Tan0011160 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAAGAACGATTACTAAGTTTGAAAAATATTGGAGTGTGATTCACGGTGTTCTGGCAATAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATTGAATTTTATTTTCCACAAATCTATGGACCTGCTCACTATGTTGTTGAAATGCAACGTGTTCGAGATATGTGTAGAGATTTAATGAAGTATTATATGTCAACTTCAAGTACAGAAGGAGACTCTTCATGTTCTACCATTACTTCAAGGCAAGTGAGTAGTTCTAGTTCTCTTAGTCAGAAGAAAGATCGATTTCTCAAGTTTGATGAGTTTATTAACAATGTTGCTAATGTTGATAATGCCAAATCAGAGTTAGATCTGTATTTAGAGGAAAGTCTTTTACCCAGATCTGATGACTTTGATATTTTGAGTTGGTGGAAGTTAAATGGGGTAAAGTACCCTATTTTGTATCAAATTGCCAAAGATATTTTAGTTGTTCATGTCATTAATGTTGCTTCAGAGTCTGCATTTAGTATTGGTGGTAGACACGTAGGTCCACATCGTTCTCAAATTCATTCTGCCTTACTAGAAGCTTTGATGTGTGCTCAGGATTGGCTCTGGGCTGAAGGTATGATTAATTTATTTTAAATAAATTGTTATTATCATCTAAAATGTTTTGTTATTTTTATCATCATTTAAGAATTGTTATGTGGACTTGGAATAGATACAAATACTCCAATAGATGGCAAAGTGTTGAAAACTATTCTCCAAGATCGAGATCCAGATGATGTAGTAAGTAATTGTAGAATTAGTTTGTGTCACTAAATAACTTTTTTAATTGTAGAATTTGTAATAACATTTTTCAATATTTGTTTTTCAGGAATAATGTGCTATAAATCCTAATGATTGAAGGATGGATACCTAAAGCTATGTTGTTTGTTGTACTGTGGTCGATTTCATTACTGAAACTAAGTGTAATATTTGAATTAAAGATTTCGTTGAAAACTATGTTTTTAACTTGTTGAAGACTATTTTTCTTTTCTTTTTTCAGATTGTAATGTTTAATTGTGTTTGAATTATTGTGGTTGAATGCTTTATTTTTAGTATAATGTTGGTTGAAATTTTAACTATATGTATTTTTGCTTATGGGTTGGTTTTTATTAATTAATTATATATATATATATATATTGGCATTCTATAATCTACTCTTTAAATATAAAGGTTGGTAATAGAAATCATCTATTTGAATGTATTAAAAAATAATATATTAATTTTTTTAAAAAAATCTATTATTTTAAAAAATTAAACAAATGGGGAAATTTCCCGCGGGGAATCCCCGCCCCGTCCCCTATGAAAATAAATGGTGAATTTTGCGGGGACGGGGAAGTTTTCCCGTCCCCGCCTCGCCCCGTGGACACCTCTACTTATATCGTTGGAGCTTCTAATCTGTAGGTTCATTAGGTCAACTCCCTAGCTCGTAAATGGTTATGAGATTGCTAGATCTTAATTAAAATTTGAAAATTTCAAATTCACTTTGGGAATTAATTTTTTGTATGAAAATACATTATAATATAAAGTTTTTATATTGATTAAAAACTTATTATATAAATTTAATTTTGGATATGATTCAAAGTTAAAGTTTGAGAGAATTAAATATTTGAAATAGTTTGAGTATTGTTTTAATGTGAATAAGATTCATGTTAAAAACTATAGATTAAATTTTAATGCACATAAGATGTACATTAAAACTATAGATCAAGGGAGAATGATTACTAAATGTGATTTAATCATAATAGCCTAAATTAATATATGATATTTAATTTATAAATTAATTAATTAGATAATTAATTAATTTGTAAGTTTAACTAACTTAATTAAATTTGATTTAATTAAATTAATTAAAACTATAAGTTATAATAGATATGCATTTAATATGATTTAAATGTTAATTAATCTGATTAAATGTTAACTAAATTAATTAAATTAAAATTAAGGGAACGTGTATTACGCACGTTCCCACTCTCTCACTAAGCCAACATTATCTCCCCCTTCCTCTATTGATAAAACAAATGGGAGTTGGGAGAGAGATGGTTGAACAACCGTCGTGAAAACAAGCTTTTTTTCGTTTTGGAAAGAAAATTCTTTCTTAAAAGTTTCCATAGTTTTTTAGATAGATTTCCCACAAAATCTCTATCAAAAGAACTCAGAGAATAA ATGGCTTCAAGAACGATTACTAAGTTTGAAAAATATTGGAGTGTGATTCACGGTGTTCTGGCAATAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATTGAATTTTATTTTCCACAAATCTATGGACCTGCTCACTATGTTGTTGAAATGCAACGTGTTCGAGATATGTGTAGAGATTTAATGAAGTATTATATGTCAACTTCAAGTACAGAAGGAGACTCTTCATGTTCTACCATTACTTCAAGGCAAGTGAGTAGTTCTAGTTCTCTTAATACAAATACTCCAATAGATGGCAAAGTGTTGAAAACTATTCTCCAAGATCGAGATCCAGATGATGTAGTAAGTAATTATAGATTTCCCACAAAATCTCTATCAAAAGAACTCAGAGAATAA ATGGCTTCAAGAACGATTACTAAGTTTGAAAAATATTGGAGTGTGATTCACGGTGTTCTGGCAATAGCTACAGTATTAGATCCTAGATTTAAGATGAGATTGATTGAATTTTATTTTCCACAAATCTATGGACCTGCTCACTATGTTGTTGAAATGCAACGTGTTCGAGATATGTGTAGAGATTTAATGAAGTATTATATGTCAACTTCAAGTACAGAAGGAGACTCTTCATGTTCTACCATTACTTCAAGGCAAGTGAGTAGTTCTAGTTCTCTTAATACAAATACTCCAATAGATGGCAAAGTGTTGAAAACTATTCTCCAAGATCGAGATCCAGATGATGTAGTAAGTAATTATAGATTTCCCACAAAATCTCTATCAAAAGAACTCAGAGAATAA MASRTITKFEKYWSVIHGVLAIATVLDPRFKMRLIEFYFPQIYGPAHYVVEMQRVRDMCRDLMKYYMSTSSTEGDSSCSTITSRQVSSSSSLNTNTPIDGKVLKTILQDRDPDDVVSNYRFPTKSLSKELRE Homology
BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-08 Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 5.4e-07 Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.1e-06 Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06 Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06 Identity = 43/118 (36.44%), Postives = 58/118 (49.15%), Query Frame = 0
BLAST of Tan0011160 vs. NCBI nr
Match: KGN44253.1 (hypothetical protein Csa_016011 [Cucumis sativus]) HSP 1 Score: 125.6 bits (314), Expect = 3.3e-25 Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 0
BLAST of Tan0011160 vs. NCBI nr
Match: XP_038884881.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 116.3 bits (290), Expect = 2.0e-22 Identity = 57/72 (79.17%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Tan0011160 vs. NCBI nr
Match: TYK23151.1 (zinc finger BED domain-containing protein DAYSLEEPER-like [Cucumis melo var. makuwa]) HSP 1 Score: 106.7 bits (265), Expect = 1.6e-19 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Tan0011160 vs. NCBI nr
Match: XP_026435170.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Papaver somniferum]) HSP 1 Score: 90.9 bits (224), Expect = 8.9e-15 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Tan0011160 vs. NCBI nr
Match: TXG73027.1 (hypothetical protein EZV62_001606 [Acer yangbiense]) HSP 1 Score: 90.1 bits (222), Expect = 1.5e-14 Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A0A0K403 (DUF4413 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G235230 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.6e-25 Identity = 73/121 (60.33%), Postives = 89/121 (73.55%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A5D3DHK7 (Zinc finger BED domain-containing protein DAYSLEEPER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001630 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 7.6e-20 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A5C7IUL5 (BED-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001606 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.4e-15 Identity = 40/66 (60.61%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A5C7HKE4 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_018687 PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.8e-14 Identity = 48/93 (51.61%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Tan0011160 vs. ExPASy TrEMBL
Match: A0A803PTU2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 8.2e-14 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Tan0011160 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 47.0 bits (110), Expect = 1.4e-05 Identity = 41/136 (30.15%), Postives = 68/136 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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