Tan0010521 (gene) Snake gourd v1

Overview


Name	Tan0010521
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein indeterminate-domain 2-like
Location	LG06: 7117970 .. 7118326 (+)
RNA-Seq Expression	Tan0010521
Synteny	Tan0010521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACATTCTGATCAACCAGCAGACATGGTAGGGATGAATATGGGAATGTACGGACAGATGATGATGATGAAAGAACAAGATAACTGTAGTAGTAGCAGCTCGAGTTTCGTCGTCCACGAAAAGGGTCAGTGGCGACCGGTATCAAGGTTTTCCGGTGGCGGTGGCGGTGGCGGTAGCGGGGAGAGTCGGATGACGACGCTGGATTTGTTGGGGGAAGGAGGGTGGAGGCTGAGGCAGTTGCAAGAAGATCAAAACCATCATCACCAGCAGCAGATGGTGCCAATTATGAAGCATTTTGAGCTGCAAAACTTTCATGGGGATTCAACTGTTGACAAGCCCATGTTTGAGTTTTGA

mRNA sequence

ATGCCACATTCTGATCAACCAGCAGACATGGTAGGGATGAATATGGGAATGTACGGACAGATGATGATGATGAAAGAACAAGATAACTGTAGTAGTAGCAGCTCGAGTTTCGTCGTCCACGAAAAGGGTCAGTGGCGACCGGTATCAAGGTTTTCCGGTGGCGGTGGCGGTGGCGGTAGCGGGGAGAGTCGGATGACGACGCTGGATTTGTTGGGGGAAGGAGGGTGGAGGCTGAGGCAGTTGCAAGAAGATCAAAACCATCATCACCAGCAGCAGATGGTGCCAATTATGAAGCATTTTGAGCTGCAAAACTTTCATGGGGATTCAACTGTTGACAAGCCCATGTTTGAGTTTTGA

Coding sequence (CDS)

ATGCCACATTCTGATCAACCAGCAGACATGGTAGGGATGAATATGGGAATGTACGGACAGATGATGATGATGAAAGAACAAGATAACTGTAGTAGTAGCAGCTCGAGTTTCGTCGTCCACGAAAAGGGTCAGTGGCGACCGGTATCAAGGTTTTCCGGTGGCGGTGGCGGTGGCGGTAGCGGGGAGAGTCGGATGACGACGCTGGATTTGTTGGGGGAAGGAGGGTGGAGGCTGAGGCAGTTGCAAGAAGATCAAAACCATCATCACCAGCAGCAGATGGTGCCAATTATGAAGCATTTTGAGCTGCAAAACTTTCATGGGGATTCAACTGTTGACAAGCCCATGTTTGAGTTTTGA

Protein sequence

MPHSDQPADMVGMNMGMYGQMMMMKEQDNCSSSSSSFVVHEKGQWRPVSRFSGGGGGGGSGESRMTTLDLLGEGGWRLRQLQEDQNHHHQQQMVPIMKHFELQNFHGDSTVDKPMFEF

Homology

[Close]

BLAST of Tan0010521 vs. NCBI nr
Match: XP_038876751.1 (zinc finger protein GAI-ASSOCIATED FACTOR 1-like [Benincasa hispida])

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39
Identity = 88/118 (74.58%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MPHSDQPADMVGMNMGMYGQMMMMKEQDNCSSSSSSFVVHEKGQWRPVSRFSGGGGGGGS 60
           MPHSDQP DMVGMNM MYG MMMMKEQDNC+S+SSSFVVHEKGQW+P+SRFS   G   S
Sbjct: 380 MPHSDQP-DMVGMNMEMYGHMMMMKEQDNCTSNSSSFVVHEKGQWQPISRFS--SGDNNS 439

Query: 61  GESRMTTLDLLGEGGWRLRQLQEDQNHHHQQQMVPIMKHFELQNFHGDSTVDKPMFEF 119
            ES+M TLDLLGE GWRLRQLQ +++HHH ++M+PIMKHFE+QNFH DS VDK +FEF
Sbjct: 440 KESQMMTLDLLGERGWRLRQLQGNESHHH-EEMMPIMKHFEMQNFHKDSNVDKSIFEF 493

[Close]

BLAST of Tan0010521 vs. NCBI nr
Match: KAA0068031.1 (protein indeterminate-domain 2-like [Cucumis melo var. makuwa] >TYK18097.1 protein indeterminate-domain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 170.6 bits (431), Expect = 7.9e-39
Identity = 90/122 (73.77%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MPHSDQPADMVGMNMGMYGQMMMMKEQD-NCSSSSSSFVVHEKGQWRPVSRFSGGGGGGG 60
           MPHSD   DMVGMNMGMYG MMMMKEQD NCS++SSSFV  EKGQWRP+SRFSGGG G G
Sbjct: 380 MPHSDHQPDMVGMNMGMYGHMMMMKEQDHNCSTNSSSFVGPEKGQWRPISRFSGGGSGSG 439

Query: 61  SGESRMTTLDLLGEGGWRLRQLQEDQ--NHHHQQQMVPIMKHFELQNFHGDST-VDKPMF 119
             E++M TLDLLGE GWRLR LQ D+  +H+HQQ+MVPIMKHFE+Q+FHGDS+ VDK +F
Sbjct: 440 E-ENQMMTLDLLGERGWRLRHLQGDESSHHYHQQEMVPIMKHFEMQSFHGDSSNVDKSIF 499

[Close]

BLAST of Tan0010521 vs. NCBI nr
Match: XP_008451665.1 (PREDICTED: protein indeterminate-domain 2-like [Cucumis melo])

HSP 1 Score: 170.6 bits (431), Expect = 7.9e-39
Identity = 90/122 (73.77%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MPHSDQPADMVGMNMGMYGQMMMMKEQD-NCSSSSSSFVVHEKGQWRPVSRFSGGGGGGG 60
           MPHSD   DMVGMNMGMYG MMMMKEQD NCS++SSSFV  EKGQWRP+SRFSGGG G G
Sbjct: 359 MPHSDHQPDMVGMNMGMYGHMMMMKEQDHNCSTNSSSFVGPEKGQWRPISRFSGGGSGSG 418

Query: 61  SGESRMTTLDLLGEGGWRLRQLQEDQ--NHHHQQQMVPIMKHFELQNFHGDST-VDKPMF 119
             E++M TLDLLGE GWRLR LQ D+  +H+HQQ+MVPIMKHFE+Q+FHGDS+ VDK +F
Sbjct: 419 E-ENQMMTLDLLGERGWRLRHLQGDESSHHYHQQEMVPIMKHFEMQSFHGDSSNVDKSIF 478

[Close]

BLAST of Tan0010521 vs. NCBI nr
Match: XP_022153576.1 (protein indeterminate-domain 2-like [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 1.1e-35
Identity = 88/117 (75.21%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 3   HSDQPADMVGMNMGMYGQMMMMKEQDNCSSSSSSFVVHEKGQWRPVSRFSGGGGGGGSGE 62
           HSDQ  DMVG++MGMYG MM  KEQDNCSSS+SSF+VHEKGQW  VSRFS    G  SGE
Sbjct: 380 HSDQ-QDMVGIDMGMYGHMMTTKEQDNCSSSNSSFLVHEKGQW-SVSRFS---DGDVSGE 439

Query: 63  SRMTTLDLLGEGGWRLRQLQEDQNHHHQQQMVPIMKHFELQNF-HGDSTVDKPMFEF 119
           S M TLDLLGEGGWRLRQLQEDQN HH +Q +PIMKHFELQNF HGD  VDK +FEF
Sbjct: 440 SPMMTLDLLGEGGWRLRQLQEDQNRHHHRQTMPIMKHFELQNFDHGDPNVDKSIFEF 491

[Close]

BLAST of Tan0010521 vs. NCBI nr
Match: KAE8646331.1 (hypothetical protein Csa_015630, partial [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 2.2e-33
Identity = 89/127 (70.08%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MPHSDQPADMVGM-NMGMYGQMMMMKEQD-NCS-SSSSSFVVHEKGQWRPVSRFSGGGGG 60
           M HSDQP DMVGM NMGMYG MMMMKEQD NCS ++SSSFVV EKGQWR +SRFSGGG G
Sbjct: 40  MAHSDQPVDMVGMNNMGMYGHMMMMKEQDHNCSNNNSSSFVVPEKGQWRRISRFSGGGSG 99

Query: 61  GGSGESRMTTLDLLGEGGWRLRQLQED--QNHHH--QQQMVPIMKHF-ELQNFHGDST-V 119
            G    +M TLDLLGE GWRLR LQ D   +HH+  QQ+MVPIMKHF ++QNFHGDS+ V
Sbjct: 100 SGEENHQMMTLDLLGERGWRLRHLQGDHESSHHYQGQQEMVPIMKHFDQMQNFHGDSSNV 159

[Close]

BLAST of Tan0010521 vs. ExPASy TrEMBL
Match: A0A5D3D2F3 (Protein indeterminate-domain 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00180 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 90/122 (73.77%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MPHSDQPADMVGMNMGMYGQMMMMKEQD-NCSSSSSSFVVHEKGQWRPVSRFSGGGGGGG 60
           MPHSD   DMVGMNMGMYG MMMMKEQD NCS++SSSFV  EKGQWRP+SRFSGGG G G
Sbjct: 380 MPHSDHQPDMVGMNMGMYGHMMMMKEQDHNCSTNSSSFVGPEKGQWRPISRFSGGGSGSG 439

Query: 61  SGESRMTTLDLLGEGGWRLRQLQEDQ--NHHHQQQMVPIMKHFELQNFHGDST-VDKPMF 119
             E++M TLDLLGE GWRLR LQ D+  +H+HQQ+MVPIMKHFE+Q+FHGDS+ VDK +F
Sbjct: 440 E-ENQMMTLDLLGERGWRLRHLQGDESSHHYHQQEMVPIMKHFEMQSFHGDSSNVDKSIF 499

[Close]

BLAST of Tan0010521 vs. ExPASy TrEMBL
Match: A0A1S3BT63 (protein indeterminate-domain 2-like OS=Cucumis melo OX=3656 GN=LOC103492898 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.8e-39
Identity = 90/122 (73.77%), Postives = 103/122 (84.43%), Query Frame = 0


Query: 1   MPHSDQPADMVGMNMGMYGQMMMMKEQD-NCSSSSSSFVVHEKGQWRPVSRFSGGGGGGG 60
           MPHSD   DMVGMNMGMYG MMMMKEQD NCS++SSSFV  EKGQWRP+SRFSGGG G G
Sbjct: 359 MPHSDHQPDMVGMNMGMYGHMMMMKEQDHNCSTNSSSFVGPEKGQWRPISRFSGGGSGSG 418

Query: 61  SGESRMTTLDLLGEGGWRLRQLQEDQ--NHHHQQQMVPIMKHFELQNFHGDST-VDKPMF 119
             E++M TLDLLGE GWRLR LQ D+  +H+HQQ+MVPIMKHFE+Q+FHGDS+ VDK +F
Sbjct: 419 E-ENQMMTLDLLGERGWRLRHLQGDESSHHYHQQEMVPIMKHFEMQSFHGDSSNVDKSIF 478

[Close]

BLAST of Tan0010521 vs. ExPASy TrEMBL
Match: A0A6J1DL17 (protein indeterminate-domain 2-like OS=Momordica charantia OX=3673 GN=LOC111021044 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.2e-36
Identity = 88/117 (75.21%), Postives = 95/117 (81.20%), Query Frame = 0


Query: 3   HSDQPADMVGMNMGMYGQMMMMKEQDNCSSSSSSFVVHEKGQWRPVSRFSGGGGGGGSGE 62
           HSDQ  DMVG++MGMYG MM  KEQDNCSSS+SSF+VHEKGQW  VSRFS    G  SGE
Sbjct: 380 HSDQ-QDMVGIDMGMYGHMMTTKEQDNCSSSNSSFLVHEKGQW-SVSRFS---DGDVSGE 439

Query: 63  SRMTTLDLLGEGGWRLRQLQEDQNHHHQQQMVPIMKHFELQNF-HGDSTVDKPMFEF 119
           S M TLDLLGEGGWRLRQLQEDQN HH +Q +PIMKHFELQNF HGD  VDK +FEF
Sbjct: 440 SPMMTLDLLGEGGWRLRQLQEDQNRHHHRQTMPIMKHFELQNFDHGDPNVDKSIFEF 491

[Close]

BLAST of Tan0010521 vs. ExPASy TrEMBL
Match: A0A0A0K7P2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G395220 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 89/127 (70.08%), Postives = 101/127 (79.53%), Query Frame = 0


Query: 1   MPHSDQPADMVGM-NMGMYGQMMMMKEQD-NCS-SSSSSFVVHEKGQWRPVSRFSGGGGG 60
           M HSDQP DMVGM NMGMYG MMMMKEQD NCS ++SSSFVV EKGQWR +SRFSGGG G
Sbjct: 47  MAHSDQPVDMVGMNNMGMYGHMMMMKEQDHNCSNNNSSSFVVPEKGQWRRISRFSGGGSG 106

Query: 61  GGSGESRMTTLDLLGEGGWRLRQLQED--QNHHH--QQQMVPIMKHF-ELQNFHGDST-V 119
            G    +M TLDLLGE GWRLR LQ D   +HH+  QQ+MVPIMKHF ++QNFHGDS+ V
Sbjct: 107 SGEENHQMMTLDLLGERGWRLRHLQGDHESSHHYQGQQEMVPIMKHFDQMQNFHGDSSNV 166

[Close]

BLAST of Tan0010521 vs. ExPASy TrEMBL
Match: A0A6A2XAE1 (Zinc finger protein NUTCRACKER OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111848pilonHSYRG00368 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.6e-05
Identity = 49/144 (34.03%), Postives = 72/144 (50.00%), Query Frame = 0


Query: 2   PHSDQPADMVGM---------NMGMYGQMM----------MMKEQDNCSSSSSSFVVHEK 61
           P +DQ + M+G+         +MGM+  M+          +MK  +   S SSS +   +
Sbjct: 331 PQTDQ-SSMMGISPIMSSAMNDMGMFANMLVNGADHQNQGLMKSMEQEDSDSSSLL---Q 390

Query: 62  GQWRPVSRFSGGGGGGGSGESRMTTLDLLGEGGWRLRQLQEDQNHHH---------QQQM 118
           G+ +  + F    GGGGS  S MTTLD +G GG R   L E Q+H           QQQ 
Sbjct: 391 GRTQGPAMFGTNSGGGGS--SNMTTLDFMGIGGSRPNGLHEQQHHQQQRLELEAISQQQR 450

The following BLAST results are available for this feature:

BLAST of Tan0010521 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876751.1	3.6e-39	74.58	zinc finger protein GAI-ASSOCIATED FACTOR 1-like [Benincasa hispida]	[more]
KAA0068031.1	7.9e-39	73.77	protein indeterminate-domain 2-like [Cucumis melo var. makuwa] >TYK18097.1 prote...	[more]
XP_008451665.1	7.9e-39	73.77	PREDICTED: protein indeterminate-domain 2-like [Cucumis melo]	[more]
XP_022153576.1	1.1e-35	75.21	protein indeterminate-domain 2-like [Momordica charantia]	[more]
KAE8646331.1	2.2e-33	70.08	hypothetical protein Csa_015630, partial [Cucumis sativus]	[more]

BLAST of Tan0010521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2F3	3.8e-39	73.77	Protein indeterminate-domain 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BT63	3.8e-39	73.77	protein indeterminate-domain 2-like OS=Cucumis melo OX=3656 GN=LOC103492898 PE=4...	[more]
A0A6J1DL17	5.2e-36	75.21	protein indeterminate-domain 2-like OS=Momordica charantia OX=3673 GN=LOC1110210...	[more]
A0A0A0K7P2	1.1e-33	70.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G395220 PE=4 SV=1	[more]
A0A6A2XAE1	3.6e-05	34.03	Zinc finger protein NUTCRACKER OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig001118...	[more]

BLAST of Tan0010521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010521.1	Tan0010521.1	mRNA