Tan0010962 (gene) Snake gourd v1

Overview


Name	Tan0010962
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	biogenesis of lysosome-related organelles complex 1 subunit 2
Location	LG04: 60614703 .. 60615856 (+)
RNA-Seq Expression	Tan0010962
Synteny	Tan0010962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTATCTAACGGTATTAGTTTTTCTCGTTCGCTGTTATCTCTACCCATCGCTCGAGATCCACTAACATTTGCGGTTCTATGTTCCGACGAGACGACGGCGAGTGATCACAATTCCAGAAAAAAAAGAGTTTCGCGGTTCTAATCTTATTTCATGGCCGAGAAAGAGGAACAATTGCCGAACAGGGACGAGCTTGCCGAGTCGCTCAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCGGACCTTCTTGTAATCTTCCAAAGCCCTAATTCTCTTACTTTCCATCTCGCTACCTCGCTAAAATTTTCGTTTGGGTCTCTGTGCTTGGTTTGATTCTGCTCTCTGCTCGTTGTTGGTTGTTTACTGTGTTGAATTATTCACTGTTTGGTTGAGCGTTTTCATTGAATACGTTTAAGGTTTGGAAAATTAATCGCCCATGTTTTAGGTTCAGAGGGGCGTTTTGACTATTGTTGGTTTTGTTTTTTAGAGCAATTGAAAGCTTGATTGTGATTGGCAAAACCATCAACTCATTTCCCCTGCTATATATCTGGCCTTTGAATGATCAATTTCGCTCTTTCACTATCTGCTTCTTCTTCTTTGTAATTCCCATGGCCCGTTTAGTTTTCATGAAACTTGAAAAATCGAGGAATCTGTGTTCTAATGTTTTATCAATTTCTTTTTATCTTTAACAATGACAAAACTCGATGTTTGCTTTAGTCAATGAATCTAAGAGGTGGGAATCAGCTTTCAAAGCCATATTTTTGTTATTTTGTCATATAGGGATCAAGTAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCTGAGGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGGCAAAGAGTGGTGGCTTTGATGAGTACATTAACCAGATTGAAAAAATAGAAAATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGCTGGAGTCTAAAGTGTTGTCCGTTTGTCAAAACACGCCTTCATGAATAAATTTCCTATTATGTGTTCTAAATTCAGAACGGTTCCTTCCAGAATATTTTTGCTTCAGTATTGTTCATATTGTCCAATCTTTTACAGTATCTCATTC

mRNA sequence

TTTTTATCTAACGGTATTAGTTTTTCTCGTTCGCTGTTATCTCTACCCATCGCTCGAGATCCACTAACATTTGCGGTTCTATGTTCCGACGAGACGACGGCGAGTGATCACAATTCCAGAAAAAAAAGAGTTTCGCGGTTCTAATCTTATTTCATGGCCGAGAAAGAGGAACAATTGCCGAACAGGGACGAGCTTGCCGAGTCGCTCAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCGGACCTTCTTGGATCAAGTAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCTGAGGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGGCAAAGAGTGGTGGCTTTGATGAGTACATTAACCAGATTGAAAAAATAGAAAATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGCTGGAGTCTAAAGTGTTGTCCGTTTGTCAAAACACGCCTTCATGAATAAATTTCCTATTATGTGTTCTAAATTCAGAACGGTTCCTTCCAGAATATTTTTGCTTCAGTATTGTTCATATTGTCCAATCTTTTACAGTATCTCATTC

Coding sequence (CDS)

ATGGCCGAGAAAGAGGAACAATTGCCGAACAGGGACGAGCTTGCCGAGTCGCTCAACGAATTCTTCACCAGCGTATCCGAAATGATCAAATCGGACCTTCTTGGATCAAGTAATCAGCTGGCACTTTTAGAGAAAATGAATCTCAGGGTGGCTGAGGAGTATAAAGGTTTTGGGGATGTGGCTTCTGGAATGAGGGTTTTTGTGGAGCAATTGAAGGCAAAGAGTGGTGGCTTTGATGAGTACATTAACCAGATTGAAAAAATAGAAAATCAGGTGACTGAATTTGAAGCTGTAATTTCAATGCTTGATAAGCATGTTTCCATGCTGGAGTCTAAAGTGTTGTCCGTTTGTCAAAACACGCCTTCATGA

Protein sequence

MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQNTPS

Homology

[Close]

BLAST of Tan0010962 vs. ExPASy Swiss-Prot
Match: F4K657 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis thaliana OX=3702 GN=BLOS2 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.0e-31
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 10  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVE 69
           +RD+LAESL   FTSVS M+KS+L G++N L LLEKMNLRVA EY   GDVA+G+RVF E
Sbjct: 4   SRDDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAE 63

Query: 70  QLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKV 114
           Q+K+KSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+LESK+
Sbjct: 64  QMKSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKI 107

[Close]

BLAST of Tan0010962 vs. ExPASy Swiss-Prot
Match: Q54Y67 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium discoideum OX=44689 GN=bloc1s2 PE=3 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 37/109 (33.94%), Postives = 61/109 (55.96%), Query Frame = 0


Query: 8   LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVF 67
           LP  ++L  S  E FT VS  IKS+L  + +   LL +MN   + +Y+   +V  G+ VF
Sbjct: 72  LPVTEDLQNSTKEMFTKVSSYIKSELATTVSDYNLLIQMNNITSSKYQDMTNVTKGLSVF 131

Query: 68  VEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSV 117
           +  LK K   F  Y ++I +++  VT+ E  + +LD++   LE KV ++
Sbjct: 132 MGDLKIKYEEFQPYFDKINELDKNVTDLEKTVQLLDEYTKRLEQKVKNI 180

[Close]

BLAST of Tan0010962 vs. ExPASy Swiss-Prot
Match: Q6QNY1 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens OX=9606 GN=BLOC1S2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-05
Identity = 30/109 (27.52%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 4   KEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 64  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESK 113
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   LE+K
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAK 135

[Close]

BLAST of Tan0010962 vs. ExPASy Swiss-Prot
Match: Q4R7C8 (Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicularis OX=9541 GN=BLOC1S2 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.7e-05
Identity = 30/109 (27.52%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 4   KEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADITELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 64  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESK 113
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   LE+K
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAK 135

[Close]

BLAST of Tan0010962 vs. ExPASy Swiss-Prot
Match: Q32WR5 (Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegicus OX=10116 GN=Bloc1s2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.0e-05
Identity = 30/109 (27.52%), Postives = 51/109 (46.79%), Query Frame = 0


Query: 4   KEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASG 63
           +E + P   ++ E   + F+ ++  +  +L  +S    LLE MN   + +Y    D+A  
Sbjct: 27  EEAKEPAEADINELCRDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAIN 86

Query: 64  MRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESK 113
           +   ++ L  K  G   Y++QI  IE QV   E     LD +   LE+K
Sbjct: 87  ISRNLKDLNQKYAGLQPYLDQINVIEEQVAALEQAAYKLDAYSKKLEAK 135

[Close]

BLAST of Tan0010962 vs. NCBI nr
Match: XP_038880795.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida])

HSP 1 Score: 220.3 bits (560), Expect = 9.0e-54
Identity = 115/121 (95.04%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA+KEEQ PNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLE+MNLRVAEEYKGFGDV
Sbjct: 1   MAQKEEQPPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLERMNLRVAEEYKGFGDV 60

Query: 61  ASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120
           ASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVISMLDKHVSMLESKVLSVCQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of Tan0010962 vs. NCBI nr
Match: XP_004137147.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus] >KGN53763.1 hypothetical protein Csa_014951 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.0e-54
Identity = 114/121 (94.21%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA+KEE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKGFGDV
Sbjct: 1   MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDV 60

Query: 61  ASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120
           ASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKHVSMLESKVLSVCQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of Tan0010962 vs. NCBI nr
Match: XP_008455567.1 (PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 112/121 (92.56%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA+KEE+LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MN RVAEEYKG+GDV
Sbjct: 1   MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNSRVAEEYKGYGDV 60

Query: 61  ASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120
           ASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVISMLDKHVSMLESKVLSVCQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of Tan0010962 vs. NCBI nr
Match: XP_022949044.1 (biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschata] >XP_022997803.1 biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAEKEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGD 60
           MAEKEE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGD 60

Query: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQN 120
           VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKH+SMLESKVLSVCQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]

BLAST of Tan0010962 vs. NCBI nr
Match: KAG6607085.1 (Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215.3 bits (547), Expect = 2.9e-52
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAEKEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGD 60
           MAEKEE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMN+RVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNIRVAEEYKGLGD 60

Query: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQN 120
           VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKH+SMLESKVLSVCQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]

BLAST of Tan0010962 vs. ExPASy TrEMBL
Match: A0A0A0KW18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123360 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54
Identity = 114/121 (94.21%), Postives = 120/121 (99.17%), Query Frame = 0


Query: 1   MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA+KEE+LPNRD+LAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MNLRVAEEYKGFGDV
Sbjct: 1   MAQKEERLPNRDDLAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNLRVAEEYKGFGDV 60

Query: 61  ASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120
           ASGMRVFVEQLK+KSGGFDEYINQIEKIE+QVTEFEAVISMLDKHVSMLESKVLSVCQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYINQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of Tan0010962 vs. ExPASy TrEMBL
Match: A0A6J1KEZ0 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111492648 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-53
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAEKEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGD 60
           MAEKEE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGD 60

Query: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQN 120
           VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKH+SMLESKVLSVCQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]

BLAST of Tan0010962 vs. ExPASy TrEMBL
Match: A0A6J1GBP4 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111452507 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-53
Identity = 116/121 (95.87%), Postives = 118/121 (97.52%), Query Frame = 0


Query: 1   MAEKEE-QLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGD 60
           MAEKEE QLPN DELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKG GD
Sbjct: 1   MAEKEEQQLPNSDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGLGD 60

Query: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQN 120
           VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKH+SMLESKVLSVCQN
Sbjct: 61  VASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHISMLESKVLSVCQN 120

[Close]

BLAST of Tan0010962 vs. ExPASy TrEMBL
Match: A0A1S3C0T0 (biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucumis melo OX=3656 GN=LOC103495715 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-53
Identity = 112/121 (92.56%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MA+KEE+LPNRDELAESLNEFFTSVSEMIKSDLLGSSNQL LLE+MN RVAEEYKG+GDV
Sbjct: 1   MAQKEERLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLELLERMNSRVAEEYKGYGDV 60

Query: 61  ASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120
           ASGMRVFVEQLK+KSGGFDEYI+QIEKIE+QVTEFEAVISMLDKHVSMLESKVLSVCQNT
Sbjct: 61  ASGMRVFVEQLKSKSGGFDEYIHQIEKIEHQVTEFEAVISMLDKHVSMLESKVLSVCQNT 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of Tan0010962 vs. ExPASy TrEMBL
Match: W9R9H2 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018142 PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.4e-38
Identity = 86/117 (73.50%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 1   MAEKEEQLPNRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDV 60
           MAEK +Q P+RDELAESLN+ FTSV  M+KS+L G++NQL LLEKMNLRV EEYKG+GDV
Sbjct: 1   MAEKTDQQPSRDELAESLNDLFTSVFAMVKSELQGTNNQLELLEKMNLRVGEEYKGYGDV 60

Query: 61  ASGMRVFVEQLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKVLSVC 118
           ASG+RVFVEQLK+KSG FDEY  +IE I+ QVTEFEAVISMLD++VS LESK+ S C
Sbjct: 61  ASGLRVFVEQLKSKSGSFDEYAQKIETIDQQVTEFEAVISMLDRYVSALESKLQSAC 117

[Close]

BLAST of Tan0010962 vs. TAIR 10
Match: AT5G49550.1 (Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1. )

HSP 1 Score: 137.5 bits (345), Expect = 7.2e-33
Identity = 68/104 (65.38%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 10  NRDELAESLNEFFTSVSEMIKSDLLGSSNQLALLEKMNLRVAEEYKGFGDVASGMRVFVE 69
           +RD+LAESL   FTSVS M+KS+L G++N L LLEKMNLRVA EY   GDVA+G+RVF E
Sbjct: 4   SRDDLAESLQNLFTSVSSMVKSELQGTNNHLDLLEKMNLRVASEYDDMGDVAAGLRVFAE 63

Query: 70  QLKAKSGGFDEYINQIEKIENQVTEFEAVISMLDKHVSMLESKV 114
           Q+K+KSGG DE++ Q++ IE QV+EFEAVIS+LD++VS+LESK+
Sbjct: 64  QMKSKSGGLDEFVGQMDAIEKQVSEFEAVISVLDRYVSVLESKI 107

The following BLAST results are available for this feature:

BLAST of Tan0010962 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K657	1.0e-31	65.38	Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Arabidopsis tha...	[more]
Q54Y67	7.5e-11	33.94	Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Dictyostelium d...	[more]
Q6QNY1	4.7e-05	27.52	Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Homo sapiens OX...	[more]
Q4R7C8	4.7e-05	27.52	Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Macaca fascicul...	[more]
Q32WR5	8.0e-05	27.52	Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegic...	[more]

BLAST of Tan0010962 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880795.1	9.0e-54	95.04	biogenesis of lysosome-related organelles complex 1 subunit 2 [Benincasa hispida...	[more]
XP_004137147.1	9.0e-54	94.21	biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumis sativus] ...	[more]
XP_008455567.1	1.7e-52	92.56	PREDICTED: biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucumi...	[more]
XP_022949044.1	1.7e-52	95.87	biogenesis of lysosome-related organelles complex 1 subunit 2 [Cucurbita moschat...	[more]
KAG6607085.1	2.9e-52	95.04	Biogenesis of lysosome-related organelles complex 1 subunit 2, partial [Cucurbit...	[more]

BLAST of Tan0010962 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW18	4.4e-54	94.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123360 PE=3 SV=1	[more]
A0A6J1KEZ0	8.2e-53	95.87	biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita maxim...	[more]
A0A6J1GBP4	8.2e-53	95.87	biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucurbita mosch...	[more]
A0A1S3C0T0	8.2e-53	92.56	biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Cucumis melo OX...	[more]
W9R9H2	4.4e-38	73.50	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018142 PE=3 SV=1	[more]

BLAST of Tan0010962 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49550.1	7.2e-33	65.38	Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction wi...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 78..98
None	No IPR available	PANTHER	PTHR47882	BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2	coord: 6..121
IPR019269	Biogenesis of lysosome-related organelles complex-1, subunit 2	PFAM	PF10046	BLOC1_2	coord: 20..113 e-value: 1.7E-26 score: 92.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010962.1	Tan0010962.1	mRNA