Tan0011311 (gene) Snake gourd v1

Overview
NameTan0011311
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionserine/arginine-rich splicing factor 11
LocationLG09: 7847502 .. 7850327 (+)
RNA-Seq ExpressionTan0011311
SyntenyTan0011311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCTCGTCTTCGTCGGCGACATCCTACACTTCCGATTCATCATCTTCTTCTTGTCGCCGTCGCCGACGCCGTAGAACTCGCCGTGAAAAAGATCGGGACGCACTTAGGATTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGATTCTCTATCTTCCTCCGACTCCGAATCCGATTACTCCCGGTAACCCCAGTAACTTGGAGATTTTATTTTTCTGAGTTTTATGTGGTATTTGATCCACTATAAGGAACTCTGTTGAGCCTTTTCTGATTTGTTTTTGGTTTTCCCAATCTCTTACTGGAAGTGATGTACTCTTATTTATGATTAGGTTGTTAATGAGAATCGCTTGGTAAGAGAACATGATCTCCTGGTTCAGAATTTGAAATTTATGGCTTTTTCTGTTTAGGAAGCTAAGAATTTAGGGCTGAGTTTGTACTTCCTACTCTTTTGAAAAGGAAAATGAAAATATGTTCACCTCTTGTTTCTATGTTATATTTAAATTTTCCAGTATTTATTATATATTTTGTAAATAAACATGTTAAAATAATGCTTTTGTTTTTGTATTTTTTTTTTTTTTTGAAAAACCGAGAACCAAAACAAGAAACAAAATTAGATTTTGGTGTTTTTAAAATTTGTATACAATGTTGGGAACATTTTTATAGTTGGCTCCCTTGTATTCTTTCATTTTTATTAAAAATGAAAGCTGGGTTTTCATAAAAAAAAAAACACTTATATTCTCAATAATAAAAAATAAGAAATAGAAAACGAGAATGGAAACTTTACCCCGTGATCCCTTAAAGTCCCGGGTGAAGAAATCAAGGATCAATTGGTTTAAGCTTAAAAACATAGGACTTTCTGTTTCTTTAATGAAATTTATTTGATGTTATGGCTGGATTATGGTGGTTTTCTAATTTATACTTGCCAAGATCATGTCCCAGTGAGTGGTGTTGCTGGTTTCCCAGTCAATTATTTTTTCATAGCACATGTTATGTACCCAAGATCATTCTTACTAGTCCTTGTATATAAATGTAGAAGCGATAGCTCCTCTCAAAGCGAGCCCGAAACATCAGGTCGTTCAAAGCGGCATAAGAAGAATGATAGATCGAAGAAGGTAGATGTTTTTTATATACAAACTTTTCTCTTTGGCTTTGTGTGTTGGCTTTGTAGTTTAACTTGATGATTTTCACCCTGTTATTGTTACTGTCGCTGTGCACCTTAGGATAAGGAGAGGGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAGCATAAAGCTAAAGAGGTAGACCACTTGCCTGTTTGTGTACTATTTTTCCCTTTGTTGTTGTTAATGCTGTACTTTCAATGAACTGAGGAATGCCATGGAAATCACCTCTTTTGCATCATGGATTTTACCTGTATTTACATCTTCTTGACACATTACTTCATAACATATAGTGACAAAGTAGATGTAGATTTTTAACACATGTACCCAATGTCTTAGATTTTAATTCAGAAGAGGTGAGATGTAAGCTTTGAGGTAGTATGAGACATAAGCCTCAATTTAAATAAAAATATTAATGAACATATTGTAATAAAGATTTTTAGAAGTCAAGTTTCTATCTTCAACGTATATTTGGTCCTGGGTAGTAAAAGTATTAACGACCTGAATTACCATAACTCAGTGTAAAGAATAAGCATCAACTTAATACTATTCTCCTAATTATTACACGAGGTGTTAAGGCTCTTTGTTATAAAAAAGGTGTTAAGGCTTCAAGCATCAGTGTGTTCAATTAGAGGTGCGAGCCTTAATTCAAAAAAAAAAAAAAAAGAAGAAGAAAAAGAAGAAGAAGAAACGCAAGCCTCATATATGCAAGGCCTAACCACTTATAATCTAAAGAAGGTATAAGCTTTGAGGCTAAAAGTTTGAGCCTCTCTAAGAAAGACAAGCATGCAATCTTTAGACTAAAGCTGAAAGTAATGATCTATTTGCCAAATTATCTTTTTTTTTTAGTCATGCAATCTTTAGACTACATCTATGATTGGTTTTCTTTTTAGAGTGGTTTCTGAATTGGATATAATGTGAGTCGTTTCTATGACTATTTACTGATTGATTCTTTGAACTTGGAGTTGGGGTCTGTGGCATGATGATCGGGCTGTTGATTGACTTGCCTGAATGGTTTGTTGTACGGATTTGTCCTGGCATTTGGAGTCGACGTATAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGGTTCCCTTCACAGCATTGTTTATTTTCAATTCTTTTCTTTCTTGGCATCTCGTATTACAGTTGCTTCATGTATTTAACAGTTTTTAGCACGGGAGAAGGATGATGGTGCTCGGCGGAGTGCTGTCTCTGGAAAAAAGGTTAAAGATCCACCTCTTGTTTTTGCACATGTTTGGAAATGCTTGTCGTAGTTAGAACTTAAAAAGTACTTTTGCCTCGTCCAAAAACACTTCTCACTTAAACTCGTAAAATTTGGGGATTTAAAAATGATTTCACAAAAGGTCATAGGCGAAGTGTTAAAAGTGCTTTGTGAGGAGGGAGTACATGGAAAGTGCTTTTGACCAAAGTGATTGTTGAAGAAGCACTTTGAAGTGTATTGTCCCTCTCAAACGCCCTTTAATAATGTTCCTGTAATTGACAATTTAGTTTTCACTATGTTTTTTTTTTTTTTTTTTTGATATTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAAGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

ATGGCGGCCTCGTCTTCGTCGGCGACATCCTACACTTCCGATTCATCATCTTCTTCTTGTCGCCGTCGCCGACGCCGTAGAACTCGCCGTGAAAAAGATCGGGACGCACTTAGGATTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGATTCTCTATCTTCCTCCGACTCCGAATCCGATTACTCCCGAAGCGATAGCTCCTCTCAAAGCGAGCCCGAAACATCAGGTCGTTCAAAGCGGCATAAGAAGAATGATAGATCGAAGAAGGATAAGGAGAGGGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAGCATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTGCTCGGCGGAGTGCTGTCTCTGGAAAAAAGGTTAAAGATCCACCTCTTGTTTTTGCACATGTTTGGAAATGCTTTTTTCACTATGTTTTTTTTTTTTTTTTTTTGATATTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAAGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

Coding sequence (CDS)

ATGGCGGCCTCGTCTTCGTCGGCGACATCCTACACTTCCGATTCATCATCTTCTTCTTGTCGCCGTCGCCGACGCCGTAGAACTCGCCGTGAAAAAGATCGGGACGCACTTAGGATTCGCAAGAAGTCTCGCTCTCATTCTAAACGCCGTCGCAGGCACCGCCGCTCCTCCTCCGATTCTCTATCTTCCTCCGACTCCGAATCCGATTACTCCCGAAGCGATAGCTCCTCTCAAAGCGAGCCCGAAACATCAGGTCGTTCAAAGCGGCATAAGAAGAATGATAGATCGAAGAAGGATAAGGAGAGGGAGCGAAGTAAGAGTCATCACCATAAAAGGCGTAAGCATAAAGCTAAAGAGAAACAGCCAGAAGAGAGAAGTAGCAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTGCTCGGCGGAGTGCTGTCTCTGGAAAAAAGGTTAAAGATCCACCTCTTGTTTTTGCACATGTTTGGAAATGCTTTTTTCACTATGTTTTTTTTTTTTTTTTTTTGATATTGTTGAAACTTGATAAATCAAAGGAAGACAAAGCTGAAGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

Protein sequence

MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLILLKLDKSKEDKAEENKRNELLKFLNSSFD
Homology
[Close]
BLAST of Tan0011311 vs. NCBI nr
Match: XP_022136184.1 (serine/arginine-rich splicing factor 11 [Momordica charantia])

HSP 1 Score: 266.9 bits (681), Expect = 1.4e-67
Identity = 176/208 (84.62%), Postives = 181/208 (87.02%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSATS+TSDSSSSS RRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSSDS
Sbjct: 1   MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSES+YSRS SSSQSEPETSGRSKRHKKNDR+KKDKERERSKSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLAREKDDGARRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 183

[Close]
BLAST of Tan0011311 vs. NCBI nr
Match: XP_038879353.1 (NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Benincasa hispida] >XP_038879355.1 NKAP family protein [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 4.3e-64
Identity = 170/208 (81.73%), Postives = 177/208 (85.10%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSATSYTSDSSSSS RRRRRRR RREKDRD LR+RKKSRSHSKR RRHRRSSSDS
Sbjct: 1   MAASSSSATSYTSDSSSSSSRRRRRRRARREKDRDTLRVRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDYSR++SSSQSEPETSGRSKRHK+NDR+K+DKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRTNSSSQSEPETSGRSKRHKRNDRAKRDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEE SSSPVQLSKFLAREKDDG RRSAVSGKK                         IL
Sbjct: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 182

[Close]
BLAST of Tan0011311 vs. NCBI nr
Match: XP_008450603.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo])

HSP 1 Score: 248.8 bits (634), Expect = 4.0e-62
Identity = 168/208 (80.77%), Postives = 175/208 (84.13%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSS+ TS +SDSSSSS RRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSSDS
Sbjct: 1   MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDY+RS+SSS+SEPETS RSKRHKKNDR+KKDKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEE SSSPVQLSKFLAREKDDG RRSAVSGKK                         IL
Sbjct: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 182

[Close]
BLAST of Tan0011311 vs. NCBI nr
Match: XP_023531665.1 (probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7022362.1 hypothetical protein SDJN02_16093 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 170/208 (81.73%), Postives = 173/208 (83.17%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  KERERSKS HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--KERERSKSRHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 180

[Close]
BLAST of Tan0011311 vs. NCBI nr
Match: XP_022970036.1 (probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita maxima])

HSP 1 Score: 243.4 bits (620), Expect = 1.7e-60
Identity = 170/208 (81.73%), Postives = 173/208 (83.17%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  KERERSKS HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--KERERSKSQHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 180

[Close]
BLAST of Tan0011311 vs. ExPASy TrEMBL
Match: A0A6J1C3K8 (serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111007940 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.9e-68
Identity = 176/208 (84.62%), Postives = 181/208 (87.02%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSATS+TSDSSSSS RRRRRRR+RR+KDRDALRIRKKSRSHSKRRRRHRRSSSDS
Sbjct: 1   MAASSSSATSFTSDSSSSSSRRRRRRRSRRDKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSES+YSRS SSSQSEPETSGRSKRHKKNDR+KKDKERERSKSHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESEYSRSGSSSQSEPETSGRSKRHKKNDRTKKDKERERSKSHHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLAREKDDGARRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 183

[Close]
BLAST of Tan0011311 vs. ExPASy TrEMBL
Match: A0A1S3BQ85 (peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.0e-62
Identity = 168/208 (80.77%), Postives = 175/208 (84.13%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSS+ TS +SDSSSSS RRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSSDS
Sbjct: 1   MAASSSATTSNSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDY+RS+SSS+SEPETS RSKRHKKNDR+KKDKERERS+SHHHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYARSNSSSESEPETSSRSKRHKKNDRTKKDKERERSRSHHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEE SSSPVQLSKFLAREKDDG RRSAVSGKK                         IL
Sbjct: 121 QPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 182

[Close]
BLAST of Tan0011311 vs. ExPASy TrEMBL
Match: A0A6J1HZG5 (probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 8.2e-61
Identity = 170/208 (81.73%), Postives = 173/208 (83.17%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  KERERSKS HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--KERERSKSQHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 180

[Close]
BLAST of Tan0011311 vs. ExPASy TrEMBL
Match: A0A6J1I4D4 (NKAP family protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 3.1e-60
Identity = 169/208 (81.25%), Postives = 172/208 (82.69%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +KK   RERSKS HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTKK---RERSKSQHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKK-------------------------IL 179

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 179

[Close]
BLAST of Tan0011311 vs. ExPASy TrEMBL
Match: A0A6J1EV15 (serine/arginine-rich splicing factor 11 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437872 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 3.1e-60
Identity = 169/208 (81.25%), Postives = 173/208 (83.17%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRRRRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSSDS 60
           MAASSSSA+ YTSDSSSSS RRRRRRRTRREKDR+ALRIRKKSRSHSKRRRRHRRSSS+S
Sbjct: 1   MAASSSSASPYTSDSSSSSSRRRRRRRTRREKDRNALRIRKKSRSHSKRRRRHRRSSSNS 60

Query: 61  LSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAKEK 120
           LSSSDSESDYSRS SSSQSEPE SGRSKRHKKND +K  KERERSKS HHKRRKHKAKEK
Sbjct: 61  LSSSDSESDYSRSHSSSQSEPEMSGRSKRHKKNDGTK--KERERSKSRHHKRRKHKAKEK 120

Query: 121 QPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFLIL 180
           QPEERSSSPVQLSKFLARE DDG RRSAVSGKK                         IL
Sbjct: 121 QPEERSSSPVQLSKFLARE-DDGTRRSAVSGKK-------------------------IL 180

Query: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 209
           LKLDKSKEDKAEENKRNELLKFLNSSFD
Sbjct: 181 LKLDKSKEDKAEENKRNELLKFLNSSFD 180

[Close]
BLAST of Tan0011311 vs. TAIR 10
Match: AT5G27860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32
Identity = 116/210 (55.24%), Postives = 142/210 (67.62%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS 60
           MAASSSS++S  S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+RRR R+ SS
Sbjct: 1   MAASSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRR-RQHSS 60

Query: 61  DSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAK 120
           DS       SD S SDSSS+S      +S+RHKK+++ KK K++ERSKSH HKR K++ +
Sbjct: 61  DS-------SDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRER 120

Query: 121 EKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFL 180
           +K   E SS PV+LSKFL R+KDDG RRSAVSGKK                         
Sbjct: 121 KKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKK------------------------- 177

Query: 181 ILLKLDKSKEDKAEENKRNELLKFLNSSFD 209
           ILLK+DKSKEDKA E+KRNELLKFLN+SFD
Sbjct: 181 ILLKVDKSKEDKAAESKRNELLKFLNASFD 177

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BLAST of Tan0011311 vs. TAIR 10
Match: AT5G27860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 23049 Blast hits to 11981 proteins in 648 species: Archae - 2; Bacteria - 589; Metazoa - 13464; Fungi - 1977; Plants - 1635; Viruses - 89; Other Eukaryotes - 5293 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32
Identity = 116/210 (55.24%), Postives = 142/210 (67.62%), Query Frame = 0 

Query: 1   MAASSSSATSYTSDSSSSSCRRR--RRRRTRREKDRDALRIRKKSRSHSKRRRRHRRSSS 60
           MAASSSS++S  S  SS S RRR  RR   R ++DRD+L++RKKSRS SK+RRR R+ SS
Sbjct: 1   MAASSSSSSSDVSSDSSDSHRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRR-RQHSS 60

Query: 61  DSLSSSDSESDYSRSDSSSQSEPETSGRSKRHKKNDRSKKDKERERSKSHHHKRRKHKAK 120
           DS       SD S SDSSS+S      +S+RHKK+++ KK K++ERSKSH HKR K++ +
Sbjct: 61  DS-------SDSSYSDSSSESSDSEHEKSRRHKKHEKPKKAKDKERSKSHRHKRHKNRER 120

Query: 121 EKQPEERSSSPVQLSKFLAREKDDGARRSAVSGKKVKDPPLVFAHVWKCFFHYVFFFFFL 180
           +K   E SS PV+LSKFL R+KDDG RRSAVSGKK                         
Sbjct: 121 KKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKK------------------------- 177

Query: 181 ILLKLDKSKEDKAEENKRNELLKFLNSSFD 209
           ILLK+DKSKEDKA E+KRNELLKFLN+SFD
Sbjct: 181 ILLKVDKSKEDKAAESKRNELLKFLNASFD 177

The following BLAST results are available for this feature:
BLAST of Tan0011311 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0011311 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022136184.11.4e-6784.62serine/arginine-rich splicing factor 11 [Momordica charantia][more]
XP_038879353.14.3e-6481.73NKAP family protein [Benincasa hispida] >XP_038879354.1 NKAP family protein [Ben... [more]
XP_008450603.14.0e-6280.77PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo][more]
XP_023531665.11.7e-6081.73probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita pepo subs... [more]
XP_022970036.11.7e-6081.73probable splicing factor, arginine/serine-rich 7 isoform X1 [Cucurbita maxima][more]
BLAST of Tan0011311 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C3K86.9e-6884.62serine/arginine-rich splicing factor 11 OS=Momordica charantia OX=3673 GN=LOC111... [more]
A0A1S3BQ852.0e-6280.77peptidyl-prolyl cis-trans isomerase G OS=Cucumis melo OX=3656 GN=LOC103492142 PE... [more]
A0A6J1HZG58.2e-6181.73probable splicing factor, arginine/serine-rich 7 isoform X1 OS=Cucurbita maxima ... [more]
A0A6J1I4D43.1e-6081.25NKAP family protein isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469042 PE=4 ... [more]
A0A6J1EV153.1e-6081.25serine/arginine-rich splicing factor 11 isoform X1 OS=Cucurbita moschata OX=3662... [more]
BLAST of Tan0011311 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G27860.12.7e-3255.24unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G27860.22.7e-3255.24unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..149
NoneNo IPR availablePANTHERPTHR35760SI:CH211-22I13.2coord: 1..155
coord: 179..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0011311.1Tan0011311.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016853 isomerase activity