Tan0010694 (gene) Snake gourd v1

Overview


Name	Tan0010694
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Hexose transporter HXT14
Location	LG11: 6470092 .. 6470422 (-)
RNA-Seq Expression	Tan0010694
Synteny	Tan0010694

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTTATTGCTTGGGCCGCAGCTCTCCAGGTGCAATTCCCTGTTTTAGATTTTAACTTTTAACTTCACCGCTTTTCTTTTTCTACTCGTACTATCTGTTTTTGTTAAGGGGCTGAAAATTGTTGAACTGTTAGCTGATTTGGATTCTGGGATTGATTTGAACTCTAGAGTTGAATGTGGGGAATAATGTCTGGTACAGGGGCACATGATGTGGTTGCAGAAGCAGGATTCTTTCAAGCACAAGTTTGGAACTCCCAATCAAGAAAATGATCCTGAAAAATGA

mRNA sequence

ATGCAAGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTTATTGCTTGGGCCGCAGCTCTCCAGGGGCACATGATGTGGTTGCAGAAGCAGGATTCTTTCAAGCACAAGTTTGGAACTCCCAATCAAGAAAATGATCCTGAAAAATGA

Coding sequence (CDS)

ATGCAAGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCCTTCCTTATTGCTTGGGCCGCAGCTCTCCAGGGGCACATGATGTGGTTGCAGAAGCAGGATTCTTTCAAGCACAAGTTTGGAACTCCCAATCAAGAAAATGATCCTGAAAAATGA

Protein sequence

MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK

Homology

[Close]

BLAST of Tan0010694 vs. NCBI nr
Match: XP_022134369.1 (uncharacterized protein LOC111006648 [Momordica charantia])

HSP 1 Score: 109.4 bits (272), Expect = 9.7e-21
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M VKNLLKDKKFWFASFLIAWAAALQGHMMWLQ+QDSFK KFGTPNQENDPEK
Sbjct: 1  MDVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTPNQENDPEK 53

[Close]

BLAST of Tan0010694 vs. NCBI nr
Match: XP_022962147.1 (uncharacterized protein LOC111462684 [Cucurbita moschata] >XP_023534763.1 uncharacterized protein LOC111796233 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 105.1 bits (261), Expect = 1.8e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M+VKNLLKDKKFWFASFLIAWAAALQGHMMWLQ+QDSFK KFGT +QENDPEK
Sbjct: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

[Close]

BLAST of Tan0010694 vs. NCBI nr
Match: XP_022990508.1 (uncharacterized protein LOC111487347 [Cucurbita maxima])

HSP 1 Score: 104.8 bits (260), Expect = 2.4e-19
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M++KNLLKDKKFWFASFLIAWAAALQGHMMWLQ+QDSFK KFGT +QENDPEK
Sbjct: 1  MEIKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

[Close]

BLAST of Tan0010694 vs. NCBI nr
Match: XP_008463489.1 (PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >XP_016903048.1 PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >TYK05785.1 putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 9.1e-19
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M+ KNLLKDKKFWFASFLIAWAAALQGHMM+LQKQDSFK KFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

[Close]

BLAST of Tan0010694 vs. NCBI nr
Match: XP_031742184.1 (uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742185.1 uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742186.1 uncharacterized protein LOC101219597 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 1.2e-18
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M+ KNLLKDKKFWFASFLIAWAAALQGHMM+LQKQDSFK KFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDNEK 53

[Close]

BLAST of Tan0010694 vs. ExPASy TrEMBL
Match: A0A6J1BYL0 (uncharacterized protein LOC111006648 OS=Momordica charantia OX=3673 GN=LOC111006648 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-21
Identity = 50/53 (94.34%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M VKNLLKDKKFWFASFLIAWAAALQGHMMWLQ+QDSFK KFGTPNQENDPEK
Sbjct: 1  MDVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTPNQENDPEK 53

[Close]

BLAST of Tan0010694 vs. ExPASy TrEMBL
Match: A0A6J1HBY0 (uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC111462684 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.9e-20
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M+VKNLLKDKKFWFASFLIAWAAALQGHMMWLQ+QDSFK KFGT +QENDPEK
Sbjct: 1  MEVKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

[Close]

BLAST of Tan0010694 vs. ExPASy TrEMBL
Match: A0A6J1JTH2 (uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 47/53 (88.68%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M++KNLLKDKKFWFASFLIAWAAALQGHMMWLQ+QDSFK KFGT +QENDPEK
Sbjct: 1  MEIKNLLKDKKFWFASFLIAWAAALQGHMMWLQRQDSFKQKFGTSDQENDPEK 53

[Close]

BLAST of Tan0010694 vs. ExPASy TrEMBL
Match: A0A1S3CJC2 (uncharacterized protein LOC103501645 OS=Cucumis melo OX=3656 GN=LOC103501645 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-19
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M+ KNLLKDKKFWFASFLIAWAAALQGHMM+LQKQDSFK KFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

[Close]

BLAST of Tan0010694 vs. ExPASy TrEMBL
Match: A0A5D3C322 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002860 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.4e-19
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MQVKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQENDPEK 54
          M+ KNLLKDKKFWFASFLIAWAAALQGHMM+LQKQDSFK KFGTPNQEND EK
Sbjct: 1  MEFKNLLKDKKFWFASFLIAWAAALQGHMMYLQKQDSFKQKFGTPNQENDTEK 53

[Close]

BLAST of Tan0010694 vs. TAIR 10
Match: AT2G39500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 3.8e-15
Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 0


Query: 3  VKNLLKDKKFWFASFLIAWAAALQGHMMWLQKQDSFKHKFGTPNQEN 50
          VK ++KDK+FW ASF+I WAA LQGHMMWLQKQ+SFK KFGT ++++
Sbjct: 7  VKTIVKDKRFWIASFIIVWAAGLQGHMMWLQKQESFKQKFGTIDEDD 53

The following BLAST results are available for this feature:

BLAST of Tan0010694 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010694 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134369.1	9.7e-21	94.34	uncharacterized protein LOC111006648 [Momordica charantia]	[more]
XP_022962147.1	1.8e-19	90.57	uncharacterized protein LOC111462684 [Cucurbita moschata] >XP_023534763.1 unchar...	[more]
XP_022990508.1	2.4e-19	88.68	uncharacterized protein LOC111487347 [Cucurbita maxima]	[more]
XP_008463489.1	9.1e-19	90.57	PREDICTED: uncharacterized protein LOC103501645 [Cucumis melo] >XP_016903048.1 P...	[more]
XP_031742184.1	1.2e-18	90.57	uncharacterized protein LOC101219597 [Cucumis sativus] >XP_031742185.1 uncharact...	[more]

BLAST of Tan0010694 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYL0	4.7e-21	94.34	uncharacterized protein LOC111006648 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1HBY0	8.9e-20	90.57	uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC1114626...	[more]
A0A6J1JTH2	1.2e-19	88.68	uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347...	[more]
A0A1S3CJC2	4.4e-19	90.57	uncharacterized protein LOC103501645 OS=Cucumis melo OX=3656 GN=LOC103501645 PE=...	[more]
A0A5D3C322	4.4e-19	90.57	Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Tan0010694 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39500.1	3.8e-15	68.09	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48183	PROTEIN, PUTATIVE-RELATED	coord: 2..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010694.1	Tan0010694.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane