Tan0010771 (gene) Snake gourd v1

Overview


Name	Tan0010771
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Legume-specific protein
Location	LG08: 72428675 .. 72429274 (+)
RNA-Seq Expression	Tan0010771
Synteny	Tan0010771

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACAAATTCCCTCTCTGAATTTTTCTCCAATCTCTCTCAGAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCGATTGTTCAATACAAGAATGACAAACAAGTTCCCCCGATCCGATCTTGGCTCGGCGATTCGCCGTCAACGTCCTACATCAGACTCCCAAGCGGCGATTCCGGCAGGTTTCAATTCCAATCCGACGGTTCATATTCCGCCACCTCACCTGCGAAATCAGCCTCTTCCACCGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCACCTGACGCCTCGTCGGGTCGCCGCCTGATCCGACCACTGGCGGTGGGTTTGATCAGGAAAAAAAAAGAAAGAAAGAAAGAAAAGAAGCGTTTATAATTCCTGGCTTTTATTTTTATTTTTTGTTTGTTAAAGGGCCTAAGTGTTTGGAAAGCCCAACGGCACCGGCACTCAGGTTTCTGTAATTAGTTAATGATGAAAAATGGAAAAAAAAAGGGGGAAAAAGTAAAAAGTGATGGAGATTGGAAATCTCTGTAAGATGTGAATATTGATTAATGTAATTGTTTGAGATGAAGTTCTTTATTTGGTTTA

mRNA sequence

GTACAAATTCCCTCTCTGAATTTTTCTCCAATCTCTCTCAGAAATGGAAGGTCTAATTCCCTTTGTTTACAAAGCGATTGTTCAATACAAGAATGACAAACAAGTTCCCCCGATCCGATCTTGGCTCGGCGATTCGCCGTCAACGTCCTACATCAGACTCCCAAGCGGCGATTCCGGCAGGTTTCAATTCCAATCCGACGGTTCATATTCCGCCACCTCACCTGCGAAATCAGCCTCTTCCACCGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCACCTGACGCCTCGTCGGGTCGCCGCCTGATCCGACCACTGGCGGTGGGTTTGATCAGGAAAAAAAAAGAAAGAAAGAAAGAAAAGAAGCGTTTATAATTCCTGGCTTTTATTTTTATTTTTTGTTTGTTAAAGGGCCTAAGTGTTTGGAAAGCCCAACGGCACCGGCACTCAGGTTTCTGTAATTAGTTAATGATGAAAAATGGAAAAAAAAAGGGGGAAAAAGTAAAAAGTGATGGAGATTGGAAATCTCTGTAAGATGTGAATATTGATTAATGTAATTGTTTGAGATGAAGTTCTTTATTTGGTTTA

Coding sequence (CDS)

ATGGAAGGTCTAATTCCCTTTGTTTACAAAGCGATTGTTCAATACAAGAATGACAAACAAGTTCCCCCGATCCGATCTTGGCTCGGCGATTCGCCGTCAACGTCCTACATCAGACTCCCAAGCGGCGATTCCGGCAGGTTTCAATTCCAATCCGACGGTTCATATTCCGCCACCTCACCTGCGAAATCAGCCTCTTCCACCGCCACCCAGATTCTCGTTGCTACCGGAGTTCAGTCGCCGCTCCGCCACCTGACGCCTCGTCGGGTCGCCGCCTGA

Protein sequence

MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSPAKSASSTATQILVATGVQSPLRHLTPRRVAA

Homology

[Close]

BLAST of Tan0010771 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156.8 bits (395), Expect = 9.1e-35
Identity = 80/91 (87.91%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEGLIPFVY+AIV YKNDKQVPPIRSWL DSPS SYIRLPSGDSGRF FQSDGSY+ATSP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSDGSYTATSP 60

Query: 61 AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
          +KS SSTATQILVATGVQSPLR L P RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

[Close]

BLAST of Tan0010771 vs. NCBI nr
Match: KAG7027938.1 (hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.1 bits (388), Expect = 5.9e-34
Identity = 79/91 (86.81%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEGLIPFVY+AIV YKNDKQVPPIRSWL DSPS SYIRLPSGDSGRF FQS GSY+ATSP
Sbjct: 1  MEGLIPFVYRAIVHYKNDKQVPPIRSWLTDSPSASYIRLPSGDSGRFLFQSGGSYTATSP 60

Query: 61 AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
          +KS SSTATQILVATGVQSPLR L P RVAA
Sbjct: 61 SKSVSSTATQILVATGVQSPLRQLAPSRVAA 91

[Close]

BLAST of Tan0010771 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.3 bits (373), Expect = 3.2e-32
Identity = 79/92 (85.87%), Postives = 84/92 (91.30%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEG+IPFVYKAIVQYKN+KQVP IRSWL DSPSTSYIRLPSGDSGRFQ   DGSYSA SP
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ---DGSYSAASP 60

Query: 61 -AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
           +KSASST TQIL++TGVQSPLRHLTPRRVAA
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVAA 89

[Close]

BLAST of Tan0010771 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.7 bits (369), Expect = 9.5e-32
Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEG+IPFVYKAIVQYKN+KQVP IRSWL DSPSTSYIRLPSGDSGRFQ   DGSYSA SP
Sbjct: 1  MEGIIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQ---DGSYSAASP 60

Query: 61 -AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
           +KSASST TQIL++TGVQSPLRHLTPRRV A
Sbjct: 61 SSKSASSTTTQILISTGVQSPLRHLTPRRVVA 89

[Close]

BLAST of Tan0010771 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 2.7e-31
Identity = 77/91 (84.62%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEGLIPFVYKAIVQYKN+KQVP IRSWL DSPSTSYIRLPSGDSGRFQFQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
            ++S+TATQILV+TGVQSPLRHLT RRVAA
Sbjct: 61 --TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of Tan0010771 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 77/91 (84.62%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEGLIPFVYKAIVQYKN+KQVP IRSWL DSPSTSYIRLPSGDSGRFQFQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
            ++S+TATQILV+TGVQSPLRHLT RRVAA
Sbjct: 61 --TSSTTATQILVSTGVQSPLRHLTTRRVAA 89

[Close]

BLAST of Tan0010771 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.0e-31
Identity = 77/91 (84.62%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSDGSYSATSP 60
          MEGLIPFVYKAIVQYKN+KQVP IRSWL DSPSTSYIRLPSGDSGRFQFQSD S S+ SP
Sbjct: 1  MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQFQSDASPSSKSP 60

Query: 61 AKSASSTATQILVATGVQSPLRHLTPRRVAA 92
              SST TQILV+TGVQSPLRHLT RRVAA
Sbjct: 61 ---TSSTTTQILVSTGVQSPLRHLTTRRVAA 88

[Close]

BLAST of Tan0010771 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 61/94 (64.89%), Postives = 75/94 (79.79%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSD-GSYSATS 60
          MEGLIPFVYKAI+QYK DK   PI SWL +SPS SY+RLP+GDSGRFQ Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PAKS--ASSTATQILVATGVQSPLRHLTPRRVAA 92
          P+ +   SS+ATQI+V++GVQSP + LT RR+AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRRIAA 94

[Close]

BLAST of Tan0010771 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 6.9e-20
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQFQSD-GSYSATS 60
          MEGLIPFVYKAI+QYK DK   PI SWL +SPS SY+RLP+GDSGRFQ Q+   S+SA S
Sbjct: 1  MEGLIPFVYKAIMQYKGDKDGHPIGSWLCESPSYSYMRLPAGDSGRFQIQAPASSFSAAS 60

Query: 61 PAKS--ASSTATQILVATGVQSPLRHLTPRRVAA 92
          P+ +   SS+ATQI+V++GVQSP + LT R +AA
Sbjct: 61 PSSTNPNSSSATQIIVSSGVQSPHQCLTHRPIAA 94

[Close]

BLAST of Tan0010771 vs. ExPASy TrEMBL
Match: A0A6J1AT90 (uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC110420657 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.4e-19
Identity = 57/98 (58.16%), Postives = 75/98 (76.53%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRFQ------FQSD-G 60
          MEGLIPFVY+AIVQYKN ++   + +W  +SPS SY+RLP+GDSGRFQ      FQSD G
Sbjct: 1  MEGLIPFVYRAIVQYKNGRE-GVLATWFSESPSASYMRLPTGDSGRFQVSDKQVFQSDYG 60

Query: 61 SYSATSPAKSASSTATQILVATGVQSPLRHLTPRRVAA 92
           +SA+SP+  A+S+ T+I+++TGVQSP+  LT RRV A
Sbjct: 61 DFSASSPSSMATSSTTKIILSTGVQSPVCRLTSRRVVA 97

[Close]

BLAST of Tan0010771 vs. TAIR 10
Match: AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 2.5e-06
Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQ--YKNDKQVPPIRSWLGDSPSTSYIRLPSGDSGRF---QFQSDGSY 60
          MEGLIP VYKA++Q  Y N+ Q            S+ Y+RLP GDSGRF        G  
Sbjct: 1  MEGLIPLVYKAVMQIRYGNESQ---------QLSSSYYVRLP-GDSGRFVRSDLDVSGPG 60

Query: 61 SATSPAKSASSTATQILVATGVQSPL 82
          S +S   S+S++ T   V  GVQSP+
Sbjct: 61 SNSSNRASSSTSTTTFAVYAGVQSPV 76

[Close]

BLAST of Tan0010771 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.3e-04
Identity = 31/79 (39.24%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 1  MEGLIPFVYKAIVQYKNDKQVPPIRSWLGDSPSTS--YIRLPSGDSGRF------QFQSD 60
          MEGLIPF+YKAIV YK +     +      SPS +  Y+RLP   S RF      +F +D
Sbjct: 1  MEGLIPFLYKAIVMYKREGSFSSVLLSDHHSPSNAGYYMRLPGDSSSRFRTSDLRRFGTD 60

Query: 61 G-SYSATSPAKSASSTATQ 71
                T+P+ S S  +T+
Sbjct: 61 RFGMLETTPSSSPSRVSTR 79

The following BLAST results are available for this feature:

BLAST of Tan0010771 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010771 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596392.1	9.1e-35	87.91	hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027938.1	5.9e-34	86.81	hypothetical protein SDJN02_09117, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG7017269.1	3.2e-32	85.87	hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6580521.1	9.5e-32	84.78	hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0044116.1	2.7e-31	84.62	legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific p...	[more]

BLAST of Tan0010771 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DNC7	1.3e-31	84.62	Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LD26	3.0e-31	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1	[more]
K7MT87	1.1e-20	64.89	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1	[more]
A0A0B2P904	6.9e-20	63.83	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1	[more]
A0A6J1AT90	3.4e-19	58.16	uncharacterized protein LOC110420657 OS=Herrania umbratica OX=108875 GN=LOC11042...	[more]

BLAST of Tan0010771 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37750.1	2.5e-06	43.02	unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bact...	[more]
AT5G02090.1	2.3e-04	39.24	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34670	EXPRESSED PROTEIN	coord: 1..91
None	No IPR available	PANTHER	PTHR34670:SF10	LEGUME-SPECIFIC PROTEIN	coord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010771.1	Tan0010771.1	mRNA