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Tan0010938 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCAAAGAAAGTTGCATCAAACATTGTTGCTGCAAGTAACACCTACATGTGTCTGATAACTCGCAGTCGTTCCAAAGGGGTTGAGATAAGTAATGATCGAACTGCTGATGTAATGACAAGCAACATCATCAAACTACTGGATGAAACTTCCAAAGGCAAGATTGTCGTCAAAGATAACCCCCTGTTTGACCAATCAACTCTTGCTCCTAATCAACTGAGGGAGACAACAAATCAGGATGTAATGTTAGTAATGATGGCTGATGTGGACCCTTACGAAATAATGGCAGAGATGGAAAGAAAGATCAATCTCCTGATGAAGGTAGTAGAAGAAAGAGATCTCGAAATCGCCTAG ATGGCATCAAAGAAAGTTGCATCAAACATTGTTGCTGCAAGTAACACCTACATGTGTCTGATAACTCGCAGTCGTTCCAAAGGGGTTGAGATAAGTAATGATCGAACTGCTGATGTAATGACAAGCAACATCATCAAACTACTGGATGAAACTTCCAAAGGCAAGATTGTCGTCAAAGATAACCCCCTGTTTGACCAATCAACTCTTGCTCCTAATCAACTGAGGGAGACAACAAATCAGGATGTAATGTTAGTAATGATGGCTGATGTGGACCCTTACGAAATAATGGCAGAGATGGAAAGAAAGATCAATCTCCTGATGAAGGTAGTAGAAGAAAGAGATCTCGAAATCGCCTAG ATGGCATCAAAGAAAGTTGCATCAAACATTGTTGCTGCAAGTAACACCTACATGTGTCTGATAACTCGCAGTCGTTCCAAAGGGGTTGAGATAAGTAATGATCGAACTGCTGATGTAATGACAAGCAACATCATCAAACTACTGGATGAAACTTCCAAAGGCAAGATTGTCGTCAAAGATAACCCCCTGTTTGACCAATCAACTCTTGCTCCTAATCAACTGAGGGAGACAACAAATCAGGATGTAATGTTAGTAATGATGGCTGATGTGGACCCTTACGAAATAATGGCAGAGATGGAAAGAAAGATCAATCTCCTGATGAAGGTAGTAGAAGAAAGAGATCTCGAAATCGCCTAG MASKKVASNIVAASNTYMCLITRSRSKGVEISNDRTADVMTSNIIKLLDETSKGKIVVKDNPLFDQSTLAPNQLRETTNQDVMLVMMADVDPYEIMAEMERKINLLMKVVEERDLEIA Homology
BLAST of Tan0010938 vs. NCBI nr
Match: KAA0061113.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK03782.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19 Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of Tan0010938 vs. NCBI nr
Match: KAA0054593.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27557.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 103.2 bits (256), Expect = 1.6e-18 Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Tan0010938 vs. NCBI nr
Match: KAA0066590.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 98.6 bits (244), Expect = 3.8e-17 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 0
BLAST of Tan0010938 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 6.5e-17 Identity = 63/118 (53.39%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of Tan0010938 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 6.5e-17 Identity = 63/118 (53.39%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of Tan0010938 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.2e-20 Identity = 65/117 (55.56%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of Tan0010938 vs. ExPASy TrEMBL
Match: A0A5A7UF60 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00260 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 7.5e-19 Identity = 64/117 (54.70%), Postives = 80/117 (68.38%), Query Frame = 0
BLAST of Tan0010938 vs. ExPASy TrEMBL
Match: A0A5A7VHE3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001650 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.9e-17 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 0
BLAST of Tan0010938 vs. ExPASy TrEMBL
Match: A0A5A7TIU8 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G003670 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 3.2e-17 Identity = 60/117 (51.28%), Postives = 77/117 (65.81%), Query Frame = 0
BLAST of Tan0010938 vs. ExPASy TrEMBL
Match: A0A5A7VCU1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00120 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 5.4e-17 Identity = 61/117 (52.14%), Postives = 78/117 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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