Tan0010958 (gene) Snake gourd v1

Overview


Name	Tan0010958
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein VAC14 homolog
Location	LG06: 17974652 .. 17977434 (+)
RNA-Seq Expression	Tan0010958
Synteny	Tan0010958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCACTTCACCAATTGCCCCAAGGTTGGTGGAATTTAGAGTTTTTTGTTGTGTTTCTAATTGTATTCCAAGTCCAATGAGTGAATGTTCGGTGTTTGGATCCCAAATCTGACCATTTTTTGTGTTATTGTCGAATTTTGAGTTGTTGTTTTCATTTCTAGGGGTTTGATTGTTTGTAATCTTTCAACGGTTGCATTTTTCTTGTAGGTTGAGAGATTTGTGAAGCAACTTGCGTCGGCTGGAGATCACGAGAAGATTACAGCGGTTATTAATTTGGTGACGAACGAATTCACTATGTCGCCTCAAGCGAATCATAGAAAGGTATGGGATGAATGCGAAAATGAATGTTTTGATGGTTCAGGTTTTCCTGTGAGAGTTTGGATGCTCGGTGAAATCTTGATTTTCTTTATGTTTCGAATTTGCATGATTTTAAACATTCAATTTCATTTTGTAGGGAGGATTGATTGGACTTTCTGCTGCAACTGTTGGCTTGACTTCTGATGCGTCTCAACATCTTGAAGGTAGTATATTCTTAGGTTGTTTCGTAATTGAGTTTTATAGTTTAGTTCATCACTGATTTACAAAGGGTTATTGTCGTTATTTCCTAAAGATAAGTACATAGTCTACTTAAAATGTACTTGAAGAGTTTAGTCGTTAGAAGTTGGATATGTTATCCTATCTCTGCAGCTTGTAGCTTAAAACTATTAAATTGTAAAGATTTTGGCTACTCCGAATAACATTATGAGACTTGATTTGTTTCTCCTCTCTTTTTAAGTAGTGTAACTTTACGGGCTTTTAATGATTGTTGATGTTGATGTATGTTTGCTTAAAATGGGTGTATGAAATTATCAAGAAAACACTTCTAAATTGTGCAAGTATACACAATCTAAGCAGCAAGTGATAAGTAAATTTAATCGTCTTCTCAGGGATTAGTTGTAGAAATTACACAGAGTTGAGTTGAATTTAATGAGTAAAGGGTAACCAACATAAATGAGATGAATATTGAAATTAGAAATTAGAAGTAACAATTGAAATGCTAAAGTAATGCAGAAAATGTTTAGTAAAAGTAAGAGCAACAACACAAGTTTAACCAAAACAGTAGAAAGGGGATAGGATTAGGGATGAAATTATGCTTCAGCAATATTAATGCTAGAGCTCAAAATCGCACTGCAGCTCAAAACAAAGACAGAGAGCTCATAACAAAGATAACTCACGGAATCTTCCCATTTCCTCATGATTTAGGCACTTAATTTCCATTAAACACCTCAATTTTAGCTCCTAATCATAACAACTAGGTGAGTGACTATTCCTAGACTCCTCAATCACCTGAGAGAAGTAAATCTCTTAATCAGAACTAGTGTTAAGCCTTGAAATCGGTTTATTCTTCCCTTTCCCAAGTTGGAACAAACAATGCTAAAATGAGATGGCCAACCAAATTCTAGCTAAACAGTAAATTCACAAGGCATAAGAGTGAAATAGCAGCAAATTACTCTTTCATTAAAGTTGCATATACATAAAGTCTCCTAATCCTCACCCCAAAGGTGATTAGTTCATGGTGATAAGAAAAGACAACAATAAAACAATAAACCTAGTGTTAAACATGCTTAAAATGGTCTTAGTTACAATGTAAAAGAGTAAAGAGCAAGGGGAATGAAAGAATGAACAGATGGGTGAAGTTCCCAAGCCTTTCTCGGTCCACCCCAGCCTCTTTTCAGAAGGAGAAAGCTTCCCCAATTCGGCTTGCTAGAATTTCGCCTCTTGTCTTCTTCCCAATCGGGTTCTTCCTTTTTTCTTCTTGCCCCCTCTCCTTTTTGCCCTAAAAATGGCTAAGAAAGCCTTTATATCAGACCCATATGGAAATGGGGGCTGAATAGACAAGGGAAAACGGTCTAGCGGCTGCCCATTGGTTCTTAGCGGCTGATGTGGCGGTTTTTGTCCAACTCAATTAATGAGATCTCTCCCACGTGCGTATTCTGCGAACTGGTACCAGAATTTTTGCTACAGCAATCTTGATCATTCAAAGAATTGTATGCAATCACAAAGAAATTTCTCGAAGCAGACCTTCAACACTTCATAACATCTATCTTCCCAAAAACTCCTGAAAACATGGCCAAAATGACAAAATTCAACAATGAAAAGTACTTCAATGGCTTTAAGGTACTTCAAAAGTAATTTGTAAATATTAACACACAAAAGTACCTAATCAAGGAGTTAAAATAATCAATAAATCTCAAAATACCAAGGAATAATCACAATAAAAGCTCAATCTTAGCTCTCATTCTAAGAGCTAACAATGTATAACTTGTATCAGTACTATATAAAGAATACATATCTGTTATGTTTTCTTCCATTTTGGTGATGTTATTATGTTATTATATTATAGTTTTTCCTTCTAACATGATAAACTTTCTAGCAAATTGTACCTCTCGTGCTCAATTCTTTTTCTGATCAAGATAGCAGAGTATGTTATTATACATGTGAAGCTCTATACAACATTGCAAAGGCGAGAGGAATTGTCAGAGATCTTAAAGTACTTTTGGGACTAAGCTGAATATGTACTTCTATGGTTGCAGGTTGTTAGAGGCAATTTTATAGTTTTCTTTAACCAGATATTTGATGCCTTATGTAAACTTTCAGCTGATTCAGATGCTAATGTACAAAGTGTTGCTCATCTATTAGATCGACTTGTGAAGGTACTCACTTACCCGTCAATCCCCTACCCTCAACAAGTTTTACAGGAAAAAAGAAAAGACAAATCCCATGTTTCAAACATTCTCTGA

mRNA sequence

ATGTTTCACTTCACCAATTGCCCCAAGGTTGAGAGATTTGTGAAGCAACTTGCGTCGGCTGGAGATCACGAGAAGATTACAGCGGTTATTAATTTGGTGACGAACGAATTCACTATGTCGCCTCAAGCGAATCATAGAAAGGGAGGATTGATTGGACTTTCTGCTGCAACTGTTGGCTTGACTTCTGATGCGTCTCAACATCTTGAAGCTGATTCAGATGCTAATGTACAAAGTGTTGCTCATCTATTAGATCGACTTGTGAAGGTACTCACTTACCCGTCAATCCCCTACCCTCAACAAGTTTTACAGGAAAAAAGAAAAGACAAATCCCATGTTTCAAACATTCTCTGA

Coding sequence (CDS)

ATGTTTCACTTCACCAATTGCCCCAAGGTTGAGAGATTTGTGAAGCAACTTGCGTCGGCTGGAGATCACGAGAAGATTACAGCGGTTATTAATTTGGTGACGAACGAATTCACTATGTCGCCTCAAGCGAATCATAGAAAGGGAGGATTGATTGGACTTTCTGCTGCAACTGTTGGCTTGACTTCTGATGCGTCTCAACATCTTGAAGCTGATTCAGATGCTAATGTACAAAGTGTTGCTCATCTATTAGATCGACTTGTGAAGGTACTCACTTACCCGTCAATCCCCTACCCTCAACAAGTTTTACAGGAAAAAAGAAAAGACAAATCCCATGTTTCAAACATTCTCTGA

Protein sequence

MFHFTNCPKVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHLEADSDANVQSVAHLLDRLVKVLTYPSIPYPQQVLQEKRKDKSHVSNIL

Homology

[Close]

BLAST of Tan0010958 vs. ExPASy Swiss-Prot
Match: Q9ZU97 (Protein VAC14 homolog OS=Arabidopsis thaliana OX=3702 GN=VAC14 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.5e-18
Identity = 59/157 (37.58%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E  VK L S+GDH+KI+ VI ++  EF  SPQANHRKGGLIGL+A TVGL+++A+Q+L
Sbjct: 30  ELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIGLAAVTVGLSTEAAQYL 89

Query: 69  E---------------------------------------------------ADSDANVQ 115
           E                                                   ADSDANVQ
Sbjct: 90  EQIVPPVINSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKIFDALCKLSADSDANVQ 149

[Close]

BLAST of Tan0010958 vs. ExPASy Swiss-Prot
Match: Q68F38 (Protein VAC14 homolog OS=Xenopus laevis OX=8355 GN=vac14 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 30/100 (30.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E+ V++  S  +  +I  VI +++ EF +S   + RKGGLIGL+A ++ L  D+ Q+L
Sbjct: 32  EIEKLVREFVSQNNTAQIKHVIQILSQEFALSQHPHSRKGGLIGLAACSIALGKDSGQYL 91

Query: 69  EA----------DSDANVQSVA-HLLDRLVKVLTYPSIPY 98
                       D+D+ ++  A   L  +VKV     +P+
Sbjct: 92  RELIEPVLTCFNDADSRLRYYACEALYNIVKVARGSVLPH 131

[Close]

BLAST of Tan0010958 vs. ExPASy Swiss-Prot
Match: Q66L58 (Protein VAC14 homolog OS=Danio rerio OX=7955 GN=vac14 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.9e-05
Identity = 29/100 (29.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E+ V++  +  +  +I  VI ++  EF +S   + RKGGLIGL+A ++ L  D+  +L
Sbjct: 32  EIEKLVREFVAQNNSAQIRHVIQILATEFALSQHPHSRKGGLIGLAACSIALGKDSGLYL 91

Query: 69  EA----------DSDANVQSVA-HLLDRLVKVLTYPSIPY 98
           +           DSD+ ++  A   L  +VKV     +P+
Sbjct: 92  KELIDPVLTCFNDSDSRLRYYACEALYNIVKVARGAVLPH 131

[Close]

BLAST of Tan0010958 vs. ExPASy Swiss-Prot
Match: Q5ZIW5 (Protein VAC14 homolog OS=Gallus gallus OX=9031 GN=VAC14 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.9e-04
Identity = 27/100 (27.00%), Postives = 54/100 (54.00%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E+ V++  +  +  ++  VI +++ EF +S   + RKGGLIGL+A ++ L  D+  +L
Sbjct: 32  EIEKLVREFVAQNNTSQVKHVILILSQEFALSQHPHSRKGGLIGLAACSIALGKDSGLYL 91

Query: 69  EA----------DSDANVQSVA-HLLDRLVKVLTYPSIPY 98
           +           D+D+ ++  A   L  +VKV     +P+
Sbjct: 92  KELIEPVLTCFNDADSRLRYYACEALYNIVKVARGSVLPH 131

[Close]

BLAST of Tan0010958 vs. ExPASy Swiss-Prot
Match: A2VE70 (Protein VAC14 homolog OS=Bos taurus OX=9913 GN=VAC14 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 3.8e-04
Identity = 28/100 (28.00%), Postives = 53/100 (53.00%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E+ V++  +  +  +I  VI  ++ EF +S   + RKGGLIGL+A ++ L  D+  +L
Sbjct: 32  EIEKLVREFVAQNNTVQIKHVIQTLSQEFALSQHPHSRKGGLIGLAACSIALGKDSGLYL 91

Query: 69  EA----------DSDANVQSVA-HLLDRLVKVLTYPSIPY 98
           +           D+D+ ++  A   L  +VKV     +P+
Sbjct: 92  KELIEPVLTCFNDADSRLRYYACEALYNIVKVARGAVLPH 131

[Close]

BLAST of Tan0010958 vs. NCBI nr
Match: OMO93979.1 (Armadillo-like helical [Corchorus olitorius])

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 68/101 (67.33%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLAS+GDHEKI+AVINL+T EFT SPQANHRKGGLIGL+AATVGLTS+A+QHL
Sbjct: 30  EVEGIVKQLASSGDHEKISAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHL 89

Query: 69  E---------------------ADSDANVQSVAHLLDRLVK 89
           E                     ADSDANVQS AHLLDRLVK
Sbjct: 90  EVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVK 130

[Close]

BLAST of Tan0010958 vs. NCBI nr
Match: VAI08188.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-24
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E  VKQL++AG+H+KI AVI L+TN+FT SPQANHRKGGLIGL+A TVGLTS+A+QHL
Sbjct: 31  EIEGIVKQLSTAGEHDKIAAVIGLLTNDFTYSPQANHRKGGLIGLAAVTVGLTSEAAQHL 90

Query: 69  EADSDANVQSVAHLLDRLVKVLTYPSIPYPQQVLQEKRKDKSHVSN 115
           E DSDANVQS AHLLDRLVK +   S  +  +      +++ +V N
Sbjct: 91  E-DSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLN 135

[Close]

BLAST of Tan0010958 vs. NCBI nr
Match: XP_022725365.1 (protein VAC14 homolog isoform X2 [Durio zibethinus])

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-24
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLAS+GDHEKITAVINL+T EFT SPQANHRKGGLIGL+AATVGLTS+A+QHL
Sbjct: 30  EVEGIVKQLASSGDHEKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHL 89

Query: 69  EA---------------------DSDANVQSVAHLLDRLVK 89
           E                      D+DANVQS AHLLDRLVK
Sbjct: 90  EVVRGEFIIFFNQIFDALCKLSFDADANVQSAAHLLDRLVK 130

[Close]

BLAST of Tan0010958 vs. NCBI nr
Match: KAG5605406.1 (hypothetical protein H5410_026898 [Solanum commersonii])

HSP 1 Score: 121.3 bits (303), Expect = 5.4e-24
Identity = 69/127 (54.33%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E  VKQLA AGDH+KITAVINL+TNE+T SPQANHRKGGLIGL+A TVGLTS+A+QHL
Sbjct: 40  ELEGIVKQLAVAGDHDKITAVINLLTNEYTYSPQANHRKGGLIGLAAVTVGLTSEAAQHL 99

Query: 69  E---------------------ADSDANVQSVAHLLDRLVKVLTYPSIPYPQQVLQEKRK 115
           E                     ADSDANVQS AHLLDRLVK +   S  +  +      +
Sbjct: 100 EVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTDSDQFSIEEFIPLLR 159

[Close]

BLAST of Tan0010958 vs. NCBI nr
Match: XP_023537238.1 (protein VAC14 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.6 bits (301), Expect = 9.2e-24
Identity = 76/157 (48.41%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLASAGDHE+ITAVINL+TNEFTMSPQANHRKGGLIGL+AATVGLTSDASQHL
Sbjct: 30  EVEGVVKQLASAGDHERITAVINLLTNEFTMSPQANHRKGGLIGLAAATVGLTSDASQHL 89

Query: 69  E---------------------------------------------------ADSDANVQ 115
           E                                                   ADSDANVQ
Sbjct: 90  EQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQ 149

[Close]

BLAST of Tan0010958 vs. ExPASy TrEMBL
Match: A0A0A0KTT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G626820 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27
Identity = 76/123 (61.79%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLASAGDHEKITAVINL+TN+FTMSPQANHRKGGLIGL+AATVGL+SDASQHL
Sbjct: 30  EVEGIVKQLASAGDHEKITAVINLLTNDFTMSPQANHRKGGLIGLAAATVGLSSDASQHL 89

Query: 69  E---------------------------------------ADSDANVQSVAHLLDRLVKV 93
           E                                       ADSDANVQS AHLLDRLVKV
Sbjct: 90  EQIVPPVLNSFSDQDSRVRYYACEALYNIAKIFDALCKLSADSDANVQSAAHLLDRLVKV 149

[Close]

BLAST of Tan0010958 vs. ExPASy TrEMBL
Match: A0A1R3JGM7 (Armadillo-like helical OS=Corchorus olitorius OX=93759 GN=COLO4_16587 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.3e-25
Identity = 68/101 (67.33%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLAS+GDHEKI+AVINL+T EFT SPQANHRKGGLIGL+AATVGLTS+A+QHL
Sbjct: 30  EVEGIVKQLASSGDHEKISAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHL 89

Query: 69  E---------------------ADSDANVQSVAHLLDRLVK 89
           E                     ADSDANVQS AHLLDRLVK
Sbjct: 90  EVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVK 130

[Close]

BLAST of Tan0010958 vs. ExPASy TrEMBL
Match: A0A446SAR2 (Vac14_Fig4_bd domain-containing protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_4Bv1G145440 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E  VKQL++AG+H+KI AVI L+TN+FT SPQANHRKGGLIGL+A TVGLTS+A+QHL
Sbjct: 31  EIEGIVKQLSTAGEHDKIAAVIGLLTNDFTYSPQANHRKGGLIGLAAVTVGLTSEAAQHL 90

Query: 69  EADSDANVQSVAHLLDRLVKVLTYPSIPYPQQVLQEKRKDKSHVSN 115
           E DSDANVQS AHLLDRLVK +   S  +  +      +++ +V N
Sbjct: 91  E-DSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLN 135

[Close]

BLAST of Tan0010958 vs. ExPASy TrEMBL
Match: A0A6P5XAD0 (protein VAC14 homolog isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111281870 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 67/101 (66.34%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLAS+GDHEKITAVINL+T EFT SPQANHRKGGLIGL+AATVGLTS+A+QHL
Sbjct: 30  EVEGIVKQLASSGDHEKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHL 89

Query: 69  EA---------------------DSDANVQSVAHLLDRLVK 89
           E                      D+DANVQS AHLLDRLVK
Sbjct: 90  EVVRGEFIIFFNQIFDALCKLSFDADANVQSAAHLLDRLVK 130

[Close]

BLAST of Tan0010958 vs. ExPASy TrEMBL
Match: A0A6J1JY05 (protein VAC14 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490779 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.5e-24
Identity = 76/157 (48.41%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           +VE  VKQLASAGDHE+ITAVINL+TNEFTMSPQANHRKGGLIGL+AATVGLTSDASQHL
Sbjct: 30  EVEGVVKQLASAGDHERITAVINLLTNEFTMSPQANHRKGGLIGLAAATVGLTSDASQHL 89

Query: 69  E---------------------------------------------------ADSDANVQ 115
           E                                                   ADSDANVQ
Sbjct: 90  EQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQ 149

[Close]

BLAST of Tan0010958 vs. TAIR 10
Match: AT2G01690.1 (ARM repeat superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-19
Identity = 59/157 (37.58%), Postives = 78/157 (49.68%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E  VK L S+GDH+KI+ VI ++  EF  SPQANHRKGGLIGL+A TVGL+++A+Q+L
Sbjct: 30  ELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIGLAAVTVGLSTEAAQYL 89

Query: 69  E---------------------------------------------------ADSDANVQ 115
           E                                                   ADSDANVQ
Sbjct: 90  EQIVPPVINSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKIFDALCKLSADSDANVQ 149

[Close]

BLAST of Tan0010958 vs. TAIR 10
Match: AT2G01690.2 (ARM repeat superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 5.6e-19
Identity = 55/131 (41.98%), Postives = 68/131 (51.91%), Query Frame = 0


Query: 9   KVERFVKQLASAGDHEKITAVINLVTNEFTMSPQANHRKGGLIGLSAATVGLTSDASQHL 68
           ++E  VK L S+GDH+KI+ VI ++  EF  SPQANHRKGGLIGL+A TVGL+++A+Q+L
Sbjct: 30  ELENIVKNLTSSGDHDKISKVIEMLIKEFAKSPQANHRKGGLIGLAAVTVGLSTEAAQYL 89

Query: 69  E---------------------------------------------------ADSDANVQ 89
           E                                                   ADSDANVQ
Sbjct: 90  EQIVPPVINSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNKIFDALCKLSADSDANVQ 149

The following BLAST results are available for this feature:

BLAST of Tan0010958 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU97	3.5e-18	37.58	Protein VAC14 homolog OS=Arabidopsis thaliana OX=3702 GN=VAC14 PE=1 SV=2	[more]
Q68F38	1.2e-05	30.00	Protein VAC14 homolog OS=Xenopus laevis OX=8355 GN=vac14 PE=2 SV=1	[more]
Q66L58	5.9e-05	29.00	Protein VAC14 homolog OS=Danio rerio OX=7955 GN=vac14 PE=2 SV=1	[more]
Q5ZIW5	2.9e-04	27.00	Protein VAC14 homolog OS=Gallus gallus OX=9031 GN=VAC14 PE=2 SV=1	[more]
A2VE70	3.8e-04	28.00	Protein VAC14 homolog OS=Bos taurus OX=9913 GN=VAC14 PE=2 SV=1	[more]

BLAST of Tan0010958 vs. NCBI nr


Match Name	E-value	Identity	Description
OMO93979.1	1.1e-24	67.33	Armadillo-like helical [Corchorus olitorius]	[more]
VAI08188.1	2.4e-24	60.38	unnamed protein product [Triticum turgidum subsp. durum]	[more]
XP_022725365.1	2.4e-24	66.34	protein VAC14 homolog isoform X2 [Durio zibethinus]	[more]
KAG5605406.1	5.4e-24	54.33	hypothetical protein H5410_026898 [Solanum commersonii]	[more]
XP_023537238.1	9.2e-24	48.41	protein VAC14 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0010958 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTT5	1.9e-27	61.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G626820 PE=4 SV=1	[more]
A0A1R3JGM7	5.3e-25	67.33	Armadillo-like helical OS=Corchorus olitorius OX=93759 GN=COLO4_16587 PE=4 SV=1	[more]
A0A446SAR2	1.2e-24	60.38	Vac14_Fig4_bd domain-containing protein OS=Triticum turgidum subsp. durum OX=456...	[more]
A0A6P5XAD0	1.2e-24	66.34	protein VAC14 homolog isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111281870 PE...	[more]
A0A6J1JY05	4.5e-24	48.41	protein VAC14 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490779 PE=3 SV=1	[more]

BLAST of Tan0010958 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01690.1	2.5e-19	37.58	ARM repeat superfamily protein	[more]
AT2G01690.2	5.6e-19	41.98	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026825	Vacuole morphology and inheritance protein 14	PANTHER	PTHR16023	TAX1 BINDING PROTEIN-RELATED	coord: 63..91
IPR026825	Vacuole morphology and inheritance protein 14	PANTHER	PTHR16023	TAX1 BINDING PROTEIN-RELATED	coord: 9..69
None	No IPR available	PANTHER	PTHR16023:SF3	BNAC09G20820D PROTEIN	coord: 9..69
None	No IPR available	PANTHER	PTHR16023:SF3	BNAC09G20820D PROTEIN	coord: 63..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010958.1	Tan0010958.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
cellular_component	GO:0070772	PAS complex