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Tan0010733 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCTATATTACATGGACTTGACTGTGACCTTTTACCTCCTCAGCCGGTTTCCCTTTCCCCTTCCTCTCCTCTTCCCTTTATTACCTCCCCATCTCTGCAGTCCTTAGCCCACCACTCTCTCTCTCTCCTCTCTTTCTCTCTCTCTCTCTTGACCGTAAAATCAAAACCCTGCCCTTCATTCTACGGTCACCGGCGGCCAAGAAAAAACATTTTTTTTTTCTTGTGGGTGACATTAGAGATAGAAAGTCGACGACTTTACTACGATATGCCCGAGAAGAATATCCAATTGGGTCACGTCAAATTTCAGCTTACGGTGGCGGTGACGGCGGAGGTAGCGGTGGCGGTGGCGGGGGAGTTTGATGGTGAGGGCGTTTTTTAGCTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTATCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCACCGCCGGTGCTGCTTCTGTTTATTCCGGTGCTTATTATGTCGTTGCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGGCGGAGGAGCACCGTGTGCCCGCTGCCGGCGGTGGCCACGATTCGGCTTAAATTTTTTTTTTTTCCTTTTGTTTTTCTTTTGGTTTTTTTGATTGGTTCTTCTTTGTTCAATGTATAATGGAAAAATTTTGAGTGTAGTTGAATATTTTTC GCCTATATTACATGGACTTGACTGTGACCTTTTACCTCCTCAGCCGGTTTCCCTTTCCCCTTCCTCTCCTCTTCCCTTTATTACCTCCCCATCTCTGCAGTCCTTAGCCCACCACTCTCTCTCTCTCCTCTCTTTCTCTCTCTCTCTCTTGACCGTAAAATCAAAACCCTGCCCTTCATTCTACGGTCACCGGCGGCCAAGAAAAAACATTTTTTTTTTCTTGTGGGTGACATTAGAGATAGAAAGTCGACGACTTTACTACGATATGCCCGAGAAGAATATCCAATTGGGTCACGTCAAATTTCAGCTTACGGTGGCGGTGACGGCGGAGGTAGCGGTGGCGGTGGCGGGGGAGTTTGATGGTGAGGGCGTTTTTTAGCTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTATCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCACCGCCGGTGCTGCTTCTGTTTATTCCGGTGCTTATTATGTCGTTGCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGGCGGAGGAGCACCGTGTGCCCGCTGCCGGCGGTGGCCACGATTCGGCTTAAATTTTTTTTTTTTCCTTTTGTTTTTCTTTTGGTTTTTTTGATTGGTTCTTCTTTGTTCAATGTATAATGGAAAAATTTTGAGTGTAGTTGAATATTTTTC ATGGTGAGGGCGTTTTTTAGCTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTATCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCACCGCCGGTGCTGCTTCTGTTTATTCCGGTGCTTATTATGTCGTTGCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGGCGGAGGAGCACCGTGTGCCCGCTGCCGGCGGTGGCCACGATTCGGCTTAA MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA Homology
BLAST of Tan0010733 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06 Identity = 32/53 (60.38%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy Swiss-Prot
Match: Q8RWS1 (Protein ORGAN SIZE RELATED 1 OS=Arabidopsis thaliana OX=3702 GN=ORS1 PE=2 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.0e-06 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.7e-06 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Tan0010733 vs. NCBI nr
Match: KAG6603314.1 (hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111.7 bits (278), Expect = 2.8e-21 Identity = 68/77 (88.31%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of Tan0010733 vs. NCBI nr
Match: KAA0025988.1 (hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 1.7e-13 Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0
BLAST of Tan0010733 vs. NCBI nr
Match: TYK04223.1 (hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 4.8e-13 Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of Tan0010733 vs. NCBI nr
Match: KAG2683596.1 (hypothetical protein I3760_10G039000 [Carya illinoinensis] >KAG6690947.1 hypothetical protein I3842_10G039100 [Carya illinoinensis] >KAG7958838.1 hypothetical protein I3843_10G039300 [Carya illinoinensis]) HSP 1 Score: 69.3 bits (168), Expect = 1.6e-08 Identity = 40/56 (71.43%), Postives = 51/56 (91.07%), Query Frame = 0
BLAST of Tan0010733 vs. NCBI nr
Match: KAG2687345.1 (hypothetical protein I3760_09G047200 [Carya illinoinensis] >KAG6694413.1 hypothetical protein I3842_09G047400 [Carya illinoinensis] >KAG7962070.1 hypothetical protein I3843_09G047700 [Carya illinoinensis]) HSP 1 Score: 68.9 bits (167), Expect = 2.1e-08 Identity = 39/60 (65.00%), Postives = 52/60 (86.67%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy TrEMBL
Match: A0A0A0L0Y7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G432970 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 6.3e-19 Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy TrEMBL
Match: A0A5A7SII5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003090 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.0e-14 Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy TrEMBL
Match: A0A5D3BWW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold24967G00300 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.3e-13 Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy TrEMBL
Match: A0A5B7AL58 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276 PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.0e-09 Identity = 39/60 (65.00%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of Tan0010733 vs. ExPASy TrEMBL
Match: A0A2N9F7M5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10977 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.5e-09 Identity = 38/55 (69.09%), Postives = 52/55 (94.55%), Query Frame = 0
BLAST of Tan0010733 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 1.4e-07 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Tan0010733 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size ) HSP 1 Score: 52.4 bits (124), Expect = 1.9e-07 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Tan0010733 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like ) HSP 1 Score: 52.0 bits (123), Expect = 2.5e-07 Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Tan0010733 vs. TAIR 10
Match: AT2G41225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 40.0 bits (92), Expect = 9.7e-04 Identity = 23/39 (58.97%), Postives = 33/39 (84.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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