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Tan0010842 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGAATCTCCGAAAGGTCTAAAACACAGACACGTCTTGATCGAGAAAATTGTTTCTCCTTCCAAAACCTCCGCTGGGCATTCTTCTCCCCGAGAGTTCCACCAAGGTATTTTCAACGTAGCATTCATTTTCTCTATAAAGTTCATTTCAATTTTCCGTTTCTTTTCTTTGATTTGATTTGTGTATGCTATTGATCGGCATTTGCTTCTGTTGTTGAACTCCGGCAAGGTCGTTCCGGTCGGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCTGGTGAAGCTTGGAGAGAAAGAGTATGCTTCTAAACAGTTTTAGCTTCCTTTTCTTGTTCTATTATCAGAAATGATCGTCTGTCATATAATTCGTCCTGCACTTTTTGTGCTTATTATATTTGCATCTTTAGTTCATTAACGTAATCTCATTAATCATGTTTGTATGAAATTAGTCTTTGAGGCCCCATCTCCAATTCTAAAATGAATTTTAATTCTTGTATGAATGATTAATACAAAAAGAGTTATGAGCTAGGACTTGTGGTGCTAATACTGAATATTAGACACTCCGAGAAAGAAAAAGAAAAACAAAGTTGATTCAAAATGGAATCTAAATTAAATTGGACAGGAAGATTTACGGCTAAGAGTGAATTTGAAATGAATTTTAGAAGAATTTAGAGTTAGTGTATTAACATCTTTATATTTGGTAGATAATCGAAAAAGTATTCTAAAAACTTTAAGAGCATAAAAAATCATAGGGACTCATTCTAACTTTTAAAACTATAGAGATTAAATTCTAACTTTTTCAAAATCATTCGGGGACAAAATTTGTAATTTAACTAAACACTTAAAAAGGTACTTTCCAGAGAAGTACTTTATTACTGTTCCTTCCCGAAACTTTTTGTTGAATGTTTCTCAAAAATCATCTCAGATCAAGACTAAAATAGGATTGAAATATTATTTCCTCTATTCATTTTTATAATTTTGGTTTGGATTTCTGTGGTGGGGTTTATCTGCAGGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACAATTGATTAATTGA ATGGAAGGAATCTCCGAAAGGTCTAAAACACAGACACGTCTTGATCGAGAAAATTGTTTCTCCTTCCAAAACCTCCGCTGGGCATTCTTCTCCCCGAGAGTTCCACCAAGGTATTTTCAACGTAGCATTCATTTTCTCTATAAAGTCGTTCCGGTCGGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCTGGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACAATTGATTAATTGA ATGGAAGGAATCTCCGAAAGGTCTAAAACACAGACACGTCTTGATCGAGAAAATTGTTTCTCCTTCCAAAACCTCCGCTGGGCATTCTTCTCCCCGAGAGTTCCACCAAGGTATTTTCAACGTAGCATTCATTTTCTCTATAAAGTCGTTCCGGTCGGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCTGGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACAATTGATTAATTGA MEGISERSKTQTRLDRENCFSFQNLRWAFFSPRVPPRYFQRSIHFLYKVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTLQLIN Homology
BLAST of Tan0010842 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.5e-14 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 5.5e-14 Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-07 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy Swiss-Prot
Match: P61603 (10 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 3.8e-07 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy Swiss-Prot
Match: P61604 (10 kDa heat shock protein, mitochondrial OS=Homo sapiens OX=9606 GN=HSPE1 PE=1 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 3.8e-07 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
BLAST of Tan0010842 vs. NCBI nr
Match: KAG7558392.1 (GroES-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]) HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. NCBI nr
Match: CAE6062116.1 (unnamed protein product [Arabidopsis arenosa]) HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. NCBI nr
Match: KAG7563208.1 (GroES chaperonin family [Arabidopsis suecica]) HSP 1 Score: 80.5 bits (197), Expect = 8.5e-12 Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. NCBI nr
Match: XP_002282838.1 (PREDICTED: 10 kDa chaperonin, mitochondrial [Vitis vinifera] >CBI32793.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11 Identity = 35/42 (83.33%), Postives = 41/42 (97.62%), Query Frame = 0
BLAST of Tan0010842 vs. NCBI nr
Match: CAF2108881.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy TrEMBL
Match: M4DJJ9 (Uncharacterized protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy TrEMBL
Match: A0A3P6FDZ7 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC5T30049H PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy TrEMBL
Match: A0A3P6G9U0 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLC8T49323H PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy TrEMBL
Match: A0A5N6LRM1 (Uncharacterized protein OS=Mikania micrantha OX=192012 GN=E3N88_37588 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0
BLAST of Tan0010842 vs. ExPASy TrEMBL
Match: D7TQS3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0040g01150 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 5.4e-12 Identity = 35/42 (83.33%), Postives = 41/42 (97.62%), Query Frame = 0
BLAST of Tan0010842 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 ) HSP 1 Score: 78.2 bits (191), Expect = 3.9e-15 Identity = 35/42 (83.33%), Postives = 39/42 (92.86%), Query Frame = 0
BLAST of Tan0010842 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein ) HSP 1 Score: 67.4 bits (163), Expect = 6.9e-12 Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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