Tan0010390 (gene) Snake gourd v1

Overview
NameTan0010390
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCCHC-type domain-containing protein
LocationLG07: 44094057 .. 44101996 (+)
RNA-Seq ExpressionTan0010390
SyntenyTan0010390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGAGACATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTCATTTTCTGTTGTCGACTTTGAGTATACTCCATGACAACAATGCTGTCGTGAGTGTTGGGCGGGCCCCATTACGACAAAGACGATGGGAGTGCGGGCGGGCCCCACTACATCGTAGAGTAAACGTTGGTTGTATTGAGTATGTCCTACACAACATAGATTGTCATACGTTTTTAAATGGTTAGTAGTATCGATATGCCTTGCGAGATTTTAATGACGTACTTGCTGGATTTCTGAAAAGTTATTATGATTATACGTGTATTTATAACGGTTAATTATAGATGCATATGCTCATACGTTTCCAGGTGATATGATTTATTAGTTATTAGATCTTTAACTCAGTCACTCACTAAGCTTCATAGCTCATTCTTTCAGTGTTTTCAAACTTTTCAGGTAGAGATCGAGCTCCCGGTGTCTGATAACCTGCCATAGTCTGCTGGAAGCTCCACGAGGTTGATATTTCGTAGGTGGGTGGAGTTGTATAGGAAGTCTATATGTATTGTAGGAGGAATATGAAGTTATGTATATGTGTACATTCTAGGTTGAGGTTGTGTAAACCATGGTTGGGTATGTTTTTGGTTGTGATGTTCATATCCGTTTCAGTTTTCAAGAGAGTCTTAAGTAGGGTTACTCCTTACGTAGGTTACGTACTTGTCAATATTCCGTCGTGGTATGTTTAAAGTGTTTCTTATACAAGTATAGTATGCTTATCAGGTAAAATAGGGTCAACAAGTATCGTTAGACAGGTGAACGATGTCTGTTGGCTTCACTCTATCTGCCGAGCTAAGTTAGCTGGTAGCTTGGGAGGGGGTGTGACAACTTGGTATCAGAGAAGTTAGCTCCATGGGGAATAAGACAGAGCAAGTTAACTCTAGAAGAAACTAAAAAGTAAATAGCAAGTTATTGAGTTAGTTCAATAGAACTAGCAGGGCATGATCCAAGTAAGGATAACAGTAAGTCCAGTCAGGACTAGAATGTGAACACAAGTCTAAAATTGTGCATTTGAGTTAAGTATTCATTACATGTCTAGTATGTTGATATGTTATAGAAGTCATGCCACCACGTACTAGCAGACGATGCAGGCAGGATCAGGACGGGACGTAGGATCCTACCCAAGCCCAATCTGAGAGGGGATCTAGTTCTCCGAGAGTCAAGATATGGGCCAGAATTAAGTAGCATGCTAATTCCTCACAGGAGGTAGGTAAGCCATAGAGAGCATAGCTTAGTGATCCAGACAAGACATATAGAATAGATCACCTAAAAGAATTAGGAGCCACAATGTTTGAGGGTTCCAAAGATTCAGCTGACGCCAAGGTTTGGTTGAATATGCTTGAGAAATGTTTTGATGTGATAATTTGTTCTGAGGAGCAGAAAGTTAAGTTAGCTACATTCTTGCTGTTGAAGGAGGCAGAAGGATGGTGGAAATCAATATTAGCCAGGTGTAGAGATGCACGTACTTTAGACTGGAAAACTTTCACAAGCATATTTGAAGATAAGTATTACCCTAGCACGTACCGCGAGGCAAAGAGGGATGAACTTTTAGAATTAAAGCAAGGGTCACTTTCAGTGGCAGAGTACGAGAGAAGGTATACAGAACTGTCACAGTATGCTGATGTGATTGTGGCGTCTGAGAGTGACAGGTGTCGAAGGTTTGAAAGAGGATTATATCCTGAGATACGTAACCAGTTACAACTATTTCTAAGTGGACTAACTTTTCTCAGCTAGTAGAGACTGCTCTACGTGTTGAGCAGACTATAGTAGAGGAGAAGTCAGTAGTAAAGCCTAGTTGTGGGGCTTCGACAATAAGCAGTTTCTAAGGTCGTGAACAGAGGAGGTTCACACCTAGAGTAAATGTTCCAAGTCGTCAGGACTTAAAGAATCATCGAGGACACTGTCTTGTTGATGTGTGTTACCAGTGCGGACAGGCACGACATGTCAAGAGGGATTGTCCACAGCTGAGCGCAGCCGCACAAAGGGACCAGGGAGTTGGGTCCAAGACAGTTGAGCAACCGAGAGTTCCAGTAGCTGAAGAAGAGGGCACCAACGGTGCTAGATAGAAGGGAGTTGTTGGGAGACCTAGGCAGTAGGGAAAGGTCTACGCCATGACTCAGCAAGAAGCGGAGAGTGCACCAGATGTGATTACTGGTACGATTTCTATTTGTAATGTACCTGCACGTGTTTTTATAGATCCAGGTGCTAGCATTCCTTTGTTCCAGTATATACCTGACTAAGCTAAATAGAATGCTAGAGCCTTTATTGGAGAGGTTAGTTATATACACTCCAGTAGGTGATGCTTTATTAGTCAATTCAGTGTTGCGAGATTGTGAGGTTTTAGTAGAAGGTCTCAATATGTTAGTGGATTTTCTTCCACTAGAGTTGCAAGTGTTGGATGCAATCTTAAAGATGGATTTCTTATTTACTCATTATGCTTTCAGAGATTGCAATATAAAGGAAGTTGTTTTCAGGAAACCATGATTAGCTGAAGTGGTTTTCAGGGGTGAAAGAAAGATTATCCCTACGAGTTTGATTTTAGCATTAAAAGTTGAAAAGTTGTTGAGGAAAGGTTGCACGACGTTTCTTGCACATGTAGTTGAGGTGCAGGAAGAAAAGGTAAAACCAGAAAATGTTCTTGTTGTGAATGAATTTCTTGATGTTTTTCCAGCAGCTCTATCAGGATTGCCACCTGATAGGGAAGAGTTCACTATTGAACTGTTACCAGGAATAGCACCTATTTCGCAAGCGTCGTATAGAGTGGCTCCAAGTGAGATCAGGGAGCTGAAGATGCAGTTACAAGGGCTAGTTGATAAGGGATACATCAGACCTAGTGTATCGCCTTGGGGAGCTTCAGTGTTATTTGTGAAGAAGAAAGATGGTACCCTTAGATTATGTATTGATTATAGACAGTTAAACAAAGTCACGATACGCAACAAGTATCATTTACCCCGAATAGATGACTTGTGTGACTAGTTATTAGGAGCATCAGTGTTTTCTAAGATTGATTTAAGATTAGGATACAATCACCTAAAGGTAAGGGAATCAGATATTTCTAAGACAACATTCAAAACGAGGTACGGGCATTATGAGTTTTTAGTAATGCCCTTCGGTTTGACTAATGCACCAACAGTTTTCATGGACCTTATGATCAGGATTTTCCATCAGTATTTGGATCAGTTTGTGATAGTATTTATTTATGACATATTAGTTTACTCAGTTGACAGGAAAGCCCATGAGGAACACATGAGGATTATTTTACAAACACTACGCGATAAACAGTTGTACGCTAAATTCACCAAATGTGAGTTTTGGTTGAATCAGGTAGTGTTTGGGTAAGTTGTTTCAACAAATGGAGTTGGTATGGATCCGCATAAAGTAAAAGCTATGGTCAACTTAGAGAGACCAGCTAATGCGACAGAGGTACGTAGTTTCCTAGGCTTGGCAGGATACTACAGATGATTTGTTGAAAATTTCTCACGATTAGCATTACCCTTAACAGCTTTAACAAGGAAGAATGTTAAGTTTGAATGGCCAGATAAGTGTGAACAAAGTTTTTCAGGAGATGAAAACAAGGTTGGTGACAGTACCTATTCTAACACTTCCTGTAACGGAAAATAGCATGTGATTTACTATGATGCTTCACGACAAGGAATAGGGTGTGTGTTCATGCAAGAATGAAAAGCAATAGCTTATGCGTCAAGACAATTGAAAAAGTACGAGTGTAATTGCTCTACTCCTGTTCTTGAGCTAGCATCAGTTGTTTTACCATAGAAGATTTGGAGGCATTATTTGTTTGGTGAGAGGTGTCACATTTACACAAATCATAAGAGTCTAAAATATATCTTTGATCAGAGAAAGTTTATTATGAGACAGAGAAGATAGTTATAACAGATTAAAGATTATGATTGTACCATAGAATACCATCCAGATAAGGCGAATGTAGTAGCAGATGAAATAAGCAGGAAGTTGGGACTTCCTAGGGACGCCTTGTGTGGTATTCGAGCAATTTTTTTTAAAGTACTCTAAAGGATTCTAAGGCAATTGTGACTACAGAGAATTCAGGGGGTCTTTTAGCTCAATTCCAGATCAAGTCTTCACTCGTAACAGAGATTGTGAGAAGACAACTAGAGAATAGTAATGTGCAGAAAATGTTTGGAATGCCCAAACAGGGCCCAGAGGCATAATTTAGAATGAGAATGGACGAAACCATAGTTATGCAGAGAAGACTATGTGTTCTGAGTATTAATGAGCTTAAAGATGCTATTTTAGAGGAAGCTCACAATTCAGCTTACGTTGTGCATCCAAGAAGCACCAAGATGTATAAAACTGTGAAGGGGACTTATTGGTGGTCTGGGATGAAGGGGGAGATAGCTTACCATGTTGATAGATGTTTGATCTGCCAACAGGTTAAACAGGTTAGATAGATGCAAGAAGGACTCCTTAACCCATTGCCAGTGTCGGAATGGAAATGACAGCATATCACTATGGATTTTATGTTTAGATTACCACGTACTTCAAGGGGACATGATGGTATGGTAATGGTGGATAGACTCACTAAGACAACACAATTTATACCGATTAAATCAACGTCTACACTTGATCAGCTTGCTAAGCTATATGTCGACAGAATTGTGAGTCAATACGGAGTGCCAGTGTCCATAGTTTCAGATAGGGACCCGAGATTTACTTCTATGTTTTGGCCTAGCTTACAGAAAACTATGGGGACAAAGCTGAGTTTTAGTACAACATTTCATTCTCAGACAGATAGACAGTCAGAGAGGACCATCCAGACCCTAGAGGACATGTTGAGAGCATGTGTCCTTCAAGTTAAGGGAAGTTGGGATATACACCTATCACTTATGGAATTGACTTACAATAACAACTATCAGTCTAGTATTGACATGGCACCATTTGAGGCTTTGGATAAACGACCGTGTAGAACGCTCGTATGTTGGAACGAACTAGGAGAGCGGAAGCTAATCGGTCCTGAGTTGGTGCAAATTACGACGGACAACATTAAGGTAATAAGAAAGAATTTGAAGGTAACTCAAGATCGTCAAAGAGTTACGCAGATAAGCAACGAAAGGCCTTATAATTCCAGGTCGGAGATCAAGTTTTCTTGAAGTTATCTCCGTGGAGAGGTGTCCTTCGCTTTTGCAAGAAAAGTAAGCTGAGTCCTAGGTCTATTGGTCCTTATAAGATAGTGGAACGATTTGGGTCAGCAACCTACAGACTTAAGTTGCCATCAGAACTATCTCGAGTACATGATGTTTTTCATGTGTCCATGTTGAGGAAGTATATTCCAGATCCGACACATGTGTTGCAAGCATAACTGTTGAGCTAAAAGAAGACATAAGTTACTTAGAGGATGCAGTTCAAACCCTCGACAGAAAAGAATAAGTTTAAAGAAACAAGGCGACCCCACTTGTGAAGGTTCGTTGGAGACATCACGGAGTGGAAGAGGCAACCTGGGAATTAGAGAACCAAATGAGGAAGAAGTATCCGACGATTTTCACTTAAGGACTACTAAATTTCGAGGACGAAATTTATTAAGGGGGAGGTAAGTTGTAAACCCGAGATCTCTCTTTGGAATTTTCTTACAAAAAAAAAGAGAAAACAAAAGAAAACAAGAAAGGAATATATTTGGTTTGGTTTTGTTTTGAAAACAAAAGAGAAGAAAAGGAAAGGAAGAATGAGATAAAGGAAAAGAATAAAGGAAAAAAAAAAGAAAAAGCAAAAAGGAAAAGGACAAAAACCACCGTATATATCTCATTTTTCACAAATTAGGCCATAGCTTCGTGGGAGAGAAATGAAAAAGAAGAAGGAAAGCTGGTTTTGGTTTGAAGCTGAAGAAGAAAGGAGAAATGTTCAACTAAAGGTTCCATGAAAACTCAATGTTTAACTCAGTCCATTTCTGATATTTGGATCATTTTGAGCTCCACAAGAAGAGGTAAGAGCTGAAACTTGAATTTATTGAAAGTTAACTCATATTTGAACAAAATTCATTAAGGAAGCTCGAGCAATATCTGACCATAAGTTACTGATTTGTGAAGAGGAAGGCAGATGAAAGATTTTGCTGTCAAATCCGAGATGTCTCTGGTTTTTGGGTTGTGCTGATCAGTGGGATTCGAATCAGAATCTCTAATAGGTATGGTTGGAAAGCTTATTACATTTTCTACAACTTTCATGAAGAACTCATGAGAAGAAATCAACTGGAAGATGTTGTAATTTTCAGGTCAAGTTTCGGGTTGGAGCACGGAAATGAATATGAAATAGCAGAAGTTTGTTTCTAGCAAAGAATATTTCGAGGTATTTTCAAACAAATCTGTTGGGAATCTCAATTTTATTTCTTCATAAGATTTTTAAAGGATTCAAAAAGGAAGAGTCTGGTATAATGTACATCCTATTTGGCTAAGTAATGAAGGAGTTATGGAAGTCTGAAGTGAGGGTATGGAATCTATAAAATTCTCGAAAATTGGATGGTGTGATTTTTGTAATTTTAAGGTTGAAAATCATGAGCTCGAGGTTCTAATGCTTGGATTTGGTTTGTTTGACAGGCCAAGAGGAAATAGGTTGAGTGTACGGGCTAAGGTTCTAGTTCTAACAGTGTGAGTGACAAAACGAACCTCGAAAATGGTTTATAGGCTTGTATTATGCTTATTAAAATGCAAGGTTTTGCTAATACAAAATGGTTTCAATGCTTATTGTTTTCCTTTGAACACATGTTTATGGGTATTCATATTTTCTAAGAAATTATTTCAAGTGCTCGTTGTGAGCCTAAATGTCTTGATGAAATTTATATGTGAGCATATGTTCTTGATTGTCGAAATTTATGGAAATGTTATGATTTCGAGCAAGGATGTACTAGCAAGTATGATTTAAAGATTTCCAGTTTTAGTGAACAAGCTGAGTAAGCTTGAGTTTTACGAAAGGAAAGATAAGCAGACATGTTTAAATGTTTTTATGTGTTTCTCTGAGTCTTGAATGAGTAAATGACTGAGACATTGAACCCGAGGCTATATGGTACCGTGTGCACACATGTCATTTTCTGTTGTCGACGTTGAGTGTACTCGGTAACAACAATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGAGAGTGTTGGGTGGGCCCCACTACATCGTAGAGTAAACGTTGGTTGTATTGAGTATGTCCTACACAACATAGATTGTCATACGTTTTTAAATGGTTAGAAGTATCGATATTCCTTGCGAGATTTTAATGACGTACTTGCTGGATTTCTGAAAAGTTATTATGATTATACGTGTATTTCTAACGCTTAATTACAGATGCATATGCTCATAGGTTTCCAGGTGATATGATTTATGAGTTATTAGATCTTTAACTCAGTCACTCAATGAGCTTCATAGCTCATTCTTTCAGTGTTTTCAAACTTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATAACCTGCCATTGTCTGTTCGAAGCTCCACGAGGTTGATATTTCGTACGTGGGTGGAGTTCTATAGGAAGTCTATATGTATTGTAGGAGGAATATGAAGTTATGTATATGTGTACATTCTAGATTGTGGTTGTGTAAACCATGGTTGGGTATGTTTTTTGTTGTGATGTTCATATCCGTTTCAGTTTTCAAGAAAGTCTTAAGTAGGGTTACTCCTTACGTAGGTTACGTAATGGTCAATATTCCGTTGTGGTATGTTTAAAGTGTTTCTTATACAACTATAGTATGCTTATCAGGTAAAACAGGGTCAACATGTATCGTTAGAGAGGTGAACGATGTCTGTTGGCTTCACGCTGTCTGCCGGGCTAAGTTAGCTGGTAGCTCGGGAGGGGGTGTGACAAGAACAACCTATCTAATTCCCTTATTCAGGAATGTGTGA

mRNA sequence

ATGACTGAGACATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGTCTGATAACCTGCCATATATAGTATGCTTATCAGGTAAAATAGGGTCAACAAGTATCGTTAGACAGGTGAACGATGTCTGTTGGCTTCACTCTATCTGCCGAGCTAAGTTAGCTGGTAGCTTGGGAGGGGTTTCAGATAGGGACCCGAGATTTACTTCTATGTTTTGGCCTAGCTTACAGAAAACTATGGGGACAAAGCTGAGTTTTAGTACAACATTTCATTCTCAGACAGATAGACAGCCAAGAGGAAATAGGTTGAGTGTACGGGCTAAGGTTCTAGTTCTAACAGTAGAGATCGAGCTCCCGGTGCCTGATAACCTGCCATTGTCTGTTCGAAGCTCCACGAGGTTGATATTTCGTACGTGGGTGGAGTTCTATAGGAAGTCTATATGTAAAACAGGGTCAACATGTATCGTTAGAGAGGTGAACGATGTCTGTTGGCTTCACGCTGTCTGCCGGGCTAAGTTAGCTGGTAGCTCGGGAGGGGGTGTGACAAGAACAACCTATCTAATTCCCTTATTCAGGAATGTGTGA

Coding sequence (CDS)

ATGACTGAGACATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGTCTGATAACCTGCCATATATAGTATGCTTATCAGGTAAAATAGGGTCAACAAGTATCGTTAGACAGGTGAACGATGTCTGTTGGCTTCACTCTATCTGCCGAGCTAAGTTAGCTGGTAGCTTGGGAGGGGTTTCAGATAGGGACCCGAGATTTACTTCTATGTTTTGGCCTAGCTTACAGAAAACTATGGGGACAAAGCTGAGTTTTAGTACAACATTTCATTCTCAGACAGATAGACAGCCAAGAGGAAATAGGTTGAGTGTACGGGCTAAGGTTCTAGTTCTAACAGTAGAGATCGAGCTCCCGGTGCCTGATAACCTGCCATTGTCTGTTCGAAGCTCCACGAGGTTGATATTTCGTACGTGGGTGGAGTTCTATAGGAAGTCTATATGTAAAACAGGGTCAACATGTATCGTTAGAGAGGTGAACGATGTCTGTTGGCTTCACGCTGTCTGCCGGGCTAAGTTAGCTGGTAGCTCGGGAGGGGGTGTGACAAGAACAACCTATCTAATTCCCTTATTCAGGAATGTGTGA

Protein sequence

MTETLSPRLYGTVCTQVEIELPVSDNLPYIVCLSGKIGSTSIVRQVNDVCWLHSICRAKLAGSLGGVSDRDPRFTSMFWPSLQKTMGTKLSFSTTFHSQTDRQPRGNRLSVRAKVLVLTVEIELPVPDNLPLSVRSSTRLIFRTWVEFYRKSICKTGSTCIVREVNDVCWLHAVCRAKLAGSSGGGVTRTTYLIPLFRNV
Homology
[Close]
BLAST of Tan0010390 vs. NCBI nr
Match: KAA0052218.1 (uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK01785.1 uncharacterized protein E5676_scaffold113G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-10
Identity = 48/102 (47.06%), Postives = 56/102 (54.90%), Query Frame = 0 

Query: 104 PRGNRLSVRAKVLVLTVEIELPVPDNLPLSVRSSTRLIFRTWVEFYRKS----------- 163
           PRGNR ++    L  TVEIELPVPD LP S  SS +    TW+E Y +S           
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESS-KSNSSTWLELYFESVHVEMLFYKPS 138

Query: 164 -------ICKTGSTCIVREVNDVCWLHAVCRAKLAGSSGGGV 188
                  +C  GS  IVR  +D+CWLHAV  AK AGS GGGV
Sbjct: 139 DVRVASYVCWEGSAGIVRG-DDLCWLHAVFWAKTAGSPGGGV 178

[Close]
BLAST of Tan0010390 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-08
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 0 

Query: 119 TVEIELPVPDNLPLSVRSSTRLIFRTWVE-----FYRKSICKTGSTC--------IVREV 178
           ++EIEL VPD LP S  SS      TW+E     FY+ S  +T S          IVRE 
Sbjct: 248 SLEIELLVPDTLPTSAESSGS-NSSTWLEFDFELFYKPSDVRTASRICWEVRSAGIVRE- 307

Query: 179 NDVCWLHAVCRAKLAGSSGGGVTRTTY 193
           NDVCWLHAV RAK+AG SGGGVT  +Y
Sbjct: 308 NDVCWLHAVFRAKIAGGSGGGVTVVSY 332

[Close]
BLAST of Tan0010390 vs. NCBI nr
Match: RVW26904.1 (Transposon Tf2-12 polyprotein [Vitis vinifera])

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-08
Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0 

Query: 67  VSDRDPRFTSMFWPSLQKTMGTKLSFSTTFHSQTDRQPRGN 108
           VSDRDPRFTS FW SLQK +GTKLSFSTTFH QTD Q +G+
Sbjct: 842 VSDRDPRFTSRFWHSLQKALGTKLSFSTTFHPQTDGQSKGS 882

[Close]
BLAST of Tan0010390 vs. NCBI nr
Match: RVW27091.1 (hypothetical protein CK203_098967 [Vitis vinifera])

HSP 1 Score: 68.9 bits (167), Expect = 5.5e-08
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 67  VSDRDPRFTSMFWPSLQKTMGTKLSFSTTFHSQTDRQPRGNRLSVRAKVLV 118
           VSDRDPRFTS FW SLQK +GTKLSFST FHSQTD Q    RL+V    L+
Sbjct: 9   VSDRDPRFTSRFWHSLQKALGTKLSFSTAFHSQTDGQ--SERLTVEKVALI 57

[Close]
BLAST of Tan0010390 vs. NCBI nr
Match: KAA0035809.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 9.4e-08
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0 

Query: 67  VSDRDPRFTSMFWPSLQKTMGTKLSFSTTFHSQTDRQPRGNRLSVRAKVLVLTVEIELPV 126
           VSDRDPRFTS FWPSLQK MGT L FST+FH QTD Q +    ++   +    V+++   
Sbjct: 124 VSDRDPRFTSKFWPSLQKAMGTGLKFSTSFHPQTDGQSKRTIQTLEDMLRACVVQLKGSW 183

Query: 127 PDNLPL 133
             +LPL
Sbjct: 184 DTHLPL 189

[Close]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match: A0A5A7UAH6 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00130 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.8e-10
Identity = 48/102 (47.06%), Postives = 56/102 (54.90%), Query Frame = 0 

Query: 104 PRGNRLSVRAKVLVLTVEIELPVPDNLPLSVRSSTRLIFRTWVEFYRKS----------- 163
           PRGNR ++    L  TVEIELPVPD LP S  SS +    TW+E Y +S           
Sbjct: 79  PRGNRPNLHTGKLDKTVEIELPVPDTLPTSAESS-KSNSSTWLELYFESVHVEMLFYKPS 138

Query: 164 -------ICKTGSTCIVREVNDVCWLHAVCRAKLAGSSGGGV 188
                  +C  GS  IVR  +D+CWLHAV  AK AGS GGGV
Sbjct: 139 DVRVASYVCWEGSAGIVRG-DDLCWLHAVFWAKTAGSPGGGV 178

[Close]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 9.2e-09
Identity = 45/87 (51.72%), Postives = 52/87 (59.77%), Query Frame = 0 

Query: 119 TVEIELPVPDNLPLSVRSSTRLIFRTWVE-----FYRKSICKTGSTC--------IVREV 178
           ++EIEL VPD LP S  SS      TW+E     FY+ S  +T S          IVRE 
Sbjct: 248 SLEIELLVPDTLPTSAESSGS-NSSTWLEFDFELFYKPSDVRTASRICWEVRSAGIVRE- 307

Query: 179 NDVCWLHAVCRAKLAGSSGGGVTRTTY 193
           NDVCWLHAV RAK+AG SGGGVT  +Y
Sbjct: 308 NDVCWLHAVFRAKIAGGSGGGVTVVSY 332

[Close]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match: A0A438CUM5 (Transposon Tf2-12 polyprotein OS=Vitis vinifera OX=29760 GN=Tf2-12_35 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 32/41 (78.05%), Postives = 35/41 (85.37%), Query Frame = 0 

Query: 67  VSDRDPRFTSMFWPSLQKTMGTKLSFSTTFHSQTDRQPRGN 108
           VSDRDPRFTS FW SLQK +GTKLSFSTTFH QTD Q +G+
Sbjct: 842 VSDRDPRFTSRFWHSLQKALGTKLSFSTTFHPQTDGQSKGS 882

[Close]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match: A0A438CV82 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_098967 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-08
Identity = 35/51 (68.63%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 67  VSDRDPRFTSMFWPSLQKTMGTKLSFSTTFHSQTDRQPRGNRLSVRAKVLV 118
           VSDRDPRFTS FW SLQK +GTKLSFST FHSQTD Q    RL+V    L+
Sbjct: 9   VSDRDPRFTSRFWHSLQKALGTKLSFSTAFHSQTDGQ--SERLTVEKVALI 57

[Close]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match: A0A5A7VD33 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00370 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-08
Identity = 39/76 (51.32%), Postives = 44/76 (57.89%), Query Frame = 0 

Query: 38  GSTSIVRQVNDV-CWLHSICRAKLAGS---------LGGVSDRDPRFTSMFWPSLQKTMG 97
           GST + R +    CW   +  AKL G          +  VSDRDPRFTS FWPS+QK MG
Sbjct: 340 GSTKMYRTLKKTYCWPDQL--AKLYGDKIVSQHGVPVSIVSDRDPRFTSKFWPSVQKAMG 399

Query: 98  TKLSFSTTFHSQTDRQ 104
           TKL FST FH  TD Q
Sbjct: 400 TKLKFSTAFHPLTDGQ 413

The following BLAST results are available for this feature:
BLAST of Tan0010390 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0010390 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0052218.15.9e-1047.06uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa] >TYK0... [more]
TYK08801.11.9e-0851.72hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa][more]
RVW26904.12.5e-0878.05Transposon Tf2-12 polyprotein [Vitis vinifera][more]
RVW27091.15.5e-0868.63hypothetical protein CK203_098967 [Vitis vinifera][more]
KAA0035809.19.4e-0851.52DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UAH62.8e-1047.06CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5D3CAC69.2e-0951.72Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A438CUM51.2e-0878.05Transposon Tf2-12 polyprotein OS=Vitis vinifera OX=29760 GN=Tf2-12_35 PE=4 SV=1[more]
A0A438CV822.7e-0868.63Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=CK20... [more]
A0A5A7VD334.5e-0851.32Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=... [more]
BLAST of Tan0010390 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0010390.1Tan0010390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding