Tan0010343 (gene) Snake gourd v1

Overview


Name	Tan0010343
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	GTP-binding nuclear protein
Location	LG09: 66003328 .. 66014723 (-)
RNA-Seq Expression	Tan0010343
Synteny	Tan0010343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCTCAACTCTCAACCCATTTTAACCTAAATCGCCGATTCCTTCCTCTCGTTCAGCTTCTCCATTCGACACATTCTAATGGTGAGTACTCTTTCTCACTCTTACTTCGATCATCTGTTTTCGATCCGATTACTTTTCTGAATATCCGTTAATTTTTGTTCGTTTCTTCCAATTTCTGCTGAATTTCGCAGGCTTTGCCGAACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTCGTGATTGTTGGCGATGGTGGCACTGGTATTTCCTTGTTTCTGAGTTTTCTTTTACAATAATTGTCTGCTGCGGCATCTTGTTCTATGTATCAGATCGTGAGATGTGGTTATTCAGTGGATGCATTAGGGAGAAATGGTCATTGTTCTAGTCGTCATTTTCTTGAATTGATGCGGAATGGAAGAAACTTGTTTTATAATTCCTGAGGTGATGAAGTACTGGAGAGTAACAATTGACCGGCACACGGAAAAGAGAATGGGAGGGGGTCTCAAATCAACTATCAACCATAAAGCTTTAGCCGATCGTTGGGGACCAAATATAATCATATCAATACTAGTCTAACACTCACCTACTTTTCGAACTTAGGATCTCCGGTTCTGATAACATTTTAATTTACCAATCAACCCCCCCGATAGGTTGGGTTAGATTTAATTATATCAATTCTAGTTCAACAGGTGATAGAAGATCAAGCCCAATGTCATGGGGTTTTGTTTATTTAGTTTAATATGCTCATCCCTCTTTAGTTTCAAGGATATATGTTCTGCAAGATCTAAATGAGTTTAATTTAAACCACGAGTCTCTCTCGTGTCATTGACAGCATTGTCTCAGAAAGGTGGTCGCTTCTTTTCATGTGTTGTATGTTTGTCTTTCGCTCTCATACGTCTCTGGCACTTCCCTTAATGGGGGGCAGCTCTTAAAAGACGTGGCATTCTATTGAAATTGTAGATGCGAAACCCAGATATACAAATTAGAAGAAATAGAAAAGGAAGAAAAACATAAGAAGATATCATACATAGGGATGCAAGATGAATTATTTTCAATGCTTTTTTAAGACTTGATATTGAGTGCATAACTGACTTGTGTGTATATCTGTTGACCAGGGAAGACCACTTTTGTGAAGAGACATGTCACTGGGGAGTTTGAGAAGAAATATGAACGTACGCTTTTCAATTATTTGATGTTTTATTCTATTTGTACTGTTTTCTGGATGTTTTATTTTTGATTGTATTCATTCGTCCTTTTGTTGTTTTTATGAAATCAGCTACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGTTTGCGTGATGGTTACTAGTAAGTTAAAGAGGAGAATGAGAGATTTGATTCTTTTGGATGTATTTTACGTGCTTCTGTATTCCCAGATAAACTTTGTTGATTTTTTCCCCTTTTCATTTCTGAAGTCTGTTCTGGTGATTATTTATCTTTCCTCTTAGGTAGGCCTTACATGTTTATTCTGAATTTGAATTGAAACTTTTGTAACTAATTGTCTAATAATCTTGTTGAATTTTCAATATTTTCTTGTACGCTAGATCTGATACATTCATTTATCTTGATACATTGGTTTTTTTTTTGTTATGATGTTCTAGATGTTTTCTTTTTCCCATGAGGGACTTGCATTTCCCCACATGGTCTTCTGAATCAAATTTCCTCCTGCTATCATCAAAATTTCTAATATAGTGTGTTTTCTCCATGATTGCAGCATTCATGGGCAATGTGCGATCATCATGTTTGACGTTACTGCCAGATTGACATACAAAAACGTTCCCACATGGCACCGTGATCTCTGCAGGTGAACATTTGTTTGTACATAATTTGTGGTATATGAGTTAATTGTTCCATTTCATTACTTACATTTGATAACTTCTTCATTATAAATCACAGGGTATGTGAAAACATTCCTATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAATAGGCAAGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAATACTATGAAATATCTGCGAAGAGTAACTACAACTTTGAGAAACCATTCTTGTACCTGGCAAGGAAGTTAGCTGGGTAAATTCAGTTGCCTGTTTGCTTTTACTGTTATCTTCAAAATATTTTTTCATTCATGACAAGTGGTTTTCTTTTCTTATGGTGGCTATACCTAGGGATGCGAACATTCATTTTGTGGAGTCCCCAGCCCTTGCACCTCCAGAAGTACAGATTGACTTGGCAGTCCAGCAACAGTAAGACCTTCTTACCACAACTCATAACAAATGAGAACAATTGACATTCTGTTGAGTAAACCACACTCATATATTGCTTGTTTTCTGCAGGCATGAAGCTGAGTTGGCACAGGCTGCTAGTCAACCTCTGCCAGACGACGATGATGATGCATTTGAGTAGGGACGCCGTTAGATCTTCTGGTGATGCTCTTTACCAGATATCTTTATTCTCTCCTTTTCCCCCCGAGTGATAATCTTGTTGTTAGGATGGACAGGAGGCCATAGGTGGGCTTGGATGGTGGGTATTGATAGAGATTTGAGTTTTGAAAACGTCAAGTTTTCCCGGAACAAAAAAAAGAATTTGGTGTTGATTTTTTTTTTTTGGCAAGTGAGTTGTGTATCAATTAATGTAACCGTGTGGATTAAATGTTACAGTATTTGAGTTGAGTTTATTCCTTTCAACTTTATTCTGCATTCTTGGGATTCTTCTGAGTTGAATGGTATATATGTTCTGTTCTGTTCTGTTCTGCTGGTATCTTGTAGAGGCATGACAAATATTAAATTGGTGTCAATTAATTGAAACGTCCTGAGTGTTTTATTGCAAGAAAATGCTGGATAAACGTCTTTTTATTTTTCTGAACAAATATTTTAGAGTAAATATTTGATACTTGTTTTGATAATTAGTTAGGGAGGTTGGGCAGCAGGAGAAAACTAAAATATTTAAAGAAGGTAAGACAAAAGGAGTCCAACAAAAATAGAACTTAACAAGTTAAGAGTCTAGCACATGAAATAACATTTAAAACATGATCTCAAAATATTCTCATGGTCTAGGAAACACAAACTATACATCCGACAAGGAAAAGAAAACTAAGTTTGGGTTCATGAGACCGGGTCGTTGTCGTCACTTGTTTTAAGGTTCTAAATCAACAAAGTAGACGGCTGAGTACCAAGTAAGCAACTCATTCACACTTAAATAAAGCTAGCAAGTACCAAGCAATCACCACAACTTGAACTCTTTCGAGACAACCAAAAGCACCACAACCTAAACTCTAAACTTTAAATTCTACCCTTGGCCTCATAACCTTGGTTGGCGAATGGCAGTGACGAAGGGGCACGTTCAAACATCCCTCAGGTTCGTCGGGAATCACCTATGAGCCCTCTCGTTGGATTAAGGGCCATGCCCAACCATCCGTGCTTGTCAGGGTAACGCCCTAAGCCATATCGTTCGTGCTTGTCGGGGTAACGCCCTAAGCCATCTTATCGAATGAAGGTTCTCGTCCAATCGCCCGTGCTCGTCGCGATAACGTCCCAGAGCCATCTCGTCGAATGGAAGATCTTGTCCAACTACCTATGCTCGTCAGGGTAACGCCCCTGAGCCATCCTTCTCGGATGGAGGACCTTGTTCAACCATCCCATCTCTGCTTTGTCAACCCGATCTGGGACCAACTAGGGAATCCTTGGGCCCCACCCCAAGGCCTAACTATGCCCCCATCACCTTTTCGACCACACTCGTCATACCCCTGACTCGTCCAACCCCATAACAGATCAAACATAAGCAAGCATAACAGTCCAAACAGTTTAGTCTCGCAAGAACAAGTAACTAACAAGGTTCCAAGGTAGGCTAGGTAATTCCGCATCCACACAAACATGCAACCACCATAATTCAGTCACTAATTAAATCACAAAAACAAGCTAACTCAAGGCAAATAAGAACTAGGCATTTACATGAAAGATTCTCCCTAGTTCAACACCACAACATAACACAAGAATTGATTTCAGTCTTGCAATCATATATAAGTTGTCAAGTATATACAATAAATTCTTCACTAATGAGTTTACTTGTCAAACCAAATGACTACTTACCTTTAGGTGAGATCACGAGTCTGCTACTCATTTCTAAGATTAGCACCCACTTTGCCTACAACAATTAATGAGATAATAGACTATTAACGTTGTTTAGGACTCATCATTAACATTCAAAATGAGCCATCGCCAACCCAAGTATAGGCAAAACTTAAGCATTGCACCTAGGGTCACACTTGGTCCAAATCACACTAAGGAAATGGCCCCACTCGACACCGAATAAACTTCAAAACTTAAAATGCTTACCCACACTCGCGTGCCAGCTACAACGAACAAAATTTTCGAATGCCGAACGAATCAACAGAGCTTTCAGCAAACACAGTCCCTTTCTATCTATGCTCACTGCCCTGCCCAAATGCACCAAACAACTCAAGTACATATGCCTCCCAAAGCTTAGAAGGTTGTATCCAAAGGTCATAACTAACCTCGACCTATAGTAATTCACAAGCCCAAAGTATAGGACACATGAATCCAAAGTGAACGGTACATACCCAATAGATGGACCGAGCTTCCAAGTGGCAGAAGGCTTTGCCATCGGCTAACAATCCCGAACACTAGTTGAAAGAAATGGCCCAAGAAGCCCTCAACAAAGCTACTCGCACAATCTAGCCTTCACTGCCCTATTTAAATGAAAACGTGCACCACCCATTAGCAAAATAAGGGAACGAAACAAAGTGGAGAAAAAAAAGGAAGGGTTTCGGGTCTGTTGGTGATAAGAAAAAGAGAGGGGTCAACGACGTTTCGTGAGGCCTTGTTGGATAGCTCGTAGCTCACAGCGACGCACACGTTCGGTTCCGACGCGAATTAAGGGAGATGGCGGTACAATGGTGGTTGGTTGTTGCCAACGAAACAAACAAACTAAAAAAAAAGGAGAATGGGTTTGGGGCTCACTGGCGCGAGCAATTTGACGGTTGGGGACTCGCTGATGCATAAGGACTGAAGGGACGTCCAGAAGCTCGTCAGTACTCACGGACATGAGGGTGGTCGACCTCGGTTCGACGAGGAAAGGGAAGAGGGATGAAGAGCTTGGCGAAGTTGGTCTTTCGGCTAGGTAGGCTTACGGGGAGACAACAACAGACGAGGGGATTCAAAGGAGGCGATGACGGCGACGGGAGTGAGGAAGTCGAAGGAGGAGGCAACGTGGCATGAAAGAGGTTGACTGATACGAATCCTACCATGATATTCAAAACTAGAGAAAAACTTTCAAATGAAGTTGAATTAAATATTGTCTAACTTCATTCATGAAGAACTAAAGATGCATTTAATGAACTTAAGTGCAATAAATGTTTCATTAAAAACAAGCCAAGCTTCATTTATGCAACAAGTTTCAAAATAAATCAAGTGAAACTTCATTAATGTATCAGAGATTACAAAGACTTTTAAGACAACCAATTGACTTAAATCTTATATTTATTGCTATTTTTATGTAATTTTCAATTTTAAAGTTTTGTTTTAAATGATTTGAGTTAAAATTTAGCTATAGACATTATGGTATTGATGGGATGAAAGTTACAACCTTTCAATTGACCATAGGTTACTCTAGGGTTGATTTTGAGGCTATATAATACCATGTAACTTGTATTTTTGAAGAAGAGAAATCTTTTGAAATGTAATCAAAAGGTGACTTTGAGCTTTATTATAGCCTAGAGCTATTTTCTTTGCAATTCTATGTAAATTAGGTTGTATGCTTAGAATCATTCAAGCTTAACTTGATCAATATTGCTTGTGAAATGATTCGAATCTCATACAAATTTCTTGCCTTGAATGTTTGATCAATAAGATAATTGATTTTACTTTCTTGAGTTGATTTTCAAAATTTGTTTTGGGGTTTTTGAGATTAAGTTCTAAAGGTCTTGTTTTTTTAGCAAGATTGTTAGATCCAATTGTCAAAGATTATTTAACATTTTTGACATAAGAATTTTTGGCTTCTTTGATTTCATTTTGATTTTGGGTATTTGGATTTGTGATCTAAAAGTCTTGTTCTTCAACGAGATTGTTACATTTTAATTTCCTCTTTGATTTCATGTCATTGGCGTTCGACTGAGGAAGTGGAAAGGAGAAAAGAAAAAAAAAAAAAAGAAAGGGAAAAGAAGAAAGAAAAGGAAAGAGAGGAAAAAGAAAAGAAAAGGAAGAGGGGGGAAGGCTTACCAGAATGCCTTTGATCGACGAATGGATTGTCCTCCTTTGACTAGACGTGTAGCGTAGAATAAGACGATGATGAAAGGGGTTGCACTTTCATGATTAAGAATGACCTGAAATAAATAGACCAAAACTAGGTCAGACCAGGTCCTCTTTAAAATTCCAAAACACACATTTGCTCTGAAAATTCTTGAATCTCCAAAGTTTAGCTCAAAACACTAACTATTCCAGTACAAAATAGAACTCAAATAACCCAAAATAATTAACTTGAGCATAACTGATCAAACCGAACATCACAAAAGTTCCAAAAATAAGGTGGAATTTACGTTTATGAAATAATATTGATAAATATTTGCTTTCTCTATGTTTGAAAAGATTAAATTATAAGAGTCTGTTTGGCCCACTGGTTATTATAAGTTGTGTTATAGTAACCTGTAAAATTCTCTACACGCCAAACACAGACTATTATAACCTCAGACTATACTACTCTGCATTTTAAATAATATTATATGTTTCACACATTATAATAACCCACAAACTATTATAACCCCCTTGTGATTATAACTCACTCAGCGCCCCAAACAACCCCTAATAGATTATACTACATTTTCTTTATCATTAGTTGTAATCAAAAGGCAAGATCAAATTACAAATATATTTTCAAAAAAAAAAAAAAATACTTGTCATAGTTAAAAAAAAAGATTAAACTTTCATGTAGAGATTTGAACTTCATTAGTTTTGATTGTGATTACTATTAAGAGATGTATTAAACATGAATTTGAAAATGAAAGGAGAAATTGTTATTTAACAAAAGAGATTTATTATAATCACAAGTTTTAAATAAAACAACAAACCACCATTTTCCTTGGCAAGCATATAAATCTTTTTGAAACTATTTTTTTAAAAAATATAGAATCATTTTTCAAGAACTCTATAACCATGAGAATAGTATTTATAAACTTAATTTTCAAAAATAAAAACTATAAACAAACCAATTATAAGGGCTTAAATTATATTAAAGTAAGTTTATAACTTAGTTTTGTTTTTATTTTTTAAAGCAGATATATTAAAATAAACATTTTGCAAGTAGGACCGTACTAGTAGAAATACCAAGGGGGCGTTTGGCTTCCTGAGTTGAGTTGAGTTGAGTTGGGTTTTAAACCCAATTCACCGTTTGACCTATGGATAAACTAACTCAACTCAACTCTACCGAATTAGGATTTAACTTCACCGACTTGTATAGTAACCCTATTAATATATTTTATCACCACTTCTCCAACAACCGACGACCACTCCCGCGATTGGTAACCACCTTCGGCGACCATTTCTGGCGACCGACGACCACTTCTGACGACCAAAAACCTCCTCCAATAACCATCTCCGGCGACATGGGACAATTTTTTACGGTCGAAAATCACCTCCGACGACCATCTCTGACGATCGGTGACCATCTCTGACGATCGATTACCATCTCTGACTACCGATGACCACCTTTGACGACCGACAACCTTCTCTGACAACCACTGTCGGCGACCTTCACTACCGACGACCATATGCGATAATTGACGATCACTGTTGACTAACTTGTATGACGATTTACAACAATCGTTGATGACCTTATCTAGCAACCAGTAGTATCTTCAACGACGAGTATCACCAAAAATAATTTTCAACGACTGACGACATTCTCATGGTTCAAAATAATACGAACTGCATATGTACTTAGTTAGTCTTACTCTCTACTCCAACAATTTTTTTTCGAACTTACAAAACAATGCTACTATTAGATTATATTTATTGCATTAGATTCTATTTTATCTTATATCACTCCTATAAATTGGTTCTTTAGGTTTGTATTTTATTAAGTCAAATAATACACAATGTAAACCATTACTGTCTTTGTGTTCTCTCTTTTCCCTTTAGGTTATGCTCTCTTTATCAAGTAAGTTTAGATCTTTTTTTAGTATATCAACAATTGAGGGTGATGAGATTCGAACACATGACCTCTTGATCATGAGTCATACTTGATGTTAGTTGAACTATACTTTTAAGAACTTATGGCTTTAGAAAAATATTATTATTATTTTTTTAAATAGCACCACATTGAGACAAAACCGTTTCAAAATTAATACGAAGATCGATCTCTTCAAAACAGTATCTCAAAATTCAAAAATCTCAAAAGATTCAAATCAATGAAGAAAAAGCAACGGTGGAGCGTGACCCGACTGCAAATCCAACGGTCAAGAAAATAGCGTCTGTTGAAAGCCAGTAGTCGCTTACCCTATAAACCCTCGTCCTCAACCCTCATCCCATTTTAACCTAAATCGCCGATTCCTTCCTCTCGTTCCGCTTCTCATTCGACGTATTCTAATGGTGAGTACTCTCTCTCACTCTCACTTCGATCATCTGTTTTCGATCCGGTTACTTTTCTGAATATCTCTTGATTTTTTTTCGTTGCTTCCAATTTCTGCTGTATTTCGCAGGCTTTGCCGAACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGCGATGGTGGCACTGGTATGTTCTGTTTTCTTAGTTTTCTTTTAGAAAAATAGTTTGTTGCGATCGCTGTATCATATATTATGGTGATAGGAATAATACTATTTCGCTGTATCTTCTTAGTACTAGTTTGAGCTTGGAGTGAGAAGAAGAGAGCTTTGAACTTGAAATTATGTTAATGGCGTGTGATTTGAACAAAGATTGCCTGGGGATTGGATTCTTGTTCTAAGAAGAAAATTTGTCTTTGATTTGTTAGGGTTTTAAATTTTGATTAGAAATCGAAACTCGAAAGGTATTAAAGATAAATTCTTTTAAATGCATTACAACCCACATAAACCTCCTTATCTCTTTGGCTGTGATAATTTAAGCAGGAAATTCGTCCTTCATTATTGTTTGATGTTTGCTATAAAAACTTGAAAATCCATGACATTGCCTTGTAATTGAGGATGTTAAAAAGGCAACTTGCACACTAATAGAAGAAAGGAATAAAGAAAGAAAAGAGATTCACGAATTAGATTACTGGATCTTGTTAACCCAGGTAGATGTCCTTTGCTGTATTGTTTCTGTTTGAAGGATCTTCCTTAGTCATGATGGATCCTTCTAATACTTGATAAGACTTGAAATTATGAGTATGTATGACTGAATTGATTATGTTTTGTTGTGCAGGAAAAACAACTTTTGTGAAAAGACATGTCACGGGGGAGTTTGAAAAGAAATACGAACGTAAGCATTTTTGCAAATTTTTTTCCATTTTGTGGTATATTCATTGAACCACCTAGGGTTTTCTTTAAAATAAACAATCAACTTATCGTTATGATTTTATCATTCCATTGTTTCTTATGAACTTTAGCAACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTCTACTGCTGGGACACTGCAGGGCAGGAGAAGTTTGGTGGTTTACGGGATGGCTACTAGTAAGTTAAAGAATGAGGCCTTTTATTCTTTCGGATATATTTTATATGCTCCCAAATTCTATATTCCCAGTTATACTCTGTCGAACAATTTCCTCGTTTCTGGAGGGAGTCTCTTTCGATAATCATTTTCCCTCTTAAGTAGGCCTCTGCCTTTTAGTCTGAACATGAACTGAGAAACTTACGAAACCAATTGTATCTTATTCCACTTGTAATATTGTTGAATTTTCATTATTCTTCTTGTAAATTTGATCTGATAGATTATTTTATCTTGATGACCGTTTTGGGTATGCTTTGAGTCTTGTTATGGTGTGGTTTTAGTTTTCATGGACTTTCTTTTCCCTTCATTTCTCTTTTGATTTGATTTCTGCGTTATCGTTGAAAGTCCTAATTTTGTGTCTTTATCCATTATTGCAGCATCCATGGGCAATGTGCAATCATCATGTTCGATGTTACTGCCAGATTGACATACAAAAATGTTCCTACATGGCACCGTGATCTTTGCAGGTGATTTAATAGTTTGTACACTACTCTTGCATTTGAATGAATTGTTACATTGTCATGGCACCCTCCTGGAAGTTGCTTATCATTTGATGTTGCAGGGTGTGTGAGAACATTCCTATCGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCAAAGCAAGTCACGTTCCACAGGAAGAAGAATCTACAGTATTATGAAATTTCTGCAAAGAGTAACTACAACTTCGAAAAGCCATTCCTGTACTTGGCCAGGAAGTTAGCTGGGTAAATCCGGATCCCTGTTTGAAATTCTTTTTTCTTCAATATTGGAGCTTCATGGAAATTGACTTCCTTATCTTAATGGTGATCCAGGGATGCGAACATTCATTTCGTGGAGTCTCCAGCGCTTGCTCCTCCTGAAGTACAAATTGACTTGGCTATCCAGCAACAGTAAGACCACCTTATCACAACTCGCAACCAATGAACCATTGAAATTCTTTTGAGTAATCCACTGACATTCATATATTTTGCTTGTTTTCTGCAGGCATGAAGCCGAGTTGTTAGCAGCTGCCAGTCAGCCTCTTCCTGATGATGACGACGACGCTTTCGAGTAAAAATGATCAATCATCTGGTGACTATGCTCTTTGCATATCTATTTTCTCCTTTTCTCCCCGAGTGAGATTTTTCTCCTTGCTAGGATTAACAGAAGGGAAATAGGTGGGCAGGGTGTGGCTGAGAATTGAGGCTTGAATTTTGAAAACGTTATTTTTCCCCCGGGATAAAAAGATTGTGGTGGTAGTAGGGGTTGGTTTCTGTTAGTGAGTCTCTATTGATTAATAGAGCCACATGGCCTCCGATGAAAGTTCCATTATGCAGAATTTCTCTATCGAGTGTTCCACTATTTGATTTGTGTTCGTTGTCCCCTTTCTTCTTCCCCACAACGTCCATTGGACTTTGATTTATGTGTTTATCTGTATTTTCTTCAATGAGTAAATAACGTTACATAAAAAAAAATGTTGCTATTAGCGACTAAAGGTGGCATTTGAAGCACCATTTTGAATCGAATCTCTTAGAATTGGAGCC

mRNA sequence

GTCCTCAACTCTCAACCCATTTTAACCTAAATCGCCGATTCCTTCCTCTCGTTCAGCTTCTCCATTCGACACATTCTAATGGCTTTGCCGAACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTCGTGATTGTTGGCGATGGTGGCACTGGGAAGACCACTTTTGTGAAGAGACATGTCACTGGGGAGTTTGAGAAGAAATATGAACCTACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGTTTGCGTGATGGTTACTACATTCATGGGCAATGTGCGATCATCATGTTTGACGTTACTGCCAGATTGACATACAAAAACGTTCCCACATGGCACCGTGATCTCTGCAGGGTATGTGAAAACATTCCTATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAATAGGCAAGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAATACTATGAAATATCTGCGAAGAGTAACTACAACTTTGAGAAACCATTCTTGTACCTGGCAAGGAAGTTAGCTGGGGATGCGAACATTCATTTCGTGGAGTCTCCAGCGCTTGCTCCTCCTGAAGTACAAATTGACTTGGCTATCCAGCAACAGCATGAAGCCGAGTTGTTAGCAGCTGCCAGTCAGCCTCTTCCTGATGATGACGACGACGCTTTCGAGTAAAAATGATCAATCATCTGGTGACTATGCTCTTTGCATATCTATTTTCTCCTTTTCTCCCCGAGTGAGATTTTTCTCCTTGCTAGGATTAACAGAAGGGAAATAGGTGGGCAGGGTGTGGCTGAGAATTGAGGCTTGAATTTTGAAAACGTTATTTTTCCCCCGGGATAAAAAGATTGTGGTGGTAGTAGGGGTTGGTTTCTGTTAGTGAGTCTCTATTGATTAATAGAGCCACATGGCCTCCGATGAAAGTTCCATTATGCAGAATTTCTCTATCGAGTGTTCCACTATTTGATTTGTGTTCGTTGTCCCCTTTCTTCTTCCCCACAACGTCCATTGGACTTTGATTTATGTGTTTATCTGTATTTTCTTCAATGAGTAAATAACGTTACATAAAAAAAAATGTTGCTATTAGCGACTAAAGGTGGCATTTGAAGCACCATTTTGAATCGAATCTCTTAGAATTGGAGCC

Coding sequence (CDS)

ATGGCTTTGCCGAACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTCGTGATTGTTGGCGATGGTGGCACTGGGAAGACCACTTTTGTGAAGAGACATGTCACTGGGGAGTTTGAGAAGAAATATGAACCTACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGCTGGGACACTGCTGGGCAAGAGAAGTTTGGTGGTTTGCGTGATGGTTACTACATTCATGGGCAATGTGCGATCATCATGTTTGACGTTACTGCCAGATTGACATACAAAAACGTTCCCACATGGCACCGTGATCTCTGCAGGGTATGTGAAAACATTCCTATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAATAGGCAAGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAATACTATGAAATATCTGCGAAGAGTAACTACAACTTTGAGAAACCATTCTTGTACCTGGCAAGGAAGTTAGCTGGGGATGCGAACATTCATTTCGTGGAGTCTCCAGCGCTTGCTCCTCCTGAAGTACAAATTGACTTGGCTATCCAGCAACAGCATGAAGCCGAGTTGTTAGCAGCTGCCAGTCAGCCTCTTCCTGATGATGACGACGACGCTTTCGAGTAA

Protein sequence

MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFVESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE

Homology

[Close]

BLAST of Tan0010343 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 454.9 bits (1169), Expect = 5.2e-127
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQQHEAEL AAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy Swiss-Prot
Match: P38548 (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 7.5e-126
Identity = 211/221 (95.48%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQID+A+QQ+HE E+L AA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 446.0 bits (1146), Expect = 2.4e-124
Identity = 209/221 (94.57%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEV +D+A QQQ+EA+L AAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.4e-124
Identity = 210/221 (95.02%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP Q+ VDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQQHEAEL AAASQPLPDDDD+ F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of Tan0010343 vs. ExPASy Swiss-Prot
Match: P41919 (GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum OX=4097 GN=RAN-B1 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 9.1e-124
Identity = 210/221 (95.02%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQ HE ELL AA+  LPDDDD+AFE
Sbjct: 181 ESPALAPPEVQIDLAAQQLHEQELLQAAAHALPDDDDEAFE 221

[Close]

BLAST of Tan0010343 vs. NCBI nr
Match: XP_022932839.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023531726.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo] >KAG6587908.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 460.7 bits (1184), Expect = 7.2e-126
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQKTVDYPSFKLV+VGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQKTVDYPSFKLVLVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA+QQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAVQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. NCBI nr
Match: XP_023531727.1 (GTP-binding nuclear protein Ran-3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.3 bits (1183), Expect = 9.4e-126
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLAIQQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAIQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. NCBI nr
Match: XP_022932841.1 (GTP-binding nuclear protein Ran-3 [Cucurbita moschata] >KAG6587907.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 459.9 bits (1182), Expect = 1.2e-125
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA+QQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAVQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. NCBI nr
Match: XP_022144810.1 (GTP-binding nuclear protein Ran-3 [Momordica charantia])

HSP 1 Score: 456.8 bits (1174), Expect = 1.0e-124
Identity = 217/221 (98.19%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+QKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLA QQQHEAELLAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELLAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. NCBI nr
Match: KAB1204579.1 (GTP-binding nuclear protein Ran-3 [Morella rubra])

HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy TrEMBL
Match: A0A6J1EY53 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111439342 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.5e-126
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQKTVDYPSFKLV+VGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQKTVDYPSFKLVLVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA+QQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAVQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy TrEMBL
Match: A0A6J1EXI0 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111439353 PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 5.9e-126
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA+QQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAVQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy TrEMBL
Match: A0A6J1CSP5 (GTP-binding nuclear protein OS=Momordica charantia OX=3673 GN=LOC111014403 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 5.0e-125
Identity = 217/221 (98.19%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+QKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLA QQQHEAELLAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELLAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy TrEMBL
Match: I1K8X7 (GTP-binding nuclear protein OS=Glycine max OX=3847 GN=GLYMA_06G070500 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.6e-125
Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQQHEAELLAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELLAAASQPLPDDDDDQFE 221

[Close]

BLAST of Tan0010343 vs. ExPASy TrEMBL
Match: A0A6A1UVZ3 (GTP-binding nuclear protein OS=Morella rubra OX=262757 GN=CJ030_MR8G020602 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 6.6e-125
Identity = 216/221 (97.74%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQQHEAEL AAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 454.9 bits (1169), Expect = 3.7e-128
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEVQIDLA QQQHEAEL AAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of Tan0010343 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 446.0 bits (1146), Expect = 1.7e-125
Identity = 209/221 (94.57%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           ESPALAPPEV +D+A QQQ+EA+L AAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of Tan0010343 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 442.6 bits (1137), Expect = 1.9e-124
Identity = 208/221 (94.12%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+TVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPLPDDDDDAFE 222
           E+PALAPPEV ID+A QQ++EAELL AA+QPLPDDDDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of Tan0010343 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-84
Identity = 147/212 (69.34%), Postives = 174/212 (82.08%), Query Frame = 0


Query: 1   MALPNQKTVDYPSFKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPNQ+ VD P+FKL+IVGDGGTGKTTF+KRH+TGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGDA + FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVQIDLAIQQQHEAELLAAASQPL 213
           ES     PE QID    +  +   + A +QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of Tan0010343 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHVTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of Tan0010343 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	5.2e-127	97.29	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P38548	7.5e-126	95.48	GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1	[more]
P41917	2.4e-124	94.57	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41918	2.4e-124	95.02	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]
P41919	9.1e-124	95.02	GTP-binding nuclear protein Ran-B1 OS=Nicotiana tabacum OX=4097 GN=RAN-B1 PE=2 S...	[more]

BLAST of Tan0010343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932839.1	7.2e-126	98.64	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023531726.1 GTP-...	[more]
XP_023531727.1	9.4e-126	99.10	GTP-binding nuclear protein Ran-3 [Cucurbita pepo subsp. pepo]	[more]
XP_022932841.1	1.2e-125	98.64	GTP-binding nuclear protein Ran-3 [Cucurbita moschata] >KAG6587907.1 GTP-binding...	[more]
XP_022144810.1	1.0e-124	98.19	GTP-binding nuclear protein Ran-3 [Momordica charantia]	[more]
KAB1204579.1	1.4e-124	97.74	GTP-binding nuclear protein Ran-3 [Morella rubra]	[more]

BLAST of Tan0010343 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EY53	3.5e-126	98.64	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111439342 PE=3 S...	[more]
A0A6J1EXI0	5.9e-126	98.64	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111439353 PE=3 S...	[more]
A0A6J1CSP5	5.0e-125	98.19	GTP-binding nuclear protein OS=Momordica charantia OX=3673 GN=LOC111014403 PE=3 ...	[more]
I1K8X7	6.6e-125	97.74	GTP-binding nuclear protein OS=Glycine max OX=3847 GN=GLYMA_06G070500 PE=3 SV=1	[more]
A0A6A1UVZ3	6.6e-125	97.74	GTP-binding nuclear protein OS=Morella rubra OX=262757 GN=CJ030_MR8G020602 PE=3 ...	[more]

BLAST of Tan0010343 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	3.7e-128	97.29	RAN GTPase 3	[more]
AT5G20020.1	1.7e-125	94.57	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	1.9e-124	94.12	RAS-related nuclear protein-1	[more]
AT5G55080.1	1.1e-84	69.34	ras-related nuclear protein 4	[more]
AT4G39890.1	1.2e-22	36.59	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 89.88 coord: 94..115 score: 86.19 coord: 130..148 score: 81.38 coord: 168..190 score: 74.92 coord: 27..41 score: 89.23
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..221
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 29.870819
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 9.4E-19 score: 78.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 e-value: 1.4E-165 score: 566.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 2.6E-28 score: 110.0
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..221 score: 19.671633
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 8.02623E-132 score: 365.856
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..170 e-value: 6.2E-9 score: -4.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 2.0E-50 score: 170.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..205 score: 10.210431
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 2.4E-24 score: 84.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..219 e-value: 1.3E-68 score: 232.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010343.1	Tan0010343.1	mRNA
Tan0010343.3	Tan0010343.3	mRNA
Tan0010343.2	Tan0010343.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding