Tan0011178 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGCGGCTCAGGTTGATCCTCACGACAAGATGAGGTCCAGAGACGTTAGCAAGGTGGCTCGGGGCGAGCAAGCCCCGAGGCCCGCTCACGAATACGGCACCGTTTCAAAGCCTCCGCCTCCTTCTTCCAGCTCCTCCGTTTCCTCCACTCAGACCAACCTCCAGCATAACGGCGATCGCCGCGGTGGTGGTGAAGATAAAGACAATAAGGTCTCTTCTCTTTCTTTTTCCTTCTCTTCATGTGCTTGGAAAAATTAGGGTAAGTTACGATTTTATTTTTTAAATTTGTGTAATAAATCAATAATATAAATATTTAAATTTTTTAAAAAATAATTGATGTATTCAATATAAAATATATAAAATTGGAATTTGTGTTTTATAAGATAACATAATTTTTTATTTTGTGTTTATTAGTAGGTACCTAAATTTCAAAACAGGTAAAATTATGTCCAGGACTTCTTAAACACACAATAGAAAATATAAAAATATAAAATTTTGATAATCATTTTAGCTTTTAGTTTTGGGTTTTTTAAAATTATTTTGGCCTTTTCACAATTTATCTTCATCTTTCCCGTAATAATTTCTATCTCCATTTCTATTTCTATTTGCTTGGGGTAAGTTTACAGTCAAATTTTAAAAATAAAAATATATATTTTTTTTTTCAAAATTTAGTTTGGTTTTTGAAAACCATATAGAACTCTATTGGTAGTAGTAATATTTGTAGGCTTAATTTTTAAAAAGATTATCCAACGGGATCCTAGGTACACAAAATTAGAAGTTTAAATTTTAAAATAAGTGGAAGATTTGGTACACAAAATTAGAAGTTTCAATTTTAAAATGCGTTGAAGATTTATTAAACATGAAAGTGAAAATTTAAGTACTCAACACAAAATTGAAAGTTTAATATGTGAAGTTTAGAGATCTATGGAAGAGTTTTTAAAGTTCAAAGAACAAGTAGAAAAATTTAAACATGAACGTCCTGTAATTTAGTTCTCTAGAGAAATACACTAATTTTAATGAACTCTTTTTTAAGTACAACTTTAATTAGCTCTTGCCTATTTGGACTTCTTAGGATGACATAAAGTCATCTCATTGAAACAATAAGTTCTCATTTCATTCAACATAGGAAATTATAAATTAGCTTTTAACACAAAGTTATATTTCAAAGCTAGATTATTATTCAAAGCAACTAAATTGCCTTCTTTGAATAACCTTTCCTTTATTATGTTACTACTTTTATTGATTTTTTTTTTAAAGTGGTGGTTCATGTTTTTTCAATTAAAATATTATTTTCAGGTGTCAATCTGAGCTTAATTTAATTGGCAAGAGCGAGAGGTTAGGGTTCCCTAATTTCTTAGTTTAGTTTTAAAAAAAGAATAACTATTACATTTGGCTGCATTTTTCTAAAATTGTTTTTTTTACAAAATTGGTCCATACCCCAAAAAAGTGATTCTCAGAGTACATCGTTGGAGTGTTTTAAAATTAATTTGATTTTTTTTAATTTCTTTTATTTGTTACCCAATATATGGTAGTTTTTTATTTTTATTTTGTGGGACCCAAACAGTGTAGAAGTGAAATACTCTTTGAAGTTTTGTTTGAGAGAGTGGATTTTCACCTTTATCTGTAAAAATAACACTTATAAGAAAGGCAATATGAAGATTGAGGGGGAGATTATTATTGAAGGGCCTTGAAGTTCAAATACCTATTTTCCCTAATTCCTACTCACTTTTGATTTGATCCAAAATTTTATTTTATTTTTTTTTAGTCCTAATTAACTTGTGTGGGGTGGAATCTTTATGCTTATAATTAAGAAATTACAAACCAATTTCCATTGTATTATATGCAAATGGTGGACTCACCAAATATTTGGCTCTTGATTTAGGTGCTTGCAGAAGAAGGGGGAACATGCGCCTGAATGCGATAAATTTGCCAAGTCAAGTATTATCGTGTTCTCTTTGTTTTGGTGAATGGGTAAGAAAATAATTTATAATTGACTTTCTAGTTCTACTGTTGTTTTGCACCATTGTGAAAATCTACCATTCAAACTTTTGTTAAGTTTTACCTTCATTAATTCCTAAGAAGTTATATCATTTTGGTTTTTTTACTGTGGTTCCATTTTGGTTATATGCTTTTAAATGTTTAATTTTAGTCTATGTATTTTTAATAAAATTTAAAATTGGTCCATAAGATGCTAGGATGAGTTTGAAGTTAATTTTGATCAAAATCAGTTCAATAATGATAATTTTAAGACAAGAAAAGAGACCATGAGATTTCTTTTTTAATTATTATTATTAAAATTCACAATAAACTAAGAGAGAGACTGATTTTAAGCCCAATGCACTTATTGGAAGTACATATATTAAAATTAGACAATAGAAGGTAATACAGTGACCAAAATGAATATCACAAACTTTTTATTCTAGATGCCATAGAGGTTTACTCGGGGAAATTGTAATTTCCGGTCCCTTTTAATTTTGTAATTGAATTTAGACCCCTATTTCAAATTCTGAATTTTTTGACCTTATGATGATGAAAATGAGGTAATAAAGAGCAAATGCATGAGATGAAATTGCCTATTTGTCTTTCATCCATATATATTATATTAAATATATTCATTACCATTAATACACTTTCAACTATCCAACAACTTCAACAAACTAATTAACTATATAAAACAAATACTTCTCTAAAACATTTTCATATATTTTAATGTCACATTCTATCTCTTCATTTGCTTCAAAATATCTCAAAGTTAAATCTATACTTATATACACAATACTTATATAACAAGTAAGTATTTTACTGCGTGCAGATTGAGAAATGGGAACCAGCAAAGGGAGCTTGGTATATAA ATGTCGGCGGCTCAGGTTGATCCTCACGACAAGATGAGGTCCAGAGACGTTAGCAAGGTGGCTCGGGGCGAGCAAGCCCCGAGGCCCGCTCACGAATACGGCACCGTTTCAAAGCCTCCGCCTCCTTCTTCCAGCTCCTCCGTTTCCTCCACTCAGACCAACCTCCAGCATAACGGCGATCGCCGCGGTGGTGGTGAAGATAAAGACAATAAGGGTAAGTTACGATTTTATTTTTTAAATTTGTGCTTGCAGAAGAAGGGGGAACATGCGCCTGAATGCGATAAATTTGCCAAGTCAAGTATTATCGTATTGAGAAATGGGAACCAGCAAAGGGAGCTTGGTATATAA ATGTCGGCGGCTCAGGTTGATCCTCACGACAAGATGAGGTCCAGAGACGTTAGCAAGGTGGCTCGGGGCGAGCAAGCCCCGAGGCCCGCTCACGAATACGGCACCGTTTCAAAGCCTCCGCCTCCTTCTTCCAGCTCCTCCGTTTCCTCCACTCAGACCAACCTCCAGCATAACGGCGATCGCCGCGGTGGTGGTGAAGATAAAGACAATAAGGGTAAGTTACGATTTTATTTTTTAAATTTGTGCTTGCAGAAGAAGGGGGAACATGCGCCTGAATGCGATAAATTTGCCAAGTCAAGTATTATCGTATTGAGAAATGGGAACCAGCAAAGGGAGCTTGGTATATAA MSAAQVDPHDKMRSRDVSKVARGEQAPRPAHEYGTVSKPPPPSSSSSVSSTQTNLQHNGDRRGGGEDKDNKGKLRFYFLNLCLQKKGEHAPECDKFAKSSIIVLRNGNQQRELGI Homology
BLAST of Tan0011178 vs. ExPASy Swiss-Prot
Match: Q9LPJ2 (Putative cytochrome c oxidase subunit 6b-like OS=Arabidopsis thaliana OX=3702 GN=At1g32710 PE=3 SV=2) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0
BLAST of Tan0011178 vs. NCBI nr
Match: XP_038886888.1 (putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]) HSP 1 Score: 140.6 bits (353), Expect = 8.6e-30 Identity = 86/142 (60.56%), Postives = 94/142 (66.20%), Query Frame = 0
BLAST of Tan0011178 vs. NCBI nr
Match: XP_031737981.1 (cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]) HSP 1 Score: 137.5 bits (345), Expect = 7.2e-29 Identity = 84/145 (57.93%), Postives = 94/145 (64.83%), Query Frame = 0
BLAST of Tan0011178 vs. NCBI nr
Match: XP_031737980.1 (putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]) HSP 1 Score: 132.5 bits (332), Expect = 2.3e-27 Identity = 78/123 (63.41%), Postives = 84/123 (68.29%), Query Frame = 0
BLAST of Tan0011178 vs. NCBI nr
Match: XP_008465918.1 (PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo] >KAA0038526.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa] >TYK31123.1 putative cytochrome c oxidase subunit 6b-like [Cucumis melo var. makuwa]) HSP 1 Score: 131.7 bits (330), Expect = 4.0e-27 Identity = 82/146 (56.16%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Tan0011178 vs. NCBI nr
Match: XP_022973259.1 (cytochrome c oxidase subunit 6b-3-like [Cucurbita maxima]) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23 Identity = 72/132 (54.55%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of Tan0011178 vs. ExPASy TrEMBL
Match: A0A0A0LEH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G910720 PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 3.5e-29 Identity = 84/145 (57.93%), Postives = 94/145 (64.83%), Query Frame = 0
BLAST of Tan0011178 vs. ExPASy TrEMBL
Match: A0A5D3E4S8 (Putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004020 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27 Identity = 82/146 (56.16%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Tan0011178 vs. ExPASy TrEMBL
Match: A0A1S3CQ05 (putative cytochrome c oxidase subunit 6b-like OS=Cucumis melo OX=3656 GN=LOC103503497 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27 Identity = 82/146 (56.16%), Postives = 90/146 (61.64%), Query Frame = 0
BLAST of Tan0011178 vs. ExPASy TrEMBL
Match: A0A6J1IE20 (cytochrome c oxidase subunit 6b-3-like OS=Cucurbita maxima OX=3661 GN=LOC111471817 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 5.8e-24 Identity = 72/132 (54.55%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of Tan0011178 vs. ExPASy TrEMBL
Match: A0A6J1F3D0 (cytochrome c oxidase subunit 6b-3-like OS=Cucurbita moschata OX=3662 GN=LOC111439604 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.6e-24 Identity = 74/132 (56.06%), Postives = 82/132 (62.12%), Query Frame = 0
BLAST of Tan0011178 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein ) HSP 1 Score: 70.9 bits (172), Expect = 7.8e-13 Identity = 41/96 (42.71%), Postives = 58/96 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|