Tan0010530 (gene) Snake gourd v1

Overview


Name	Tan0010530
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Non-specific lipid-transfer protein
Location	LG08: 73882237 .. 73883774 (+)
RNA-Seq Expression	Tan0010530
Synteny	Tan0010530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAAGACAAAAAGGAAAAATTTTAATAATCTATCTAATTAGAGAATTGGATCATGGAGAGGAATATGAAAATGAAGATGATTGCAGTTGTAGGGATTGTGATGATTGTAGGGATGGCGGTGGGTGAAGCAGCGGCTCTGCCATGTGGCTCAGTGGCTCACGCATTAGCCCCTTGCTTGCCATATTTGAGATCAGCTGGCCCTCTCATCGGAGCGTGTTGCTATGGTGTTACGTTCATCAACAGCCATGCTTCCACCACTGCCGATCGCCGCGCCACTTGCTCCTGCTTGAAGAGGCTGGCTGATGCTAGCACCGGCATCAAACCTGGCCTCGCCGCTGGCCTTCTCTCCAAATGTCACGTCAGCGTTCCTTACAAGATCAGCCCCTACACCGACTGCAACAAGTATATATATTTCTATCCCTTATTATTATCAGAGCATTTGATATAATTAAATTTAGGTTAAATTACAACTTTAATTCTTTGATTTTTTTCATTTTTATTTTTGAAAATTATGTCTTTTCATAATTTCTCATATTTTAATCTACCGTAATTCATCTCTTACGTAAAGTAGCATTTAAGCATATAATCAAATTTCAAAATTAAAAATAAGTTTTTGAAAACTACCTTTTAAAACGGGATCTAAACTCTCATATCTGTATCTATTTCATTCTTGAACTTTAAAAAGTTTCTAATGTTTCTAAACTTTTAGTATAATATCTAATAGATCCTTAAACTTTATAAATGTCAGTAAATCATCTAATTTTTAATTTTATATCTAATAACTCTCTAATATTTTTAAAAATTAATTGATCTATTTGATATATAATTGAATTTTATGTCTAACTTCATGTGACTAGTAAATTCGTAAAATTTTAAAAAATATGAAATTATTCACACAATTGAAAGTTCATGGACCCATTGAACTCTTAAAATTAAAAGTTTAAACATTTATCAGAACCTTTTTAAAAAAGGACCAAATAGATGCAAATTATATGGACGTTCAAAAACCTAGCTATTAGACATTTTTCAAAATTCAGTAACCGAATAGATACATATTTAAAAGTTCATAGACTAAACTTGTAATTTAACCATAAATTTACAATAACTCGTTTGCTTAATTAAGCTTTTAGGTTGACGTGTGATTCAACAACAATCCTTTTAGTTGGGAGCTTTTTCATACTTCTTAATTCGTTTCTCATTTATCCCTTCAATCTCACCGTTGCAGAATCAATTGAGGACGATCTCATCAGCTACTCTACTACTACCCATTTGCCAGTCAACACATCTCATCTTATATATTCTCTTCTTCTCCAGTTTGGTTCGCTGCATGTTTGTTAGCCTATATTATTAAATGTTTGTTAGCTTATATTATTAAATTTACTCTAAATTATCAATTTAAGCTTTTAGTTTGATTGGTGATTTAAGAAAGCTTTTAATTTGATTGGTGATTTAAGAATGTTGATCACAGTGTATTTTATTTTGCTTATGTGTGTAACGAGTATGAGATTTCAAATCCAATATATTATATATTCTTC

mRNA sequence

AAGAAAAGACAAAAAGGAAAAATTTTAATAATCTATCTAATTAGAGAATTGGATCATGGAGAGGAATATGAAAATGAAGATGATTGCAGTTGTAGGGATTGTGATGATTGTAGGGATGGCGGTGGGTGAAGCAGCGGCTCTGCCATGTGGCTCAGTGGCTCACGCATTAGCCCCTTGCTTGCCATATTTGAGATCAGCTGGCCCTCTCATCGGAGCGTGTTGCTATGGTGTTACGTTCATCAACAGCCATGCTTCCACCACTGCCGATCGCCGCGCCACTTGCTCCTGCTTGAAGAGGCTGGCTGATGCTAGCACCGGCATCAAACCTGGCCTCGCCGCTGGCCTTCTCTCCAAATGTCACGTCAGCGTTCCTTACAAGATCAGCCCCTACACCGACTGCAACAAAATCAATTGAGGACGATCTCATCAGCTACTCTACTACTACCCATTTGCCAGTCAACACATCTCATCTTATATATTCTCTTCTTCTCCAGTTTGGTTCGCTGCATGTTTGTTAGCCTATATTATTAAATGTTTGTTAGCTTATATTATTAAATTTACTCTAAATTATCAATTTAAGCTTTTAGTTTGATTGGTGATTTAAGAAAGCTTTTAATTTGATTGGTGATTTAAGAATGTTGATCACAGTGTATTTTATTTTGCTTATGTGTGTAACGAGTATGAGATTTCAAATCCAATATATTATATATTCTTC

Coding sequence (CDS)

ATGGAGAGGAATATGAAAATGAAGATGATTGCAGTTGTAGGGATTGTGATGATTGTAGGGATGGCGGTGGGTGAAGCAGCGGCTCTGCCATGTGGCTCAGTGGCTCACGCATTAGCCCCTTGCTTGCCATATTTGAGATCAGCTGGCCCTCTCATCGGAGCGTGTTGCTATGGTGTTACGTTCATCAACAGCCATGCTTCCACCACTGCCGATCGCCGCGCCACTTGCTCCTGCTTGAAGAGGCTGGCTGATGCTAGCACCGGCATCAAACCTGGCCTCGCCGCTGGCCTTCTCTCCAAATGTCACGTCAGCGTTCCTTACAAGATCAGCCCCTACACCGACTGCAACAAAATCAATTGA

Protein sequence

MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKIN

Homology

[Close]

BLAST of Tan0010530 vs. ExPASy Swiss-Prot
Match: P85105 (Non-specific lipid-transfer protein P5 OS=Vitis sp. OX=3604 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-21
Identity = 50/91 (54.95%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 29  LPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRATCSCLKRLADASTG 88
           L CG VA  LAPC+ YLRSAGPL  ACC GV  + + A+TT DRR  C CL   + + +G
Sbjct: 1   LSCGDVATQLAPCINYLRSAGPLPVACCNGVKNLKNSAATTQDRRTACKCLINASKSISG 60

Query: 89  IKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
           +  GLAAGL  KC V++PYKISP T+C+++N
Sbjct: 61  VNFGLAAGLPGKCGVNIPYKISPSTNCDQVN 91

[Close]

BLAST of Tan0010530 vs. ExPASy Swiss-Prot
Match: P19656 (Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.8e-21
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 1   MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLR--SAGPLIGACCYG 60
           M R  ++ ++A   + +++  A    AA+ CG VA A+APC+ Y R   +GP  G CC G
Sbjct: 1   MARTQQLAVVATAVVALVLLAAATSEAAISCGQVASAIAPCISYARGQGSGPSAG-CCSG 60

Query: 61  VTFINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 120
           V  +N+ A TTADRRA C+CLK  A   +G+  G AA + SKC VS+PY IS  TDC+++
Sbjct: 61  VRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 120

[Close]

BLAST of Tan0010530 vs. ExPASy Swiss-Prot
Match: Q9M5X7 (Non-specific lipid-transfer protein OS=Malus domestica OX=3750 GN=MALD3 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-20
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 5   MKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINS 64
           M    +  + +V+ + MAV  A A+ CG V  +LAPC+ Y+RS G +  ACC G+  IN 
Sbjct: 1   MASSAVTKLALVVALCMAVSVAHAITCGQVTSSLAPCIGYVRSGGAVPPACCNGIRTING 60

Query: 65  HASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDC 116
            A TTADR+  C+CLK LA + +G+ P  AAGL  KC V+VPYKIS  T+C
Sbjct: 61  LARTTADRQTACNCLKNLAGSISGVNPNNAAGLPGKCGVNVPYKISTSTNC 111

[Close]

BLAST of Tan0010530 vs. ExPASy Swiss-Prot
Match: P80273 (Non-specific lipid-transfer protein P3 OS=Vitis sp. OX=3604 PE=1 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-20
Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 0


Query: 29  LPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRATCSCLKRLADASTG 88
           L CG VA  +A C+ YLR AGPL  ACC GV  + + A+TT DRR  C CL   +   +G
Sbjct: 1   LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISG 60

Query: 89  IKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
           +  GLAAGL +KC VS+PYKISP T+C+++N
Sbjct: 61  VNFGLAAGLPAKCGVSIPYKISPSTNCDQVN 91

[Close]

BLAST of Tan0010530 vs. ExPASy Swiss-Prot
Match: Q42952 (Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum OX=4097 GN=LTP1 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-20
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0


Query: 15  IVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRA 74
           +V+ + +A   A A+ CG V   LAPCL YLR+ GPL G CC GV  + + A TT DR+ 
Sbjct: 11  VVLCMVVAAPCAEAITCGQVTSNLAPCLAYLRNTGPL-GRCCGGVKALVNSARTTEDRQI 70

Query: 75  TCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            C+CLK  A A +GI  G AAGL S C V++PYKISP TDC+K+
Sbjct: 71  ACTCLKSAAGAISGINLGKAAGLPSTCGVNIPYKISPSTDCSKV 113

[Close]

BLAST of Tan0010530 vs. NCBI nr
Match: XP_022157263.1 (non-specific lipid-transfer protein 1-like [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 3.3e-24
Identity = 61/118 (51.69%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 1   MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVT 60
           ME + KM ++A+  ++++VG  V + A + CG+V+ A+APC+PYLR+ GP+   CC GV 
Sbjct: 1   MEMSRKMMIVAMAMVLLVVGSPVAD-AVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVK 60

Query: 61  FINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            +NS ASTTADR+A C CLK  A A  G+  GLAAGL S C V++PYKISP TDC ++
Sbjct: 61  ALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQV 117

[Close]

BLAST of Tan0010530 vs. NCBI nr
Match: XP_022982607.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-23
Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGP-LIGACCYGV 60
           MER+MKM +  VVG+V++  M VGE AA+ CG+VA ++APC+PYLR+    L  ACC G+
Sbjct: 1   MERSMKMAI--VVGVVLMC-MVVGE-AAISCGTVASSVAPCIPYLRNPSTGLPAACCSGI 60

Query: 61  TFINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
             +NS AST+ADRR  C+CLK  A++ +GI    A+ L SKC VS+PYKISP TDCNK+N
Sbjct: 61  RSLNSQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Tan0010530 vs. NCBI nr
Match: XP_022157264.1 (non-specific lipid-transfer protein 1-like [Momordica charantia])

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-22
Identity = 68/115 (59.13%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 5   MKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINS 64
           M  KM+ V G+VM + M VG  AA+ CGSV  A+APC+ YLR  G L  ACC GV  +NS
Sbjct: 3   MSRKMMIVAGMVM-MWMVVG-GAAISCGSVNGAVAPCISYLRPGGVLSPACCSGVKNLNS 62

Query: 65  HASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
            ASTTADR+A C CLK  A A  GI  G AAGL  KC VSVPYKISP TDC+K++
Sbjct: 63  QASTTADRQAVCQCLKSAAGAIQGIDLGRAAGLPGKCGVSVPYKISPSTDCSKVH 115

[Close]

BLAST of Tan0010530 vs. NCBI nr
Match: WP_136770554.1 (non-specific lipid-transfer protein, partial [Bacillus paralicheniformis] >TJW23197.1 hypothetical protein E7L52_22455, partial [Bacillus paralicheniformis])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 62/118 (52.54%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 1   MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVT 60
           M R M MK++ VV   ++V  A   A A+ CG V  +L PCLPYLR+AG L  ACC GV 
Sbjct: 3   MARTMMMKVLCVVVACLVV--AAPHAEAITCGQVVQSLLPCLPYLRNAGALSPACCNGVR 62

Query: 61  FINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            +N  A + ADRR TC C+K    A++GI  G AAGL  KC VS+PYKISP TDC+K+
Sbjct: 63  SLNGAAKSPADRRTTCGCIKNAYAANSGINSGNAAGLPGKCGVSIPYKISPSTDCSKV 118

[Close]

BLAST of Tan0010530 vs. NCBI nr
Match: MBO8630981.1 (non-specific lipid-transfer protein [Staphylococcus aureus])

HSP 1 Score: 114.4 bits (285), Expect = 6.8e-22
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 27  AALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRATCSCLKRLADAS 86
           AA+ CG+V  +LAPC+PYLRS G L  ACC GV+ +NS A TT DR+  C CLK   ++ 
Sbjct: 15  AAISCGTVTSSLAPCIPYLRSGGALPPACCKGVSSLNSSAKTTPDRQTACGCLKNAYNSI 74

Query: 87  TGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            GI+P LAAGL  KC VS+PYKISP TDC+K+
Sbjct: 75  KGIQPALAAGLPGKCGVSIPYKISPTTDCSKV 106

[Close]

BLAST of Tan0010530 vs. ExPASy TrEMBL
Match: A0A6J1DSX2 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111024013 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24
Identity = 61/118 (51.69%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 1   MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVT 60
           ME + KM ++A+  ++++VG  V + A + CG+V+ A+APC+PYLR+ GP+   CC GV 
Sbjct: 1   MEMSRKMMIVAMAMVLLVVGSPVAD-AVISCGAVSSAMAPCIPYLRNQGPIGAGCCSGVK 60

Query: 61  FINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            +NS ASTTADR+A C CLK  A A  G+  GLAAGL S C V++PYKISP TDC ++
Sbjct: 61  ALNSQASTTADRQAACKCLKTAAAAIPGLNLGLAAGLPSHCGVNIPYKISPSTDCAQV 117

[Close]

BLAST of Tan0010530 vs. ExPASy TrEMBL
Match: A0A6J1IX25 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 7.8e-24
Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 1   MERNMKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGP-LIGACCYGV 60
           MER+MKM +  VVG+V++  M VGE AA+ CG+VA ++APC+PYLR+    L  ACC G+
Sbjct: 1   MERSMKMAI--VVGVVLMC-MVVGE-AAISCGTVASSVAPCIPYLRNPSTGLPAACCSGI 60

Query: 61  TFINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
             +NS AST+ADRR  C+CLK  A++ +GI    A+ L SKC VS+PYKISP TDCNK+N
Sbjct: 61  RSLNSQASTSADRRTACNCLKSAANSVSGINYNAASSLPSKCGVSIPYKISPSTDCNKVN 116

[Close]

BLAST of Tan0010530 vs. ExPASy TrEMBL
Match: A0A6J1DW01 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111024014 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.6e-23
Identity = 68/115 (59.13%), Postives = 79/115 (68.70%), Query Frame = 0


Query: 5   MKMKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINS 64
           M  KM+ V G+VM + M VG  AA+ CGSV  A+APC+ YLR  G L  ACC GV  +NS
Sbjct: 3   MSRKMMIVAGMVM-MWMVVG-GAAISCGSVNGAVAPCISYLRPGGVLSPACCSGVKNLNS 62

Query: 65  HASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
            ASTTADR+A C CLK  A A  GI  G AAGL  KC VSVPYKISP TDC+K++
Sbjct: 63  QASTTADRQAVCQCLKSAAGAIQGIDLGRAAGLPGKCGVSVPYKISPSTDCSKVH 115

[Close]

BLAST of Tan0010530 vs. ExPASy TrEMBL
Match: A0A0A0LF44 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 7.3e-22
Identity = 63/121 (52.07%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 1   MERNMK-MKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSA-GPLIGACCYG 60
           ME  +K + ++ +VGIVM+  +  GEAA + CG VA +++ C+ YLRSA G +   CC G
Sbjct: 1   MEMKLKGLMIVGIVGIVMMCMVVQGEAAGMTCGKVASSVSGCIGYLRSAQGQVPQVCCNG 60

Query: 61  VTFINSHASTTADRRATCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 120
           +  +NS ASTT DRR  C+CLK  A +  GI  G AA L SKC VSVPYKISP TDC K+
Sbjct: 61  IRSLNSQASTTVDRRIACNCLKAAAGSIEGINYGAAASLPSKCGVSVPYKISPSTDCAKV 120

[Close]

BLAST of Tan0010530 vs. ExPASy TrEMBL
Match: A0A3S3MVT0 (Non-specific lipid-transfer protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00911500 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 9.6e-22
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 27  AALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRATCSCLKRLADAS 86
           AA+ CG+V  +LAPC+PYLRS G +  ACC GV+ +NS A TT DR+  C CLK   ++ 
Sbjct: 26  AAITCGTVTSSLAPCIPYLRSGGAVPPACCKGVSSLNSMAKTTPDRQTACGCLKNAYNSI 85

Query: 87  TGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            GI+P LAAGL  KC VS+PYKISP TDC+K+
Sbjct: 86  KGIQPALAAGLPGKCGVSIPYKISPTTDCSKV 117

[Close]

BLAST of Tan0010530 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-19
Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 15  IVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRA 74
           +V+ V +     AA+ CG+VA +LAPC  YL   G +  +CC GV  +NS A TT DR+ 
Sbjct: 11  LVLTVCIVASVDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQ 70

Query: 75  TCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            C C++  A + +G+ P LA+GL  KC VS+PY IS  T+CN I
Sbjct: 71  ACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Tan0010530 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 84.3 bits (207), Expect = 7.0e-17
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 16  VMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRAT 75
           V+ V +     AA+ CG+VA +L+PCL YL   G +   CC GV  +N  A TT DR+  
Sbjct: 12  VLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPPPCCAGVKKLNGMAQTTPDRQQA 71

Query: 76  CSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
           C CL+    A+ G+ P LA+GL  KC VS+PY IS  T+C  I
Sbjct: 72  CRCLQ---SAAKGVNPSLASGLPGKCGVSIPYPISTSTNCATI 111

[Close]

BLAST of Tan0010530 vs. TAIR 10
Match: AT2G38530.1 (lipid transfer protein 2 )

HSP 1 Score: 83.2 bits (204), Expect = 1.6e-16
Identity = 49/113 (43.36%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 7   MKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHA 66
           MK+  +V   MIV   +   A + CG+V   LA C+ YL    PL   CC GVT + + A
Sbjct: 5   MKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMA 64

Query: 67  STTADRRATCSCLKRLADA-STGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
           STT DR+  C CL+  A A   G+    AAGL S C V++PYKIS  T+CN +
Sbjct: 65  STTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTV 117

[Close]

BLAST of Tan0010530 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-16
Identity = 47/113 (41.59%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 7   MKMIAVVGIVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHA 66
           MK+  ++   MIV   +   AAL CGSV   LA C+ Y+   G +  ACC GV  +NS A
Sbjct: 5   MKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIA 64

Query: 67  STTADRRATCSCLKRLADA-STGIKPGLAAGLLSKCHVSVPYKISPYTDCNKI 119
            TT DR+  C+C++  A A  +G+  G AAG+   C V++PYKIS  T+C  +
Sbjct: 65  KTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of Tan0010530 vs. TAIR 10
Match: AT3G51590.1 (lipid transfer protein 12 )

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15
Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 15  IVMIVGMAVGEAAALPCGSVAHALAPCLPYLRSAGPLIGACCYGVTFINSHASTTADRRA 74
           IV+ + MA    + + CG+V   LA CL YL ++GPL   CC GV  +   A TT DR+ 
Sbjct: 12  IVLTIYMASPTESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQ 71

Query: 75  TCSCLKRLADASTGIKPGLAAGLLSKCHVSVPYKISPYTDCNKIN 120
            C CLK       G+   L A L + C VS+PY IS  T+C+ I+
Sbjct: 72  VCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116

The following BLAST results are available for this feature:

BLAST of Tan0010530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85105	1.2e-21	54.95	Non-specific lipid-transfer protein P5 OS=Vitis sp. OX=3604 PE=1 SV=1	[more]
P19656	7.8e-21	44.63	Non-specific lipid-transfer protein OS=Zea mays OX=4577 PE=1 SV=1	[more]
Q9M5X7	1.0e-20	47.75	Non-specific lipid-transfer protein OS=Malus domestica OX=3750 GN=MALD3 PE=1 SV=...	[more]
P80273	1.3e-20	52.75	Non-specific lipid-transfer protein P3 OS=Vitis sp. OX=3604 PE=1 SV=2	[more]
Q42952	1.7e-20	51.92	Non-specific lipid-transfer protein 1 OS=Nicotiana tabacum OX=4097 GN=LTP1 PE=1 ...	[more]

BLAST of Tan0010530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157263.1	3.3e-24	51.69	non-specific lipid-transfer protein 1-like [Momordica charantia]	[more]
XP_022982607.1	1.6e-23	55.83	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
XP_022157264.1	1.4e-22	59.13	non-specific lipid-transfer protein 1-like [Momordica charantia]	[more]
WP_136770554.1	1.8e-22	52.54	non-specific lipid-transfer protein, partial [Bacillus paralicheniformis] >TJW23...	[more]
MBO8630981.1	6.8e-22	58.70	non-specific lipid-transfer protein [Staphylococcus aureus]	[more]

BLAST of Tan0010530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSX2	1.6e-24	51.69	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110240...	[more]
A0A6J1IX25	7.8e-24	55.83	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111481432 ...	[more]
A0A6J1DW01	6.6e-23	59.13	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110240...	[more]
A0A0A0LF44	7.3e-22	52.07	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G728130 P...	[more]
A0A3S3MVT0	9.6e-22	57.61	Non-specific lipid-transfer protein OS=Cinnamomum micranthum f. kanehirae OX=337...	[more]

BLAST of Tan0010530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59320.1	2.6e-19	45.19	lipid transfer protein 3	[more]
AT5G59310.1	7.0e-17	44.66	lipid transfer protein 4	[more]
AT2G38530.1	1.6e-16	43.36	lipid transfer protein 2	[more]
AT2G38540.1	7.8e-16	41.59	lipid transfer protein 1	[more]
AT3G51590.1	1.7e-15	40.95	lipid transfer protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 106..117 score: 56.41 coord: 30..46 score: 49.86 coord: 71..86 score: 43.94 coord: 50..64 score: 36.62 coord: 88..105 score: 43.33
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 3..116
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 31..115 e-value: 1.7E-5 score: 34.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 31..115 e-value: 3.6E-5 score: 24.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 28..119 e-value: 5.8E-26 score: 92.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 30..118
None	No IPR available	PANTHER	PTHR33076:SF76	NON-SPECIFIC LIPID-TRANSFER PROTEIN 1-RELATED	coord: 3..116
None	No IPR available	CDD	cd01960	nsLTP1	coord: 29..116 e-value: 1.01698E-30 score: 103.198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010530.1	Tan0010530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding