Tan0010652 (gene) Snake gourd v1

Overview


Name	Tan0010652
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	WD repeat-containing protein 91-like protein
Location	LG07: 7969329 .. 7971072 (+)
RNA-Seq Expression	Tan0010652
Synteny	Tan0010652

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTGCAGAGCTGAAGAGGCAGTTTGATGACTTGAAGGTTCTTGCTGGGAACCAAGAGCCGACACTGCGTTTCTATGAGACTAGAGCCCAAAATGTAGCTATTGCCTTCCTTATCTGGGAGCGATTCTTCATCTTTGGTATGTCTCACACTTCTTCCTCCCTCTCCCTCAATTGCACTCATTGGTGGGTCGTTTTGGGTTTGAGTCTTTCCTCTACCTCTCTCTACTTTTTGTTTTTCCTTGAGGCTGTCTTCATGTTGTTTCGGGCTCAGAACCGATTGGACGTCATTTCCAAGAAACAGATCCATATCTCCCAACAGATTTTGAATGCTAGAAATCACCTAAATGATGCTGATTTTTCGATGGAGGCTGGAGATCATTCAATTTCAAGTGATGGGTTCGAGTTCAATTTCCACGTCCAGGTACTTGAGTACCATCCATATACAATTGTCCAGAGGAAACTTTATATTGCCTCCACACTCTCTGCTATGATTGCTGTTACTGCTTTTGAACTATATATGTGTAAGTATTCGTTGTGCAACTGAACTGGACATCGTTTTCAAGTAGGGTTTTGGAAAAGGATTCGAGGTAATCGAGTCCCGATATGTATGTTTATGTTTATGTTATTAAGGGTCTTCGAAAAGGATTTGAGGTAATCGAGCCCCAGGATAAAGAGATGTTGTGTTTATGTTATTGAGGATCTTGGGTTTGTTTTCTGCTTCATATGATTGATAAATACCTGTATATCTAGTCAAGACATTATAAAGGGTCTTGGATTTGTTTTCTGCTTCGTATGATTGAAAGAATATATCTACACATATGTGCACCGAGCTTTCCCTTTTCATCCTCTGCATCTCAACTACTTGTGAATAGATTGAGTCGACTACGAGAATGTTAATAGAAGGAATAAAATTGCTCTTTTAATCACATTCTCAATATCCCTTTCGCTTATGGACTTGAAAATTAACGCAAGGTTGTCACCATTAATTTCCCTTTTTATTGACAAGAAAAAATGAGGGAGGGATCAAACAAAAGCCCTCTAGTAATCTACAAGAGCCTACAATCAAAATTAATAGGGAAGATTGAATACAACTTGTGTAGAGTATTCAAATACAACTTGTGAAGAGTATTCCATCTTGAGGCTATGAACTGAACTAGATCGCAAAACAACTCTAAGGAATTAGTCTAACTTACGAATATTCTCACGTTACCCTTTTAGAGAAGCCAATTGAGAGCTCTAAAGGGATTTAACCAAAGGATTTTTGGTTTATCCTAGCTCTACTGCCTAGTGCCTAAAAGGATTTCAAGAAGCCAATATTCCCACTTACTTGGACAGTGGCTCATAATAGAGGGTAAATCTTTGGGAATATTATATAGTTCTTTCGGTCTCCCGGTCTCTCCTCACTTCCAGTAATATTCTCTACTGACGGCTAAGTCCATCCTGGTTACAAGTGGGCTTTAAGTACTCTTCCCCTTCACTCTCCTTTTTTTGATTCACATATATAACCAGTGTTAGTTGAGATGGTTTTAGTTTGATTAATGGAGTTTTCCAAATTTCATATTGTTTCATACACAAACAACTTCCAGATAAAAACCTGGTCTAAAATTCACAAATTTTATACTAAAATTTGCTCATTATTTGATTCAATGCACTCAATCCTGCATTTTTTTTTAATCTTTTAGGAATAGATGCTACACTTGTTGGATTGGATGCTGGTAAATATGCTTTGGATGAATTAA

mRNA sequence

ATGGAGTTTGCAGAGCTGAAGAGGCAGTTTGATGACTTGAAGGTTCTTGCTGGGAACCAAGAGCCGACACTGCGTTTCTATGAGACTAGAGCCCAAAATGTAGCTATTGCCTTCCTTATCTGGGAGCGATTCTTCATCTTTGGTATGTCTCACACTTCTTCCTCCCTCTCCCTCAATTGCACTCATTGGTGGGTCGTTTTGGGTTTGAGTCTTTCCTCTACCTCTCTCTACTTTTTGTTTTTCCTTGAGGCTGTCTTCATGTTGTTTCGGGCTCAGAACCGATTGGACGTCATTTCCAAGAAACAGATCCATATCTCCCAACAGATTTTGAATGCTAGAAATCACCTAAATGATGCTGATTTTTCGATGGAGGCTGGAGATCATTCAATTTCAAGTGATGGGTTCGAGTTCAATTTCCACATGCTACACTTGTTGGATTGGATGCTGGTAAATATGCTTTGGATGAATTAA

Coding sequence (CDS)

ATGGAGTTTGCAGAGCTGAAGAGGCAGTTTGATGACTTGAAGGTTCTTGCTGGGAACCAAGAGCCGACACTGCGTTTCTATGAGACTAGAGCCCAAAATGTAGCTATTGCCTTCCTTATCTGGGAGCGATTCTTCATCTTTGGTATGTCTCACACTTCTTCCTCCCTCTCCCTCAATTGCACTCATTGGTGGGTCGTTTTGGGTTTGAGTCTTTCCTCTACCTCTCTCTACTTTTTGTTTTTCCTTGAGGCTGTCTTCATGTTGTTTCGGGCTCAGAACCGATTGGACGTCATTTCCAAGAAACAGATCCATATCTCCCAACAGATTTTGAATGCTAGAAATCACCTAAATGATGCTGATTTTTCGATGGAGGCTGGAGATCATTCAATTTCAAGTGATGGGTTCGAGTTCAATTTCCACATGCTACACTTGTTGGATTGGATGCTGGTAAATATGCTTTGGATGAATTAA

Protein sequence

MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLSLNCTHWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLNDADFSMEAGDHSISSDGFEFNFHMLHLLDWMLVNMLWMN

Homology

[Close]

BLAST of Tan0010652 vs. NCBI nr
Match: XP_008437551.1 (PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 107/159 (67.30%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           ME  ELKR FD LK+LA  QE  +R+YETRAQNVAIA LIW+R F+ GM HTSSSLS LN
Sbjct: 3   MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+VLG SL+STSLY LFFLEAVFML+RAQN+LD+ISKKQI IS QILN  +  +D
Sbjct: 63  CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD--GFEFNFH--MLHLLDWMLVNML 154
                EAGD + SSD  G E +F   MLHLLDWM VNML
Sbjct: 123 -----EAGD-TFSSDNGGLELSFQEWMLHLLDWMPVNML 155

[Close]

BLAST of Tan0010652 vs. NCBI nr
Match: XP_011654636.1 (uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetical protein Csa_000251 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40
Identity = 107/159 (67.30%), Postives = 118/159 (74.21%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           MEF ELKR+FD LK LA  QE  +R+YETRAQN+AIA LIW+R F  GM HTSSSLS LN
Sbjct: 3   MEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+V    LSSTSLYFLFFLEAVFML+RAQN+LD+ISKKQI IS QILN  +  +D
Sbjct: 63  CTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSDG----FEFNFHMLHLLDWMLVNML 154
                EAGD SISSD       F   MLHLLDWMLVNML
Sbjct: 123 -----EAGD-SISSDNGWLELSFQEWMLHLLDWMLVNML 155

[Close]

BLAST of Tan0010652 vs. NCBI nr
Match: ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 159.1 bits (401), Expect = 3.2e-35
Identity = 95/145 (65.52%), Postives = 110/145 (75.86%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           ME  ELKR FD LK+LA  QE  +R+YETRAQNVAIA LIW+R F+ GM HTSSSLS LN
Sbjct: 3   MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+VLG SL+STSLY LFFLEAVFML+RAQN+LD+ISKKQI IS QILN  +  +D
Sbjct: 63  CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD--GFEFNFHM 142
                EAGD + SSD  G E +F +
Sbjct: 123 -----EAGD-TFSSDNGGLELSFQV 141

[Close]

BLAST of Tan0010652 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])

HSP 1 Score: 155.6 bits (392), Expect = 3.5e-34
Identity = 81/141 (57.45%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLSLNC 60
           MEF ELKR F+ LK L   QE  ++++E+RAQN+ +A+LIW R F F +S TSSSL L C
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSL-LKC 60

Query: 61  THWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLNDAD 120
             WW+VLGLS+S   +YFLFFLEAV ML+R Q+++D+I K+Q  I QQIL AR+ L+D D
Sbjct: 61  IDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD 120

Query: 121 FSMEAGDHSISSDGFEFNFHM 142
            +MEAGD   SSDGF+F+FH+
Sbjct: 121 LAMEAGD---SSDGFQFSFHV 137

[Close]

BLAST of Tan0010652 vs. NCBI nr
Match: KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-33
Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           M+   LKR FD LK+LA  QE  +R+YETRAQNVAIA LIW+R F+ GM HTSSSLS LN
Sbjct: 3   MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+VLG SL+STSLY LFFLEAVFML+RAQN+LD+ISK+QI IS QILN  +  +D
Sbjct: 63  CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD--GFEFNFHM 142
                EAGD + SSD  G E +F +
Sbjct: 123 -----EAGD-TFSSDNGGLELSFQV 141

[Close]

BLAST of Tan0010652 vs. ExPASy TrEMBL
Match: A0A1S3ATY9 (uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 7.1e-41
Identity = 107/159 (67.30%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           ME  ELKR FD LK+LA  QE  +R+YETRAQNVAIA LIW+R F+ GM HTSSSLS LN
Sbjct: 3   MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+VLG SL+STSLY LFFLEAVFML+RAQN+LD+ISKKQI IS QILN  +  +D
Sbjct: 63  CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD--GFEFNFH--MLHLLDWMLVNML 154
                EAGD + SSD  G E +F   MLHLLDWM VNML
Sbjct: 123 -----EAGD-TFSSDNGGLELSFQEWMLHLLDWMPVNML 155

[Close]

BLAST of Tan0010652 vs. ExPASy TrEMBL
Match: E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35
Identity = 95/145 (65.52%), Postives = 110/145 (75.86%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           ME  ELKR FD LK+LA  QE  +R+YETRAQNVAIA LIW+R F+ GM HTSSSLS LN
Sbjct: 3   MELGELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+VLG SL+STSLY LFFLEAVFML+RAQN+LD+ISKKQI IS QILN  +  +D
Sbjct: 63  CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD--GFEFNFHM 142
                EAGD + SSD  G E +F +
Sbjct: 123 -----EAGD-TFSSDNGGLELSFQV 141

[Close]

BLAST of Tan0010652 vs. ExPASy TrEMBL
Match: A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.4e-35
Identity = 93/135 (68.89%), Postives = 104/135 (77.04%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           MEF ELKR+FD LK LA  QE  +R+YETRAQN+AIA LIW+R F  GM HTSSSLS LN
Sbjct: 3   MEFGELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+V    LSSTSLYFLFFLEAVFML+RAQN+LD+ISKKQI IS QILN  +  +D
Sbjct: 63  CTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD 134
                EAGD SISSD
Sbjct: 123 -----EAGD-SISSD 131

[Close]

BLAST of Tan0010652 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 81/141 (57.45%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLSLNC 60
           MEF ELKR F+ LK L   QE  ++++E+RAQN+ +A+LIW R F F +S TSSSL L C
Sbjct: 1   MEFGELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTSSSL-LKC 60

Query: 61  THWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLNDAD 120
             WW+VLGLS+S   +YFLFFLEAV ML+R Q+++D+I K+Q  I QQIL AR+ L+D D
Sbjct: 61  IDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD 120

Query: 121 FSMEAGDHSISSDGFEFNFHM 142
            +MEAGD   SSDGF+F+FH+
Sbjct: 121 LAMEAGD---SSDGFQFSFHV 137

[Close]

BLAST of Tan0010652 vs. ExPASy TrEMBL
Match: A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.9e-34
Identity = 92/145 (63.45%), Postives = 109/145 (75.17%), Query Frame = 0


Query: 1   MEFAELKRQFDDLKVLAGNQEPTLRFYETRAQNVAIAFLIWERFFIFGMSHTSSSLS-LN 60
           M+   LKR FD LK+LA  QE  +R+YETRAQNVAIA LIW+R F+ GM HTSSSLS LN
Sbjct: 3   MDLGVLKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLN 62

Query: 61  CT-HWWVVLGLSLSSTSLYFLFFLEAVFMLFRAQNRLDVISKKQIHISQQILNARNHLND 120
           CT H W+VLG SL+STSLY LFFLEAVFML+RAQN+LD+ISK+QI IS QILN  +  +D
Sbjct: 63  CTPHLWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILNTGSPNDD 122

Query: 121 ADFSMEAGDHSISSD--GFEFNFHM 142
                EAGD + SSD  G E +F +
Sbjct: 123 -----EAGD-TFSSDNGGLELSFQV 141

The following BLAST results are available for this feature:

BLAST of Tan0010652 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010652 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437551.1	1.5e-40	67.30	PREDICTED: uncharacterized protein LOC103482931 [Cucumis melo]	[more]
XP_011654636.1	1.5e-40	67.30	uncharacterized protein LOC105435427 [Cucumis sativus] >KAE8647813.1 hypothetica...	[more]
ADN33782.1	3.2e-35	65.52	hypothetical protein [Cucumis melo subsp. melo]	[more]
XP_022157130.1	3.5e-34	57.45	uncharacterized protein LOC111023927 [Momordica charantia]	[more]
KAA0042580.1	1.0e-33	63.45	WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598...	[more]

BLAST of Tan0010652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATY9	7.1e-41	67.30	uncharacterized protein LOC103482931 OS=Cucumis melo OX=3656 GN=LOC103482931 PE=...	[more]
E5GBE1	1.5e-35	65.52	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KM15	4.4e-35	68.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1	[more]
A0A6J1DS87	1.7e-34	57.45	uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5A7TGW8	4.9e-34	63.45	WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of Tan0010652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33287:SF8	SUBFAMILY NOT NAMED	coord: 2..129
None	No IPR available	PANTHER	PTHR33287	OS03G0453550 PROTEIN	coord: 2..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010652.1	Tan0010652.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane