Tan0011160 (gene) Snake gourd v1

Overview
NameTan0011160
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDUF4413 domain-containing protein
LocationLG06: 26571159 .. 26573354 (+)
RNA-Seq ExpressionTan0011160
SyntenyTan0011160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCAAGAACGATTACTAAGTTTGAAAAATATTGGAGTGTGATTCACGGTGTTCTGGCAATAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATTGAATTTTATTTTCCACAAATCTATGGACCTGCTCACTATGTTGTTGAAATGCAACGTGTTCGAGATATGTGTAGAGATTTAATGAAGTATTATATGTCAACTTCAAGTACAGAAGGAGACTCTTCATGTTCTACCATTACTTCAAGGCAAGTGAGTAGTTCTAGTTCTCTTAGTCAGAAGAAAGATCGATTTCTCAAGTTTGATGAGTTTATTAACAATGTTGCTAATGTTGATAATGCCAAATCAGAGTTAGATCTGTATTTAGAGGAAAGTCTTTTACCCAGATCTGATGACTTTGATATTTTGAGTTGGTGGAAGTTAAATGGGGTAAAGTACCCTATTTTGTATCAAATTGCCAAAGATATTTTAGTTGTTCATGTCATTAATGTTGCTTCAGAGTCTGCATTTAGTATTGGTGGTAGACACGTAGGTCCACATCGTTCTCAAATTCATTCTGCCTTACTAGAAGCTTTGATGTGTGCTCAGGATTGGCTCTGGGCTGAAGGTATGATTAATTTATTTTAAATAAATTGTTATTATCATCTAAAATGTTTTGTTATTTTTATCATCATTTAAGAATTGTTATGTGGACTTGGAATAGATACAAATACTCCAATAGATGGCAAAGTGTTGAAAACTATTCTCCAAGATCGAGATCCAGATGATGTAGTAAGTAATTGTAGAATTAGTTTGTGTCACTAAATAACTTTTTTAATTGTAGAATTTGTAATAACATTTTTCAATATTTGTTTTTCAGGAATAATGTGCTATAAATCCTAATGATTGAAGGATGGATACCTAAAGCTATGTTGTTTGTTGTACTGTGGTCGATTTCATTACTGAAACTAAGTGTAATATTTGAATTAAAGATTTCGTTGAAAACTATGTTTTTAACTTGTTGAAGACTATTTTTCTTTTCTTTTTTCAGATTGTAATGTTTAATTGTGTTTGAATTATTGTGGTTGAATGCTTTATTTTTAGTATAATGTTGGTTGAAATTTTAACTATATGTATTTTTGCTTATGGGTTGGTTTTTATTAATTAATTATATATATATATATATATTGGCATTCTATAATCTACTCTTTAAATATAAAGGTTGGTAATAGAAATCATCTATTTGAATGTATTAAAAAATAATATATTAATTTTTTTAAAAAAATCTATTATTTTAAAAAATTAAACAAATGGGGAAATTTCCCGCGGGGAATCCCCGCCCCGTCCCCTATGAAAATAAATGGTGAATTTTGCGGGGACGGGGAAGTTTTCCCGTCCCCGCCTCGCCCCGTGGACACCTCTACTTATATCGTTGGAGCTTCTAATCTGTAGGTTCATTAGGTCAACTCCCTAGCTCGTAAATGGTTATGAGATTGCTAGATCTTAATTAAAATTTGAAAATTTCAAATTCACTTTGGGAATTAATTTTTTGTATGAAAATACATTATAATATAAAGTTTTTATATTGATTAAAAACTTATTATATAAATTTAATTTTGGATATGATTCAAAGTTAAAGTTTGAGAGAATTAAATATTTGAAATAGTTTGAGTATTGTTTTAATGTGAATAAGATTCATGTTAAAAACTATAGATTAAATTTTAATGCACATAAGATGTACATTAAAACTATAGATCAAGGGAGAATGATTACTAAATGTGATTTAATCATAATAGCCTAAATTAATATATGATATTTAATTTATAAATTAATTAATTAGATAATTAATTAATTTGTAAGTTTAACTAACTTAATTAAATTTGATTTAATTAAATTAATTAAAACTATAAGTTATAATAGATATGCATTTAATATGATTTAAATGTTAATTAATCTGATTAAATGTTAACTAAATTAATTAAATTAAAATTAAGGGAACGTGTATTACGCACGTTCCCACTCTCTCACTAAGCCAACATTATCTCCCCCTTCCTCTATTGATAAAACAAATGGGAGTTGGGAGAGAGATGGTTGAACAACCGTCGTGAAAACAAGCTTTTTTTCGTTTTGGAAAGAAAATTCTTTCTTAAAAGTTTCCATAGTTTTTTAGATAGATTTCCCACAAAATCTCTATCAAAAGAACTCAGAGAATAA

mRNA sequence

ATGGCTTCAAGAACGATTACTAAGTTTGAAAAATATTGGAGTGTGATTCACGGTGTTCTGGCAATAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATTGAATTTTATTTTCCACAAATCTATGGACCTGCTCACTATGTTGTTGAAATGCAACGTGTTCGAGATATGTGTAGAGATTTAATGAAGTATTATATGTCAACTTCAAGTACAGAAGGAGACTCTTCATGTTCTACCATTACTTCAAGGCAAGTGAGTAGTTCTAGTTCTCTTAATACAAATACTCCAATAGATGGCAAAGTGTTGAAAACTATTCTCCAAGATCGAGATCCAGATGATGTAGTAAGTAATTATAGATTTCCCACAAAATCTCTATCAAAAGAACTCAGAGAATAA

Coding sequence (CDS)

ATGGCTTCAAGAACGATTACTAAGTTTGAAAAATATTGGAGTGTGATTCACGGTGTTCTGGCAATAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATTGAATTTTATTTTCCACAAATCTATGGACCTGCTCACTATGTTGTTGAAATGCAACGTGTTCGAGATATGTGTAGAGATTTAATGAAGTATTATATGTCAACTTCAAGTACAGAAGGAGACTCTTCATGTTCTACCATTACTTCAAGGCAAGTGAGTAGTTCTAGTTCTCTTAATACAAATACTCCAATAGATGGCAAAGTGTTGAAAACTATTCTCCAAGATCGAGATCCAGATGATGTAGTAAGTAATTATAGATTTCCCACAAAATCTCTATCAAAAGAACTCAGAGAATAA

Protein sequence

MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCRDLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLNTNTPIDGKVLKTILQDRDPDDVVSNYRFPTKSLSKELRE
Homology
BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0

Query: 8   KFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCRDLMKYY 67
           KF+KYW   + VLAIA  +DPRFKM+++EF + +IYGP      ++ V D   DL K Y
Sbjct: 472 KFDKYWKDCNVVLAIAVAMDPRFKMKMVEFAYSKIYGPTDAAKYVKLVDDAILDLYKEY 530

BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.4e-07
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0

Query: 8   KFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYG--PAHYVVEMQRVRDMCRDLMKY 67
           +F+KYW   + VLAIA V+DPRFKM+L+EF + +IYG   A YV   + V D   +L K 
Sbjct: 503 RFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYV---KVVDDAVHELYKE 562

Query: 68  YMS 69
           Y++
Sbjct: 563 YVA 562

BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0

Query: 8   KFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYG--PAHYVVEMQRVRDMCRDLMKY 67
           +F+KYW   + VLAIA V+DPRFKM+L+EF + +IYG   A YV   + V D   +L   
Sbjct: 503 RFDKYWKDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAKYV---KVVDDAVHELYNE 562

Query: 68  YMS 69
           Y++
Sbjct: 563 YVA 562

BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06
Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MA     KFEKYW V +  LA+A  LDPR+K  LIEFY  + +G ++ V     V D  R
Sbjct: 558 MAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKV----HVDDFVR 617

Query: 61  DLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLNTNTPIDGKVLKTILQDRDPDDVVSN 119
            + K Y   SS    S+  T T+   S   +L  N   D +    + + +D D V SN
Sbjct: 618 VIRKLYQFYSSC-SPSAPKTKTTTNDSMDDTLMENE--DDEFQNYLHELKDYDQVESN 668

BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06
Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MA     KFEKYW V +  LA+A  LDPR+K  LIEFY  + +G ++ V     V D  R
Sbjct: 527 MAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKV----HVDDFVR 586

Query: 61  DLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLNTNTPIDGKVLKTILQDRDPDDVVSN 119
            + K Y   SS    S+  T T+   S   +L  N   D +    + + +D D V SN
Sbjct: 587 VIRKLYQFYSSC-SPSAPKTKTTTNDSMDDTLMENE--DDEFQNYLHELKDYDQVESN 637

BLAST of Tan0011160 vs. NCBI nr
Match: KGN44253.1 (hypothetical protein Csa_016011 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.3e-25
Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 0

Query: 8   KFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCRDLMKYYM 67
           ++EKYWSVIHGVLAIATVLDPRFKMRLIEFYF QIYG +HY+VE++RVR++C DLMK Y 
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYG-SHYIVEIERVRELCCDLMKVYS 65

Query: 68  STSS-TEGDSSCSTITSRQVSSSSS---LNTNTPIDGKVLKTILQDRDPDDVVSNYRFPT 125
           S SS  E   S S  TS++  SSS     N +TP+D KVL+ +  D+D DD   +  FPT
Sbjct: 66  SKSSIIEEPPSTSYSTSKRDGSSSKTSLANKHTPMDAKVLENVFHDQDIDD---DEPFPT 122

BLAST of Tan0011160 vs. NCBI nr
Match: XP_038884881.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 116.3 bits (290), Expect = 2.0e-22
Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MASR I KFEKYWSVIHGVLAIATVLDPRFKMRLI+FYFPQIYG  H+ VE++RVRD+C 
Sbjct: 196 MASRMIAKFEKYWSVIHGVLAIATVLDPRFKMRLIQFYFPQIYG-FHHTVEIKRVRDLCC 255

Query: 61  DLMKYYMSTSST 73
           DLMK+Y S S T
Sbjct: 256 DLMKFYSSNSRT 266

BLAST of Tan0011160 vs. NCBI nr
Match: TYK23151.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa])

HSP 1 Score: 106.7 bits (265), Expect = 1.6e-19
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0

Query: 1  MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
          MASR I+KFEKYWSVIH  LAIAT LDP+FKMRLIEFYFPQIY  +HYV E++RVR++C 
Sbjct: 1  MASRMISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIY-ESHYVAEIKRVRELCC 60

Query: 61 DLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLNTNTPI 99
          DLM +Y S S T  +   ST T    S     ++ T +
Sbjct: 61 DLMTFYSSKSRTIEEPQRSTSTPYSTSKRDGSSSKTSL 97

BLAST of Tan0011160 vs. NCBI nr
Match: XP_026435170.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Papaver somniferum])

HSP 1 Score: 90.9 bits (224), Expect = 8.9e-15
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MA   I KFE+YW VI+GV+A+A +LDPRFKM+LIEFYFPQIYG A   +E+ RVRD+C 
Sbjct: 461 MAYEMIEKFEEYWFVINGVMAVAIMLDPRFKMKLIEFYFPQIYGQAFSKIEIDRVRDLCV 520

Query: 61  DLMKYY 67
           DL   Y
Sbjct: 521 DLATEY 526

BLAST of Tan0011160 vs. NCBI nr
Match: TXG73027.1 (hypothetical protein EZV62_001606 [Acer yangbiense])

HSP 1 Score: 90.1 bits (222), Expect = 1.5e-14
Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MA + I  FEKYW VIHGV+A+AT+LDPR+KMRLIEFYFP I+G A+Y+  ++ +R +C 
Sbjct: 439 MAVKMIENFEKYWDVIHGVMAMATMLDPRYKMRLIEFYFPSIFG-ANYMTHLESIRKLCL 498

Query: 61  DLMKYY 67
           DL+K Y
Sbjct: 499 DLVKEY 503

BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A0A0K403 (DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25
Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 0

Query: 8   KFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCRDLMKYYM 67
           ++EKYWSVIHGVLAIATVLDPRFKMRLIEFYF QIYG +HY+VE++RVR++C DLMK Y 
Sbjct: 6   RYEKYWSVIHGVLAIATVLDPRFKMRLIEFYFRQIYG-SHYIVEIERVRELCCDLMKVYS 65

Query: 68  STSS-TEGDSSCSTITSRQVSSSSS---LNTNTPIDGKVLKTILQDRDPDDVVSNYRFPT 125
           S SS  E   S S  TS++  SSS     N +TP+D KVL+ +  D+D DD   +  FPT
Sbjct: 66  SKSSIIEEPPSTSYSTSKRDGSSSKTSLANKHTPMDAKVLENVFHDQDIDD---DEPFPT 122

BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A5D3DHK7 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001630 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.6e-20
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0

Query: 1  MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
          MASR I+KFEKYWSVIH  LAIAT LDP+FKMRLIEFYFPQIY  +HYV E++RVR++C 
Sbjct: 1  MASRMISKFEKYWSVIHSALAIATALDPKFKMRLIEFYFPQIY-ESHYVAEIKRVRELCC 60

Query: 61 DLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLNTNTPI 99
          DLM +Y S S T  +   ST T    S     ++ T +
Sbjct: 61 DLMTFYSSKSRTIEEPQRSTSTPYSTSKRDGSSSKTSL 97

BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A5C7IUL5 (BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 7.4e-15
Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MA + I  FEKYW VIHGV+A+AT+LDPR+KMRLIEFYFP I+G A+Y+  ++ +R +C 
Sbjct: 439 MAVKMIENFEKYWDVIHGVMAMATMLDPRYKMRLIEFYFPSIFG-ANYMTHLESIRKLCL 498

Query: 61  DLMKYY 67
           DL+K Y
Sbjct: 499 DLVKEY 503

BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A5C7HKE4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14
Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           +AS  I KFEKYW+VI+G++A+ATVLDPRFKM+++EFYFP IYG  +   EM++VR +C 
Sbjct: 294 IASNAIAKFEKYWNVINGMMAVATVLDPRFKMKVLEFYFPHIYGD-NSSFEMEKVRRLCY 353

Query: 61  DLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLN 94
            L+K Y   S T G   C  I S    SS S++
Sbjct: 354 GLVKEYQLNSKT-GKEPCDRIDSSCSPSSMSIS 384

BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A803PTU2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 8.2e-14
Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 1   MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCR 60
           MAS  + KFE+YW+ IHG+LAIATVLDPRFKM+LIE+YFP++Y    Y  E++R+R +C 
Sbjct: 295 MASNMMDKFEQYWTSIHGILAIATVLDPRFKMKLIEYYFPKLY-VGDYQNEVERIRMLCY 354

Query: 61  DLMKYYMSTSSTE 74
           DL+K Y      E
Sbjct: 355 DLVKEYKPNDGKE 366

BLAST of Tan0011160 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 47.0 bits (110), Expect = 1.4e-05
Identity = 41/136 (30.15%), Postives = 68/136 (50.00%), Query Frame = 0

Query: 8   KFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCRDLMKYYM 67
           K +KYW     VLA+A V+DPRFKM+L+EF F +I+G       ++ V D   +L   YM
Sbjct: 498 KVDKYWRDCSLVLAMAVVMDPRFKMKLVEFSFSKIFG-EDAGKNIKTVDDGIHELFTEYM 557

Query: 68  ------STSSTEGDSSCSTITSRQVSSSSSLNTNTPIDGKVLKTILQDRDPDDVV----- 127
                 +T+S  G +   +     +  ++  N  + +D  + +T+L      DV+     
Sbjct: 558 ALPSPQNTTSEGGKADGLSDFDTYIMETTGQNLKSELDQYLDETLLPRVQEFDVLDWWKQ 617

Query: 128 SNYRFPTKSLSKELRE 133
           +  ++PT  LSK  R+
Sbjct: 618 NKLKYPT--LSKMARD 630

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q0JMB21.3e-0847.46Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j... [more]
Q6AVI05.4e-0747.62Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
B9FJG32.1e-0646.03Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... [more]
P087707.9e-0636.44Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
P030107.9e-0636.44Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN44253.13.3e-2560.33hypothetical protein Csa_016011 [Cucumis sativus][more]
XP_038884881.12.0e-2279.17zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida][more]
TYK23151.11.6e-1958.16zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. mak... [more]
XP_026435170.18.9e-1563.64zinc finger BED domain-containing protein RICESLEEPER 2-like [Papaver somniferum... [more]
TXG73027.11.5e-1460.61hypothetical protein EZV62_001606 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
A0A0A0K4031.6e-2560.33DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=... [more]
A0A5D3DHK77.6e-2058.16Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. m... [more]
A0A5C7IUL57.4e-1560.61BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606... [more]
A0A5C7HKE42.8e-1451.61Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1[more]
A0A803PTU28.2e-1456.16Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G42170.11.4e-0530.15BED zinc finger ;hAT family dimerisation domain [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025525hAT-like transposase, RNase-H foldPFAMPF14372DUF4413coord: 1..66
e-value: 6.7E-16
score: 58.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..97
NoneNo IPR availablePANTHERPTHR23272:SF141ZINC FINGER BED DOMAIN-CONTAINING PROTEIN RICESLEEPER 2-LIKEcoord: 1..93
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 1..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0011160.1Tan0011160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009791 post-embryonic development
biological_process GO:0006412 translation
biological_process GO:0043039 tRNA aminoacylation
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046983 protein dimerization activity