ES+IQVTPNLES VKILKKQY  IAEMMGP CSGF
Sbjct: 119 WRVDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGF 178

Query: 67  GWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHDM 126
            WN ERKCI+ EK++ +DWVK H +AR L NKPFPYF +L I+FG+DRATG   +TP +M
Sbjct: 179 SWNKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEM 238

Query: 127 ASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSSSGIALWPKEK 186
            S +A D  +DD+ +  +D  IP+P   +P S EDM +TP S    AGSS          
Sbjct: 239 GSQTARDTEEDDMIINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSS---------- 298

Query: 187 DELESTRRKRLYAELQAISGIDMDDCLQIAETLLADISKFHSFLDYPAE 235
                ++++R Y+        D+ D  +  E+LL D +  H+FLDYP E
Sbjct: 299 ---RPSKKRRSYSR-------DLMDTFRATESLLPDPTMLHAFLDYPTE 327

BLAST of Tan0011319 vs. NCBI nr
Match: KAA0033487.1 (uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 3.6e-57
Identity = 119/229 (51.97%), Postives = 151/229 (65.94%), Query Frame = 0

Query: 7   WRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSGF 66
           WRVDNGTF+  YLVQVQKL K+K+ ES+IQVTPNLES VKILKKQY  IAEMMGP CSGF
Sbjct: 119 WRVDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGF 178

Query: 67  GWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHDM 126
            WN ERKCI+ EK++ +DWVK H +AR L NKPFPYF +L I+FG+DRATG   +TP +M
Sbjct: 179 SWNKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEM 238

Query: 127 ASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSSSGIALWPKEK 186
            S +A D  +DD+ +  +D  IP+P   +P S EDM +TP S    AGS           
Sbjct: 239 GSQTARDTEEDDMIINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGS----------- 298

Query: 187 DELESTRRKRLYAELQAISGIDMDDCLQIAETLLADISKFHSFLDYPAE 235
                ++++R Y+        D+ D  +  E+LL D +  H+FLDYP E
Sbjct: 299 --FRPSKKRRSYSR-------DLMDTFRATESLLPDPTMLHAFLDYPTE 327

BLAST of Tan0011319 vs. NCBI nr
Match: TYK07921.1 (hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 8.8e-56
Identity = 121/256 (47.27%), Postives = 153/256 (59.77%), Query Frame = 0

Query: 6   GWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSG 65
           GWR DNGTF+  YL                              KQY AIAEMMGPACSG
Sbjct: 170 GWRADNGTFKLGYL------------------------------KQYTAIAEMMGPACSG 229

Query: 66  FGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHD 125
           FGWN+ +KCI+VEK +FDDWVK HP+A+GL NKPFPYF +L ++FG+DRATG   +TP +
Sbjct: 230 FGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVE 289

Query: 126 MASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSS--------- 185
           M+S +A D  +DD+++  +D  IP+P   +P S EDM +TP S    AGSS         
Sbjct: 290 MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSY 349

Query: 186 SG-------------------IALWPKEKDELESTRRKRLYAELQAISGIDMDDCLQIAE 233
           SG                   IA W +EK E+ES+  KRLYAELQ I G+D+DDCL +AE
Sbjct: 350 SGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAE 395

BLAST of Tan0011319 vs. NCBI nr
Match: XP_031741735.1 (uncharacterized protein At2g29880-like [Cucumis sativus])

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-52
Identity = 103/169 (60.95%), Postives = 128/169 (75.74%), Query Frame = 0

Query: 6   GWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSG 65
           GWR  NGTF+  YLVQVQKL K+K+P S+IQVTPNLE RVKILKKQY AI EMMGP+CS 
Sbjct: 52  GWRAYNGTFKPGYLVQVQKLMKEKIPGSNIQVTPNLEPRVKILKKQYTAIVEMMGPSCSR 111

Query: 66  FGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHD 125
           FGWN++RKCI+ EK +FDD VK HP+ARGL NKPFPYF +L I+FG+DRATG   +TP +
Sbjct: 112 FGWNEKRKCIEAEKFVFDDLVKGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPVE 171

Query: 126 MASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAG 174
           M S +  D+ +DD+++  +D  IP+P   +P S EDMS+T  S    AG
Sbjct: 172 MCSHNTRDIEEDDMDINLEDFDIPNPHGLEPPSGEDMSSTSTSMAHDAG 220

BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5A7U7F7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001200 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 5.4e-59
Identity = 131/271 (48.34%), Postives = 162/271 (59.78%), Query Frame = 0

Query: 6   GWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSG 65
           GWR DNGTF+  YLVQVQKL K+K+  S+IQVTPNL+SRVKILKKQY AIAEMMGPACSG
Sbjct: 32  GWRADNGTFKLGYLVQVQKLMKEKILGSNIQVTPNLKSRVKILKKQYIAIAEMMGPACSG 91

Query: 66  FGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHD 125
           FGWN+ERKCI+ EK++FDDWVK                                      
Sbjct: 92  FGWNEERKCIEAEKSVFDDWVK-------------------------------------- 151

Query: 126 MASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSS--------- 185
               +A D+ +DD+++  +D  IP+P   +P S EDM +TP S    AGSS         
Sbjct: 152 ----TARDIEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSSRPSKKRRSY 211

Query: 186 SG-------------------IALWPKEKDELESTRRKRLYAELQAISGIDMDDCLQIAE 245
           SG                   IA W +EK E+ES+  KRLY +LQ I G+D+DDCL +AE
Sbjct: 212 SGDLMDTFRASMRETSKEIGKIAAWQREKMEIESSLHKRLYVDLQTIPGMDVDDCLIVAE 260

Query: 246 TLLADISKFHSFLDYPAEWKYKCCMRILGRE 248
           +LL D +  H+FLDYPAEWKY+ CMRILGR+
Sbjct: 272 SLLPDPTMLHAFLDYPAEWKYRKCMRILGRQ 260

BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5D3DTL0 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00340 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 7.8e-58
Identity = 120/229 (52.40%), Postives = 152/229 (66.38%), Query Frame = 0

Query: 7   WRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSGF 66
           WRVDNGTF+  YLVQVQKL K+K+ ES+IQVTPNLES VKILKKQY  IAEMMGP CSGF
Sbjct: 119 WRVDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGF 178

Query: 67  GWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHDM 126
            WN ERKCI+ EK++ +DWVK H +AR L NKPFPYF +L I+FG+DRATG   +TP +M
Sbjct: 179 SWNKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEM 238

Query: 127 ASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSSSGIALWPKEK 186
            S +A D  +DD+ +  +D  IP+P   +P S EDM +TP S    AGSS          
Sbjct: 239 GSQTARDTEEDDMIINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGSS---------- 298

Query: 187 DELESTRRKRLYAELQAISGIDMDDCLQIAETLLADISKFHSFLDYPAE 235
                ++++R Y+        D+ D  +  E+LL D +  H+FLDYP E
Sbjct: 299 ---RPSKKRRSYSR-------DLMDTFRATESLLPDPTMLHAFLDYPTE 327

BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5A7SW62 (Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00210 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.7e-57
Identity = 119/229 (51.97%), Postives = 151/229 (65.94%), Query Frame = 0

Query: 7   WRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSGF 66
           WRVDNGTF+  YLVQVQKL K+K+ ES+IQVTPNLES VKILKKQY  IAEMMGP CSGF
Sbjct: 119 WRVDNGTFKPGYLVQVQKLMKEKILESNIQVTPNLESGVKILKKQYTTIAEMMGPVCSGF 178

Query: 67  GWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHDM 126
            WN ERKCI+ EK++ +DWVK H +AR L NKPFPYF +L I+FG+DRATG   +TP +M
Sbjct: 179 SWNKERKCIEAEKSVSNDWVKGHLNARYLLNKPFPYFYDLEIVFGRDRATGGKCKTPVEM 238

Query: 127 ASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSSSGIALWPKEK 186
            S +A D  +DD+ +  +D  IP+P   +P S EDM +TP S    AGS           
Sbjct: 239 GSQTARDTEEDDMIINLEDFDIPNPHGLEPPSGEDMPSTPTSMAHDAGS----------- 298

Query: 187 DELESTRRKRLYAELQAISGIDMDDCLQIAETLLADISKFHSFLDYPAE 235
                ++++R Y+        D+ D  +  E+LL D +  H+FLDYP E
Sbjct: 299 --FRPSKKRRSYSR-------DLMDTFRATESLLPDPTMLHAFLDYPTE 327

BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5D3C7T4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00330 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 4.3e-56
Identity = 121/256 (47.27%), Postives = 153/256 (59.77%), Query Frame = 0

Query: 6   GWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSG 65
           GWR DNGTF+  YL                              KQY AIAEMMGPACSG
Sbjct: 170 GWRADNGTFKLGYL------------------------------KQYTAIAEMMGPACSG 229

Query: 66  FGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHD 125
           FGWN+ +KCI+VEK +FDDWVK HP+A+GL NKPFPYF +L ++FG+DRATG   +TP +
Sbjct: 230 FGWNEGQKCIEVEKPVFDDWVKGHPNAQGLLNKPFPYFYDLEVVFGRDRATGGRCKTPVE 289

Query: 126 MASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSS--------- 185
           M+S +A D  +DD+++  +D  IP+P   +P S EDM +TP S    AGSS         
Sbjct: 290 MSSQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTPTSMTHDAGSSRPSKKRRSY 349

Query: 186 SG-------------------IALWPKEKDELESTRRKRLYAELQAISGIDMDDCLQIAE 233
           SG                   IA W +EK E+ES+  KRLYAELQ I G+D+DDCL +AE
Sbjct: 350 SGDLMDTFRASMRETSKEIGKIATWQREKMEIESSLHKRLYAELQTIPGMDVDDCLIVAE 395

BLAST of Tan0011319 vs. ExPASy TrEMBL
Match: A0A5D3BC95 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00380 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 2.2e-52
Identity = 104/171 (60.82%), Postives = 130/171 (76.02%), Query Frame = 0

Query: 6   GWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACSG 65
           GWR +N TF+  YLVQVQKL K+K+P S+IQVT NLESRVK LKKQY AIA+MMGPACS 
Sbjct: 33  GWRANNETFKPRYLVQVQKLMKEKIPRSNIQVTLNLESRVKFLKKQYTAIAKMMGPACSR 92

Query: 66  FGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPHD 125
           FGWN+ERKCI+ EK++FDDWVK HP+ARGL NKPF YF +L I+FG+D+ATG   +   +
Sbjct: 93  FGWNEERKCIEAEKSVFDDWVKGHPNARGLLNKPFAYFYDLEIVFGRDKATGGRCKPFVE 152

Query: 126 MASASATDV-DDDINMTFQDLPIPDPPAYDPTSDEDMSATPISRNDGAGSS 176
           MAS +A D  +DD+++  +D  IP+P   +P S EDM +T IS    AGSS
Sbjct: 153 MASQTARDTEEDDMDINLEDFDIPNPHGLEPPSGEDMPSTLISMTHDAGSS 203

BLAST of Tan0011319 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 9.8e-13
Identity = 65/246 (26.42%), Postives = 119/246 (48.37%), Query Frame = 0

Query: 5   RGWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACS 64
           RG +++ G FR     ++  LF  K  ES+  V   L++R K L++Q+NAI  ++     
Sbjct: 204 RGNQIE-GVFRKQAWTEMVNLFNAKF-ESNFDVDV-LKNRYKSLRRQFNAIKSIL--RSD 263

Query: 65  GFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPH 124
           GF W++ER+ +  +  ++ D++KAH  AR    +P PY+ +L ++ G      +G E   
Sbjct: 264 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG-----DSGIEENE 323

Query: 125 DMASASATDVDDDINMTFQDLPIPDPPAYDPTSDEDMSAT----PISRNDGAGSSSGIAL 184
              +    D + +    FQ+           +++E+ S +    P ++ D   ++    +
Sbjct: 324 CFVAMDWFDPETE----FQEFKSSGTTDLSISAEEEDSNSLLFDPKNKRDQLANTDTSPI 383

Query: 185 WPKEKDELESTRRKRLYAELQAISGI-DMDDCLQI-AETLLADISKFHSFLDYPAEWKYK 244
            PK K  ++ T+   +   ++AI  + DMDD L + A  LL D  K  +FL    + + K
Sbjct: 384 NPK-KPRVDETQTMSIEDTVEAIQALPDMDDELILDACDLLEDKLKAKTFLALDVKLRKK 434

BLAST of Tan0011319 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 71.6 bits (174), Expect = 9.8e-13
Identity = 65/246 (26.42%), Postives = 119/246 (48.37%), Query Frame = 0

Query: 5   RGWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLESRVKILKKQYNAIAEMMGPACS 64
           RG +++ G FR     ++  LF  K  ES+  V   L++R K L++Q+NAI  ++     
Sbjct: 204 RGNQIE-GVFRKQAWTEMVNLFNAKF-ESNFDVDV-LKNRYKSLRRQFNAIKSIL--RSD 263

Query: 65  GFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGAGAETPH 124
           GF W++ER+ +  +  ++ D++KAH  AR    +P PY+ +L ++ G      +G E   
Sbjct: 264 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG-----DSGIEENE 323

Query: 125 DMASASATDVDDDINMTFQDLPIPDPPAYDPTSDEDMSAT----PISRNDGAGSSSGIAL 184
              +    D + +    FQ+           +++E+ S +    P ++ D   ++    +
Sbjct: 324 CFVAMDWFDPETE----FQEFKSSGTTDLSISAEEEDSNSLLFDPKNKRDQLANTDTSPI 383

Query: 185 WPKEKDELESTRRKRLYAELQAISGI-DMDDCLQI-AETLLADISKFHSFLDYPAEWKYK 244
            PK K  ++ T+   +   ++AI  + DMDD L + A  LL D  K  +FL    + + K
Sbjct: 384 NPK-KPRVDETQTMSIEDTVEAIQALPDMDDELILDACDLLEDKLKAKTFLALDVKLRKK 434

BLAST of Tan0011319 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 5.4e-11
Identity = 57/213 (26.76%), Postives = 94/213 (44.13%), Query Frame = 0

Query: 4   NRGWRVDNGTFRHWYLVQVQKLFKQKLPESDIQVTPNLE-----SRVKILKKQYNAIAEM 63
           N  WR  NGT      + V+  F   +PE + +   +       SR+K LK QY +  ++
Sbjct: 34  NNNWRDSNGTISK---LTVETKF---MPEINKEFCRSKNYNHYLSRMKYLKIQYQSCLDL 93

Query: 64  MGPACSGFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPFPYFDELSIIFGKDRATGA 123
                SGFGW+   K       ++ D++KAHP+ + LR   F +FDEL IIFG+  ATG 
Sbjct: 94  Q-RFSSGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFDELQIIFGEGVATGK 153

Query: 124 GAETPHDMASASATDVDDDINMTFQDLPIPDPPAYDPTSDEDMSA--TPISRNDGAGSSS 183
            A    D          ++    + D    +   YD T+  + S    P   +   G+S 
Sbjct: 154 NAIGLCDSTDGLTYRAGENPRKEYVD-DFDNVYEYDTTTHHESSEHYAPFMSH---GTSE 213

Query: 184 GIALWPKEKDELESTRRKRLYAELQAISGIDMD 210
              L P+++   E +  ++  + +  +S   +D
Sbjct: 214 SPKLPPRKRTRSERSTSQKEESPMMVVSSKILD 235

BLAST of Tan0011319 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 28/99 (28.28%), Postives = 42/99 (42.42%), Query Frame = 0

Query: 41  LESRVKILKKQYNAIAEMMGPACSGFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPF 100
           L  R   L K Y  +  ++     GF W++ R  I  + A++D ++K HP AR  R K  
Sbjct: 223 LRHRYNKLLKYYKDMEAILKE--DGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 282

Query: 101 PYFDELSIIFGKDRATGAGAETPHDMASASATDVDDDIN 140
           P +++L  IF      G         A  S T    + N
Sbjct: 283 PSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQN 319

BLAST of Tan0011319 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 28/99 (28.28%), Postives = 42/99 (42.42%), Query Frame = 0

Query: 41  LESRVKILKKQYNAIAEMMGPACSGFGWNDERKCIQVEKAIFDDWVKAHPHARGLRNKPF 100
           L  R   L K Y  +  ++     GF W++ R  I  + A++D ++K HP AR  R K  
Sbjct: 223 LRHRYNKLLKYYKDMEAILKE--DGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 282

Query: 101 PYFDELSIIFGKDRATGAGAETPHDMASASATDVDDDIN 140
           P +++L  IF      G         A  S T    + N
Sbjct: 283 PSYNDLDTIFACQAEQGTDHRDDGSAAQTSETKASQEQN 319

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0050106.11.1e-5848.34retrotransposon protein [Cucumis melo var. makuwa][more]
TYK26842.11.6e-5752.40uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa][more]
KAA0033487.13.6e-5751.97uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa][more]
TYK07921.18.8e-5647.27hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa][more]
XP_031741735.11.6e-5260.95uncharacterized protein At2g29880-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A5A7U7F75.4e-5948.34Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DTL07.8e-5852.40Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7SW621.7e-5751.97Myb_DNA-bind_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3C7T44.3e-5647.27Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BC952.2e-5260.82Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
AT4G02210.19.8e-1326.42unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.29.8e-1326.42unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G27260.15.4e-1126.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.12.3e-0628.28unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G24960.22.3e-0628.28unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 3..81
e-value: 2.1E-5
score: 25.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..184
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 3..242
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 3..242

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0011319.1Tan0011319.1mRNA