Tan0010798 (gene) Snake gourd v1

Overview
NameTan0010798
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionHomologous-pairing protein 2 homolog
LocationLG04: 7511677 .. 7513565 (-)
RNA-Seq ExpressionTan0010798
SyntenyTan0010798
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCGTAAAATTTCCCGCCCATTTCTCTGCACTTCACCGATCAATGGCTCCCAAATCCGATAGCGCAGAAGGTGAGCACTCGCATCGATCTTTTGAACTTTTTTCAATATGTTTTCGTTATTGTAATTTTGGTTTCAATTTTGGATTTATGATGTCTTCAACATAGAAATTGAATCCTTCTATCCTGACTTCTTCCGTTTCTAAAATTGGCAGCGATCGTACTGAACTTCGTAAATGAGGTATTTGTTTCATCACTTTGCTTCACTGATTTCTCTGTTCATCCATTAATCGTCTGCATTTCGCCGATTTACTGGTTTAATTGCTATTCCCCAAGCGTCTGTAGTTCCGTTTCCCCCATTTTGTGCTTAGTGCAGCGAAGGTTGTTGGCTTTTACGATGTCTTCTACTTATATCTTCTTGTTGTTTAGCTGTAGCAAAACGCCAATTTGTATATCGAAGAACTTATATGTCTTCGTCGTTTGTGTGCTGGGTTAATAGACACTCTTAAGAACGCATGTTATTCTCACATGGAGATTGTTGTTTCGGTGGACCTCCATTTCACTGTCGAGTGTGTTTGCTACTGCCTTTCACTATGCAACTCTCCTGCGGCGCTACTATCATCTTTTACTCTTCGGAGAGCTCTTTCGAGCTTTACTGTCTAATTGCATTTGGCGCATTTTTGTTCTGTTCAGCAAAATCGTCCACTGAACTCTCAAAATGTTGCTGATTGCTTACAAAAGTTCAACCTCAAGAAGACGGCGGTGCAAAAGGCACTGGATGCTCTTGCCGATAGTGGAAAGATTTCATTCAAGGAATACGGCAAACAGAAGATATATCTCGCCCGGCAAGACCAATTTAAAATTCCGAACAGCGAGGAACTTACTCAGATGAAGGATGCAAACGCCAAATTGCAACAACATCTAGACGAGCAAAAAAAAGCTATTAGCCAGGTTGAGGAAGGTAATCCCACTTGTGAATTTCAAAGAAGTTTTGAATAACGTAAATCTTATATGTCACTTTAGCCTTTTCAATTACGGTATTCAAATTTCCAGAACATGAAAATGATGGTTCCATGAACTTTTGCAACAGGAATTCGAACGTTGCAGTCTAATTTAACGCTGGAACAGATGCGGGAAAAGGAAGCCAGGCTCAGAGAGGAGGTAGATAGATGCTAAATCAGATAGTTGTAACTTTACTTCGTTCTGATAAGTGATACTGTTATCCTACCCTCTTTATCTGTTGTTAAGGTCTTAAAAAAAATAGCTGTTTTGATAAATGTTTGTCAGGTTAAGGAATTGGAAGACAAATTGGAAATATTGCGCGGAGGTGTTACACTGGTGAGCCCAGAAGACCGCAAAGCAATTGAGCTTATGTACTCTGAGAAATTAAGCCAGTGGCGAAGGCGAAAAAGGATGTTCAAAGATATATGGGATGCTATTACTGAGAACTCACCTAAAGATCTAAAAGAATTTAAGGTTCTCCCTGGTTATTTTCCTCTGCCTCTTTTTACTCAAGTTGTTTGGATAAAATACTTTGTATTCTTGCAGGAAGAACTTGGCATCGAATATGATGAAGATGTAGGCGTGAATTTGCAGTCATTCAGCGACATGTTACCACAAAATCGAAAACGGTCCAGGGGGAAGTGAGTGATACCATAAACTGAGGCGTCCGACAGGAGTAAAACAAAGAAGAATTATTTGCTTATATTACTTTCCTTTAAAGGCAAATACAGGTAGATTCTGTCTGCCTAGAGCTTGGCTTTTGTATCATGAATACTTATCAAGTTGCTCTTGTTGATTCAATGCTAAGTTGAAGGCAACATTTATTTACTGTAATTCTCAGTAAAAGAAACTGCCATTCCTGACACTGTTATTTTTTCTTCAATGGGCC

mRNA sequence

TTCCGTAAAATTTCCCGCCCATTTCTCTGCACTTCACCGATCAATGGCTCCCAAATCCGATAGCGCAGAAGCGATCGTACTGAACTTCGTAAATGAGCAAAATCGTCCACTGAACTCTCAAAATGTTGCTGATTGCTTACAAAAGTTCAACCTCAAGAAGACGGCGGTGCAAAAGGCACTGGATGCTCTTGCCGATAGTGGAAAGATTTCATTCAAGGAATACGGCAAACAGAAGATATATCTCGCCCGGCAAGACCAATTTAAAATTCCGAACAGCGAGGAACTTACTCAGATGAAGGATGCAAACGCCAAATTGCAACAACATCTAGACGAGCAAAAAAAAGCTATTAGCCAGGTTGAGGAAGGAATTCGAACGTTGCAGTCTAATTTAACGCTGGAACAGATGCGGGAAAAGGAAGCCAGGCTCAGAGAGGAGGTTAAGGAATTGGAAGACAAATTGGAAATATTGCGCGGAGGTGTTACACTGGTGAGCCCAGAAGACCGCAAAGCAATTGAGCTTATGTACTCTGAGAAATTAAGCCAGTGGCGAAGGCGAAAAAGGATGTTCAAAGATATATGGGATGCTATTACTGAGAACTCACCTAAAGATCTAAAAGAATTTAAGGAAGAACTTGGCATCGAATATGATGAAGATGTAGGCGTGAATTTGCAGTCATTCAGCGACATGTTACCACAAAATCGAAAACGGTCCAGGGGGAAGTGAGTGATACCATAAACTGAGGCGTCCGACAGGAGTAAAACAAAGAAGAATTATTTGCTTATATTACTTTCCTTTAAAGGCAAATACAGGTAGATTCTGTCTGCCTAGAGCTTGGCTTTTGTATCATGAATACTTATCAAGTTGCTCTTGTTGATTCAATGCTAAGTTGAAGGCAACATTTATTTACTGTAATTCTCAGTAAAAGAAACTGCCATTCCTGACACTGTTATTTTTTCTTCAATGGGCC

Coding sequence (CDS)

ATGGCTCCCAAATCCGATAGCGCAGAAGCGATCGTACTGAACTTCGTAAATGAGCAAAATCGTCCACTGAACTCTCAAAATGTTGCTGATTGCTTACAAAAGTTCAACCTCAAGAAGACGGCGGTGCAAAAGGCACTGGATGCTCTTGCCGATAGTGGAAAGATTTCATTCAAGGAATACGGCAAACAGAAGATATATCTCGCCCGGCAAGACCAATTTAAAATTCCGAACAGCGAGGAACTTACTCAGATGAAGGATGCAAACGCCAAATTGCAACAACATCTAGACGAGCAAAAAAAAGCTATTAGCCAGGTTGAGGAAGGAATTCGAACGTTGCAGTCTAATTTAACGCTGGAACAGATGCGGGAAAAGGAAGCCAGGCTCAGAGAGGAGGTTAAGGAATTGGAAGACAAATTGGAAATATTGCGCGGAGGTGTTACACTGGTGAGCCCAGAAGACCGCAAAGCAATTGAGCTTATGTACTCTGAGAAATTAAGCCAGTGGCGAAGGCGAAAAAGGATGTTCAAAGATATATGGGATGCTATTACTGAGAACTCACCTAAAGATCTAAAAGAATTTAAGGAAGAACTTGGCATCGAATATGATGAAGATGTAGGCGTGAATTTGCAGTCATTCAGCGACATGTTACCACAAAATCGAAAACGGTCCAGGGGGAAGTGA

Protein sequence

MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQMREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWDAITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK
Homology
[Close]
BLAST of Tan0010798 vs. ExPASy Swiss-Prot
Match: Q9FX64 (Homologous-pairing protein 2 homolog OS=Arabidopsis thaliana OX=3702 GN=HOP2 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.3e-89
Identity = 162/226 (71.68%), Postives = 203/226 (89.82%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSD+ EAIVLNFVNEQN+PLN+QN AD LQKFNLKKTAVQKALD+LAD+GKI+FKEY
Sbjct: 1   MAPKSDNTEAIVLNFVNEQNKPLNTQNAADALQKFNLKKTAVQKALDSLADAGKITFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEEL QMK+ NAKLQ+ L E+KK IS VE  I++LQSNLTLE+
Sbjct: 61  GKQKIYIARQDQFEIPNSEELAQMKEDNAKLQEQLQEKKKTISDVESEIKSLQSNLTLEE 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           ++EK+A+LR+EVKE+E+KL  LR G+TLV PED+KA+E MY++K++QWR+RKRMF+DIWD
Sbjct: 121 IQEKDAKLRKEVKEMEEKLVKLREGITLVRPEDKKAVEDMYADKINQWRKRKRMFRDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
            +TENSPKD+KE KEELGIEYDEDVG++ Q+++D++   +KR RG+
Sbjct: 181 TVTENSPKDVKELKEELGIEYDEDVGLSFQAYADLIQHGKKRPRGQ 226

[Close]
BLAST of Tan0010798 vs. ExPASy Swiss-Prot
Match: Q63ZL2 (Homologous-pairing protein 2 homolog OS=Xenopus laevis OX=8355 GN=psmc3ip PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.0e-29
Identity = 79/207 (38.16%), Postives = 122/207 (58.94%), Query Frame = 0 

Query: 4   KSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEYGK 63
           K  +A +I+L ++N+QNRP ++Q+V   LQ+   L KTAV K ++ LA  GKI  K YGK
Sbjct: 5   KEAAASSIILKYLNDQNRPYSTQDVFSNLQRDHGLGKTAVVKTMELLAQKGKIKEKVYGK 64

Query: 64  QKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQMR 123
           QKIY A Q+QF   +  EL  +     +L   L   +++  Q+E  ++ L S+LT E+M 
Sbjct: 65  QKIYFADQEQFPSVSDSELKDLDAQVTELSSKLQSSQQSCRQLESELKDLTSSLTTEEML 124

Query: 124 EKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWDAI 183
           ++ + L+EE    E KL  ++     V+P +++ +         +W++RKRM  DI+DAI
Sbjct: 125 KEVSCLKEECDRHEHKLTNIKSATNHVTPAEKEKVYGERKHFCKEWKKRKRMATDIFDAI 184

Query: 184 TENSPKDLKEFKEELGIEYDEDVGVNL 210
            E  PK  K+F EE+G+E DED  V +
Sbjct: 185 LEGYPKSKKQFFEEVGVETDEDCNVTV 211

[Close]
BLAST of Tan0010798 vs. ExPASy Swiss-Prot
Match: Q91ZY6 (Homologous-pairing protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Psmc3ip PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.8e-27
Identity = 79/209 (37.80%), Postives = 118/209 (56.46%), Query Frame = 0 

Query: 2   APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEY 61
           A  +  A  IVL ++ EQNRP ++Q+V   LQK   L K AV KALD LA  GKI  K Y
Sbjct: 6   AEAAAGAPGIVLRYLQEQNRPYSAQDVFGNLQKEHGLGKAAVVKALDQLAQQGKIKEKTY 65

Query: 62  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 121
           GKQKIY A QDQF   +  +L  +  +   L   +   +++   +E  ++ L S LT  +
Sbjct: 66  GKQKIYFADQDQFDTVSDADLHSLDASIMALTAKVQGLQQSCRHMEAELKELTSALTTPE 125

Query: 122 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 181
           M+ +   L++E     ++L+ ++     V+PE+++ +     +   +WR+RKRM  ++ D
Sbjct: 126 MQTEIQELKKECARYTERLKNIKAATNHVTPEEKEKVYRERQKYCKEWRKRKRMTTELCD 185

Query: 182 AITENSPKDLKEFKEELGIEYDEDVGVNL 210
           AI E  PK  K+F EE+GIE DED  V L
Sbjct: 186 AILEGYPKSKKQFFEEVGIETDEDHNVTL 214

[Close]
BLAST of Tan0010798 vs. ExPASy Swiss-Prot
Match: O35047 (Homologous-pairing protein 2 homolog OS=Mus musculus OX=10090 GN=Psmc3ip PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 77/209 (36.84%), Postives = 120/209 (57.42%), Query Frame = 0 

Query: 2   APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEY 61
           A  +  A  I+L ++ EQNRP ++Q+V   LQK   L K AV KALD LA  GKI  K Y
Sbjct: 6   AEAAAGAPGIILRYLQEQNRPYSAQDVFGNLQKEHGLGKAAVVKALDQLAQEGKIKEKTY 65

Query: 62  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 121
           GKQKIY A Q+QF   +  +L  +  +   L   +   +++   +E  ++ L S LT  +
Sbjct: 66  GKQKIYFADQNQFDTVSDADLHGLDASIVALTAKVQSLQQSCRHMEAELKELTSALTTPE 125

Query: 122 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 181
           M+++   L++E  +  ++L+ ++     V+PE+++ +     +   +WR+RKRM  ++ D
Sbjct: 126 MQKEIQELKKECAQYTERLKNIKAATNHVTPEEKEKVYRDRQKYCKEWRKRKRMTTELCD 185

Query: 182 AITENSPKDLKEFKEELGIEYDEDVGVNL 210
           AI E  PK  K+F EE+GIE DED  V L
Sbjct: 186 AILEGYPKSKKQFFEEVGIETDEDHNVLL 214

[Close]
BLAST of Tan0010798 vs. ExPASy Swiss-Prot
Match: Q9P2W1 (Homologous-pairing protein 2 homolog OS=Homo sapiens OX=9606 GN=PSMC3IP PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.0e-26
Identity = 75/209 (35.89%), Postives = 117/209 (55.98%), Query Frame = 0 

Query: 2   APKSDSAEAIVLNFVNEQNRPLNSQNVADCLQK-FNLKKTAVQKALDALADSGKISFKEY 61
           A  +  A  I+L ++ EQNRP +SQ+V   LQ+   L K  V K L+ LA  GKI  K Y
Sbjct: 6   AEAAAGAAGILLRYLQEQNRPYSSQDVFGNLQREHGLGKAVVVKTLEQLAQQGKIKEKMY 65

Query: 62  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 121
           GKQKIY A QDQF + +  +L  +      L   +   +++   +E  ++ L S LT  +
Sbjct: 66  GKQKIYFADQDQFDMVSDADLQVLDGKIVALTAKVQSLQQSCRYMEAELKELSSALTTPE 125

Query: 122 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 181
           M+++   L++E     ++L+ ++     V+PE+++ +     +   +WR+RKRM  ++ D
Sbjct: 126 MQKEIQELKKECAGYRERLKNIKAATNHVTPEEKEQVYRERQKYCKEWRKRKRMATELSD 185

Query: 182 AITENSPKDLKEFKEELGIEYDEDVGVNL 210
           AI E  PK  K+F EE+GIE DED  V L
Sbjct: 186 AILEGYPKSKKQFFEEVGIETDEDYNVTL 214

[Close]
BLAST of Tan0010798 vs. NCBI nr
Match: XP_038893461.1 (homologous-pairing protein 2 homolog [Benincasa hispida])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 209/226 (92.48%), Postives = 218/226 (96.46%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALDALADSG+ISFKEY
Sbjct: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDALADSGRISFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQQHLDE KK ISQVEE IRTLQSNLTLEQ
Sbjct: 61  GKQKIYIARQDQFQIPNSEELTQMKEANAKLQQHLDEHKKVISQVEEEIRTLQSNLTLEQ 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKEA LR+EVKELEDKLEILRGGVTLVSPEDRKAIE ++SEKLSQWR+RKRMFKDIWD
Sbjct: 121 MREKEAMLRKEVKELEDKLEILRGGVTLVSPEDRKAIEQIFSEKLSQWRKRKRMFKDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLK+FKEELGIEYDEDVGVNLQSFSDMLPQNRKR RGK
Sbjct: 181 AITENSPKDLKDFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK 226

[Close]
BLAST of Tan0010798 vs. NCBI nr
Match: XP_008446584.1 (PREDICTED: homologous-pairing protein 2 homolog isoform X1 [Cucumis melo] >XP_008446586.1 PREDICTED: homologous-pairing protein 2 homolog isoform X1 [Cucumis melo] >XP_008446587.1 PREDICTED: homologous-pairing protein 2 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 394.8 bits (1013), Expect = 4.9e-106
Identity = 206/226 (91.15%), Postives = 217/226 (96.02%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALD+LAD+G+ISFKEY
Sbjct: 40  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDSLADTGRISFKEY 99

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQ+HLDE KKAISQVEE IRTLQSNLTLEQ
Sbjct: 100 GKQKIYIARQDQFQIPNSEELTQMKEANAKLQKHLDEHKKAISQVEEEIRTLQSNLTLEQ 159

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKE  LR+EVKELEDKLE+LR GVTLVSPEDRKAIE +YSEKLSQWR+RKRMFKDIWD
Sbjct: 160 MREKEVMLRKEVKELEDKLEVLRRGVTLVSPEDRKAIEQIYSEKLSQWRKRKRMFKDIWD 219

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RGK
Sbjct: 220 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK 265

[Close]
BLAST of Tan0010798 vs. NCBI nr
Match: KAA0034541.1 (homologous-pairing protein 2-like protein isoform X1 [Cucumis melo var. makuwa] >TYK09095.1 homologous-pairing protein 2-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 394.8 bits (1013), Expect = 4.9e-106
Identity = 206/226 (91.15%), Postives = 217/226 (96.02%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALD+LAD+G+ISFKEY
Sbjct: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDSLADTGRISFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQ+HLDE KKAISQVEE IRTLQSNLTLEQ
Sbjct: 61  GKQKIYIARQDQFQIPNSEELTQMKEANAKLQKHLDEHKKAISQVEEEIRTLQSNLTLEQ 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKE  LR+EVKELEDKLE+LR GVTLVSPEDRKAIE +YSEKLSQWR+RKRMFKDIWD
Sbjct: 121 MREKEVMLRKEVKELEDKLEVLRRGVTLVSPEDRKAIEQIYSEKLSQWRKRKRMFKDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RGK
Sbjct: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK 226

[Close]
BLAST of Tan0010798 vs. NCBI nr
Match: XP_022150551.1 (homologous-pairing protein 2 homolog [Momordica charantia])

HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 206/226 (91.15%), Postives = 215/226 (95.13%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLN QNVAD LQKFNLKKTAVQKALD LADSG+ISFKEY
Sbjct: 1   MAPKSDSAEAIVLNFVNEQNRPLNVQNVADSLQKFNLKKTAVQKALDTLADSGRISFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIYLARQDQFKIPN EELTQMK+ANAKLQQHLDEQK+AI QVEE IRTLQSNLTLEQ
Sbjct: 61  GKQKIYLARQDQFKIPNGEELTQMKEANAKLQQHLDEQKRAIGQVEEEIRTLQSNLTLEQ 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKEA LR+EVKELEDKL+ILRGGVTLV PE+RKAIE +YSEKLSQWR+RK+MFKDIWD
Sbjct: 121 MREKEAMLRKEVKELEDKLKILRGGVTLVRPEERKAIEHIYSEKLSQWRKRKKMFKDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLKEFKEELGIEYDEDVGVN QSFSDMLPQNRKR RGK
Sbjct: 181 AITENSPKDLKEFKEELGIEYDEDVGVNFQSFSDMLPQNRKRPRGK 226

[Close]
BLAST of Tan0010798 vs. NCBI nr
Match: XP_008446588.1 (PREDICTED: homologous-pairing protein 2 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 205/225 (91.11%), Postives = 216/225 (96.00%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALD+LAD+G+ISFKEY
Sbjct: 40  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDSLADTGRISFKEY 99

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQ+HLDE KKAISQVEE IRTLQSNLTLEQ
Sbjct: 100 GKQKIYIARQDQFQIPNSEELTQMKEANAKLQKHLDEHKKAISQVEEEIRTLQSNLTLEQ 159

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKE  LR+EVKELEDKLE+LR GVTLVSPEDRKAIE +YSEKLSQWR+RKRMFKDIWD
Sbjct: 160 MREKEVMLRKEVKELEDKLEVLRRGVTLVSPEDRKAIEQIYSEKLSQWRKRKRMFKDIWD 219

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRG 226
           AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RG
Sbjct: 220 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRG 264

[Close]
BLAST of Tan0010798 vs. ExPASy TrEMBL
Match: A0A1S3BG28 (Homologous-pairing protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103489274 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106
Identity = 206/226 (91.15%), Postives = 217/226 (96.02%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALD+LAD+G+ISFKEY
Sbjct: 40  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDSLADTGRISFKEY 99

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQ+HLDE KKAISQVEE IRTLQSNLTLEQ
Sbjct: 100 GKQKIYIARQDQFQIPNSEELTQMKEANAKLQKHLDEHKKAISQVEEEIRTLQSNLTLEQ 159

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKE  LR+EVKELEDKLE+LR GVTLVSPEDRKAIE +YSEKLSQWR+RKRMFKDIWD
Sbjct: 160 MREKEVMLRKEVKELEDKLEVLRRGVTLVSPEDRKAIEQIYSEKLSQWRKRKRMFKDIWD 219

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RGK
Sbjct: 220 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK 265

[Close]
BLAST of Tan0010798 vs. ExPASy TrEMBL
Match: A0A5A7SYM2 (Homologous-pairing protein 2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00850 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.4e-106
Identity = 206/226 (91.15%), Postives = 217/226 (96.02%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALD+LAD+G+ISFKEY
Sbjct: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDSLADTGRISFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQ+HLDE KKAISQVEE IRTLQSNLTLEQ
Sbjct: 61  GKQKIYIARQDQFQIPNSEELTQMKEANAKLQKHLDEHKKAISQVEEEIRTLQSNLTLEQ 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKE  LR+EVKELEDKLE+LR GVTLVSPEDRKAIE +YSEKLSQWR+RKRMFKDIWD
Sbjct: 121 MREKEVMLRKEVKELEDKLEVLRRGVTLVSPEDRKAIEQIYSEKLSQWRKRKRMFKDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RGK
Sbjct: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK 226

[Close]
BLAST of Tan0010798 vs. ExPASy TrEMBL
Match: A0A6J1DBV0 (Homologous-pairing protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111018666 PE=3 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 7.0e-106
Identity = 206/226 (91.15%), Postives = 215/226 (95.13%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLN QNVAD LQKFNLKKTAVQKALD LADSG+ISFKEY
Sbjct: 1   MAPKSDSAEAIVLNFVNEQNRPLNVQNVADSLQKFNLKKTAVQKALDTLADSGRISFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIYLARQDQFKIPN EELTQMK+ANAKLQQHLDEQK+AI QVEE IRTLQSNLTLEQ
Sbjct: 61  GKQKIYLARQDQFKIPNGEELTQMKEANAKLQQHLDEQKRAIGQVEEEIRTLQSNLTLEQ 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKEA LR+EVKELEDKL+ILRGGVTLV PE+RKAIE +YSEKLSQWR+RK+MFKDIWD
Sbjct: 121 MREKEAMLRKEVKELEDKLKILRGGVTLVRPEERKAIEHIYSEKLSQWRKRKKMFKDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
           AITENSPKDLKEFKEELGIEYDEDVGVN QSFSDMLPQNRKR RGK
Sbjct: 181 AITENSPKDLKEFKEELGIEYDEDVGVNFQSFSDMLPQNRKRPRGK 226

[Close]
BLAST of Tan0010798 vs. ExPASy TrEMBL
Match: A0A1S3BG80 (Homologous-pairing protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103489274 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.1e-106
Identity = 205/225 (91.11%), Postives = 216/225 (96.00%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQN AD LQKFNLKKTAVQKALD+LAD+G+ISFKEY
Sbjct: 40  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADSLQKFNLKKTAVQKALDSLADTGRISFKEY 99

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEELTQMK+ANAKLQ+HLDE KKAISQVEE IRTLQSNLTLEQ
Sbjct: 100 GKQKIYIARQDQFQIPNSEELTQMKEANAKLQKHLDEHKKAISQVEEEIRTLQSNLTLEQ 159

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKE  LR+EVKELEDKLE+LR GVTLVSPEDRKAIE +YSEKLSQWR+RKRMFKDIWD
Sbjct: 160 MREKEVMLRKEVKELEDKLEVLRRGVTLVSPEDRKAIEQIYSEKLSQWRKRKRMFKDIWD 219

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRG 226
           AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RG
Sbjct: 220 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRG 264

[Close]
BLAST of Tan0010798 vs. ExPASy TrEMBL
Match: A0A6J1JDK5 (Homologous-pairing protein 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111483540 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 206/226 (91.15%), Postives = 216/226 (95.58%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSDSAEAIVLNFVNEQNRPLNSQNVAD LQKFNLKKT VQKALDALADSG+ISFKEY
Sbjct: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADSLQKFNLKKTGVQKALDALADSGRISFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIYLARQDQFKIPNSEELTQMK+ANAKLQQHL EQKKAI+QVEE IRTLQSNLTL++
Sbjct: 61  GKQKIYLARQDQFKIPNSEELTQMKEANAKLQQHLAEQKKAITQVEEEIRTLQSNLTLKE 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           MREKEA LR+EVKELE+KLE LRGGVTLVSPEDRKAIE +YSEKL QWR+RKRMFKDIWD
Sbjct: 121 MREKEAMLRKEVKELEEKLETLRGGVTLVSPEDRKAIEQIYSEKLGQWRKRKRMFKDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
            ITENSPK+LKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKR RGK
Sbjct: 181 VITENSPKNLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRPRGK 226

[Close]
BLAST of Tan0010798 vs. TAIR 10
Match: AT1G13330.1 (Arabidopsis Hop2 homolog )

HSP 1 Score: 329.3 bits (843), Expect = 2.4e-90
Identity = 162/226 (71.68%), Postives = 203/226 (89.82%), Query Frame = 0 

Query: 1   MAPKSDSAEAIVLNFVNEQNRPLNSQNVADCLQKFNLKKTAVQKALDALADSGKISFKEY 60
           MAPKSD+ EAIVLNFVNEQN+PLN+QN AD LQKFNLKKTAVQKALD+LAD+GKI+FKEY
Sbjct: 1   MAPKSDNTEAIVLNFVNEQNKPLNTQNAADALQKFNLKKTAVQKALDSLADAGKITFKEY 60

Query: 61  GKQKIYLARQDQFKIPNSEELTQMKDANAKLQQHLDEQKKAISQVEEGIRTLQSNLTLEQ 120
           GKQKIY+ARQDQF+IPNSEEL QMK+ NAKLQ+ L E+KK IS VE  I++LQSNLTLE+
Sbjct: 61  GKQKIYIARQDQFEIPNSEELAQMKEDNAKLQEQLQEKKKTISDVESEIKSLQSNLTLEE 120

Query: 121 MREKEARLREEVKELEDKLEILRGGVTLVSPEDRKAIELMYSEKLSQWRRRKRMFKDIWD 180
           ++EK+A+LR+EVKE+E+KL  LR G+TLV PED+KA+E MY++K++QWR+RKRMF+DIWD
Sbjct: 121 IQEKDAKLRKEVKEMEEKLVKLREGITLVRPEDKKAVEDMYADKINQWRKRKRMFRDIWD 180

Query: 181 AITENSPKDLKEFKEELGIEYDEDVGVNLQSFSDMLPQNRKRSRGK 227
            +TENSPKD+KE KEELGIEYDEDVG++ Q+++D++   +KR RG+
Sbjct: 181 TVTENSPKDVKELKEELGIEYDEDVGLSFQAYADLIQHGKKRPRGQ 226

The following BLAST results are available for this feature:
BLAST of Tan0010798 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FX643.3e-8971.68Homologous-pairing protein 2 homolog OS=Arabidopsis thaliana OX=3702 GN=HOP2 PE=... [more]
Q63ZL21.0e-2938.16Homologous-pairing protein 2 homolog OS=Xenopus laevis OX=8355 GN=psmc3ip PE=2 S... [more]
Q91ZY64.8e-2737.80Homologous-pairing protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Psmc3ip PE... [more]
O350471.8e-2636.84Homologous-pairing protein 2 homolog OS=Mus musculus OX=10090 GN=Psmc3ip PE=1 SV... [more]
Q9P2W19.0e-2635.89Homologous-pairing protein 2 homolog OS=Homo sapiens OX=9606 GN=PSMC3IP PE=1 SV=... [more]
BLAST of Tan0010798 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038893461.12.0e-10792.48homologous-pairing protein 2 homolog [Benincasa hispida][more]
XP_008446584.14.9e-10691.15PREDICTED: homologous-pairing protein 2 homolog isoform X1 [Cucumis melo] >XP_00... [more]
KAA0034541.14.9e-10691.15homologous-pairing protein 2-like protein isoform X1 [Cucumis melo var. makuwa] ... [more]
XP_022150551.11.4e-10591.15homologous-pairing protein 2 homolog [Momordica charantia][more]
XP_008446588.11.9e-10591.11PREDICTED: homologous-pairing protein 2 homolog isoform X2 [Cucumis melo][more]
BLAST of Tan0010798 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BG282.4e-10691.15Homologous-pairing protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103489274 PE=... [more]
A0A5A7SYM22.4e-10691.15Homologous-pairing protein 2 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1DBV07.0e-10691.15Homologous-pairing protein 2 homolog OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A1S3BG809.1e-10691.11Homologous-pairing protein 2 homolog OS=Cucumis melo OX=3656 GN=LOC103489274 PE=... [more]
A0A6J1JDK51.2e-10591.15Homologous-pairing protein 2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111483540... [more]
BLAST of Tan0010798 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G13330.12.4e-9071.68Arabidopsis Hop2 homolog [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..145
NoneNo IPR availableCOILSCoilCoilcoord: 77..115
IPR040661Leucine zipper with capping helix domainPFAMPF18517LZ3wCHcoord: 149..206
e-value: 1.5E-17
score: 63.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..79
e-value: 2.5E-24
score: 87.0
IPR010776Homologous-pairing protein 2, winged helix domainPFAMPF07106TBPIPcoord: 8..68
e-value: 1.5E-25
score: 88.9
IPR040461Homologous-pairing protein 2PANTHERPTHR15938TBP-1 INTERACTING PROTEINcoord: 1..221
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 6..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0010798.1Tan0010798.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007129 homologous chromosome pairing at meiosis
biological_process GO:0000709 meiotic joint molecule formation
biological_process GO:0010774 meiotic strand invasion involved in reciprocal meiotic recombination
biological_process GO:0050790 regulation of catalytic activity
biological_process GO:0007131 reciprocal meiotic recombination
cellular_component GO:0000794 condensed nuclear chromosome
cellular_component GO:0120231 DNA recombinase auxiliary factor complex
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0120230 recombinase activator activity