Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGATCCCAAGATCTTAAATACTCTAGTCCTCGATATTCATTTCAAAGGACTAAGGGTTGATGAGCAGGTGGAAGGATTCGCTGTCATCTTCAGACTCAATTACAGACTCATGAAGACTACTATTGAGCCAAGTTGTATAGTCCAAGCCCCAAAAAAGGGAACGACTATATTATTCGAAGCCAATTTGGATAAAGGCCTCCTTGAGTTTCCAAAGACCATAACGTGGGACGAAATCACCAGAAAATCAGAATGGAGATTAGAAAATGCCTTTACTCCTCCTCCTCCAAAGCAAAGAACCCTAACGCTTATCGAATCTAATCCAGACGAAAGCGTTAGGATAGTTTTCGAAGAGGAAGAGCCAGAAATCCTAAAGATTACCCACTTTACTCCGGCTAGACACAGCGCCCAGTGTAGTAGAGCACCTTCAAGAAACTCCAGAATACAAAGGTCAAATTCCCTTAGAATTGAAAGGGTACATCTTGACCAGACGATTCCAAATATTAGATATGAAGGGAAAACCTCACCAACTCATACCGACATGGAAGCTAACCAACTTAATGTCATGACTCAAGATTTTAAAATAGAGATGGAAGGTCTAAAGAAGGATTTCCTTAGCCCAGAGTGGCAAGACGCAAGAAGATATTTTTTCTAA
mRNA sequence
ATGACAGATCCCAAGATCTTAAATACTCTAGTCCTCGATATTCATTTCAAAGGACTAAGGGTTGATGAGCAGGTGGAAGGATTCGCTGTCATCTTCAGACTCAATTACAGACTCATGAAGACTACTATTGAGCCAAGTTGTATAGTCCAAGCCCCAAAAAAGGGAACGACTATATTATTCGAAGCCAATTTGGATAAAGGCCTCCTTGAGTTTCCAAAGACCATAACGTGGGACGAAATCACCAGAAAATCAGAATGGAGATTAGAAAATGCCTTTACTCCTCCTCCTCCAAAGCAAAGAACCCTAACGCTTATCGAATCTAATCCAGACGAAAGCGTTAGGATAGTTTTCGAAGAGGAAGAGCCAGAAATCCTAAAGATTACCCACTTTACTCCGGCTAGACACAGCGCCCAGTGTAGTAGAGCACCTTCAAGAAACTCCAGAATACAAAGGTCAAATTCCCTTAGAATTGAAAGGGTACATCTTGACCAGACGATTCCAAATATTAGATATGAAGGGAAAACCTCACCAACTCATACCGACATGGAAGCTAACCAACTTAATGTCATGACTCAAGATTTTAAAATAGAGATGGAAGGTCTAAAGAAGGATTTCCTTAGCCCAGAGTGGCAAGACGCAAGAAGATATTTTTTCTAA
Coding sequence (CDS)
ATGACAGATCCCAAGATCTTAAATACTCTAGTCCTCGATATTCATTTCAAAGGACTAAGGGTTGATGAGCAGGTGGAAGGATTCGCTGTCATCTTCAGACTCAATTACAGACTCATGAAGACTACTATTGAGCCAAGTTGTATAGTCCAAGCCCCAAAAAAGGGAACGACTATATTATTCGAAGCCAATTTGGATAAAGGCCTCCTTGAGTTTCCAAAGACCATAACGTGGGACGAAATCACCAGAAAATCAGAATGGAGATTAGAAAATGCCTTTACTCCTCCTCCTCCAAAGCAAAGAACCCTAACGCTTATCGAATCTAATCCAGACGAAAGCGTTAGGATAGTTTTCGAAGAGGAAGAGCCAGAAATCCTAAAGATTACCCACTTTACTCCGGCTAGACACAGCGCCCAGTGTAGTAGAGCACCTTCAAGAAACTCCAGAATACAAAGGTCAAATTCCCTTAGAATTGAAAGGGTACATCTTGACCAGACGATTCCAAATATTAGATATGAAGGGAAAACCTCACCAACTCATACCGACATGGAAGCTAACCAACTTAATGTCATGACTCAAGATTTTAAAATAGAGATGGAAGGTCTAAAGAAGGATTTCCTTAGCCCAGAGTGGCAAGACGCAAGAAGATATTTTTTCTAA
Protein sequence
MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILFEANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEEEEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYEGKTSPTHTDMEANQLNVMTQDFKIEMEGLKKDFLSPEWQDARRYFF
Homology
BLAST of Tan0010316 vs. NCBI nr
Match:
KAA0056776.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 105.9 bits (263), Expect = 4.4e-19
Identity = 70/204 (34.31%), Postives = 111/204 (54.41%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 183 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 242
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 243 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGE-TAPVTRSSTEASITEFPDGNVEVQFNSG 302
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P+I +I P+ S + S A R + ++RS S+R V TIP+I YE G
Sbjct: 303 LSYPKISEIMSSRPSTSSIK-SEASYRET-LRRSESIRAS-VDFSHTIPDIHYEKEDGSL 362
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 363 SPTQSDMERRSEPVYNQINVISND 381
BLAST of Tan0010316 vs. NCBI nr
Match:
KAA0050445.1 (hypothetical protein E6C27_scaffold175G00510 [Cucumis melo var. makuwa])
HSP 1 Score: 105.1 bits (261), Expect = 7.6e-19
Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 88 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGVSP-KGYTMLM 147
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 148 EVNIEKSSMTIPRNLNWDELTKNPVWKLQGE-TAPIKRSSTEASITEFPDGNVEVQFNTG 207
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P I +I P+ S + S ++RS S+R V TIP++ YE G
Sbjct: 208 ISYPRISEIMSSRPSTPSIKSE--TSYRDTLRRSESIRAS-VDFSHTIPDVHYEKEDGSL 267
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 268 SPTQSDMERRSEPVYNQINVISDD 286
BLAST of Tan0010316 vs. NCBI nr
Match:
TYJ97599.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 105.1 bits (261), Expect = 7.6e-19
Identity = 69/204 (33.82%), Postives = 110/204 (53.92%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 183 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 242
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 243 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGE-TAPVTRSSTEASITEFPDGNVEVQFNSG 302
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P I +I P+ S + S A R + ++RS S+R V TIP++ YE G
Sbjct: 303 LSYPRISEIMSSRPSTSSIK-SEASYRET-LRRSESIRAS-VDFSHTIPDVHYEKEDGSL 362
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 363 SPTQSDMERRSEPVYNQINVISND 381
BLAST of Tan0010316 vs. NCBI nr
Match:
KAA0059217.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 104.8 bits (260), Expect = 9.9e-19
Identity = 68/204 (33.33%), Postives = 110/204 (53.92%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 183 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 242
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 243 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGE-TAPVTRSSTEASITEFPDGNVEVQFNSG 302
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P + +I P+ S + S A R + ++RS S+R V TIP++ YE G
Sbjct: 303 LSYPRVSEIMSSRPSTSSIK-SEASYRET-LRRSESIRAS-VDFSHTIPDVHYEKEDGSL 362
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 363 SPTQSDMERRSEPVYNQINVISND 381
BLAST of Tan0010316 vs. NCBI nr
Match:
KAA0057417.1 (Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 101.3 bits (251), Expect = 1.1e-17
Identity = 65/204 (31.86%), Postives = 108/204 (52.94%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 88 LQDKNIMDTISLDVHSQGLELKDASLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 147
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ TP ++IE PD +V + F
Sbjct: 148 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSSTEASIIEF-PDGNVEVQFNTG 207
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYEGK---T 180
P I +I P+ S + S ++RS S+R V TIP++ YE +
Sbjct: 208 ISYPRISEIMSSRPSTSSIKTE--TSYRDTLRRSESIRAS-VDFSHTIPDVHYEKEDESL 267
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT ++ME NQ+NV++ D
Sbjct: 268 SPTQSNMERRSEPVHNQINVISDD 286
BLAST of Tan0010316 vs. ExPASy TrEMBL
Match:
A0A5A7UR29 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00660 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 2.1e-19
Identity = 70/204 (34.31%), Postives = 111/204 (54.41%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 183 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 242
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 243 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGE-TAPVTRSSTEASITEFPDGNVEVQFNSG 302
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P+I +I P+ S + S A R + ++RS S+R V TIP+I YE G
Sbjct: 303 LSYPKISEIMSSRPSTSSIK-SEASYRET-LRRSESIRAS-VDFSHTIPDIHYEKEDGSL 362
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 363 SPTQSDMERRSEPVYNQINVISND 381
BLAST of Tan0010316 vs. ExPASy TrEMBL
Match:
A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 3.7e-19
Identity = 69/204 (33.82%), Postives = 110/204 (53.92%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 183 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 242
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 243 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGE-TAPVTRSSTEASITEFPDGNVEVQFNSG 302
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P I +I P+ S + S A R + ++RS S+R V TIP++ YE G
Sbjct: 303 LSYPRISEIMSSRPSTSSIK-SEASYRET-LRRSESIRAS-VDFSHTIPDVHYEKEDGSL 362
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 363 SPTQSDMERRSEPVYNQINVISND 381
BLAST of Tan0010316 vs. ExPASy TrEMBL
Match:
A0A5A7UA27 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00510 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 3.7e-19
Identity = 67/204 (32.84%), Postives = 107/204 (52.45%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 88 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGVSP-KGYTMLM 147
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 148 EVNIEKSSMTIPRNLNWDELTKNPVWKLQGE-TAPIKRSSTEASITEFPDGNVEVQFNTG 207
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P I +I P+ S + S ++RS S+R V TIP++ YE G
Sbjct: 208 ISYPRISEIMSSRPSTPSIKSE--TSYRDTLRRSESIRAS-VDFSHTIPDVHYEKEDGSL 267
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 268 SPTQSDMERRSEPVYNQINVISDD 286
BLAST of Tan0010316 vs. ExPASy TrEMBL
Match:
A0A5A7UX67 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001460 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 4.8e-19
Identity = 68/204 (33.33%), Postives = 110/204 (53.92%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 183 LQDKNIMDTISLDVHSQGLELKDGSLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 242
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ T P + T I PD +V + F
Sbjct: 243 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGE-TAPVTRSSTEASITEFPDGNVEVQFNSG 302
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYE---GKT 180
P + +I P+ S + S A R + ++RS S+R V TIP++ YE G
Sbjct: 303 LSYPRVSEIMSSRPSTSSIK-SEASYRET-LRRSESIRAS-VDFSHTIPDVHYEKEDGSL 362
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT +DME NQ+NV++ D
Sbjct: 363 SPTQSDMERRSEPVYNQINVISND 381
BLAST of Tan0010316 vs. ExPASy TrEMBL
Match:
A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 5.3e-18
Identity = 65/204 (31.86%), Postives = 108/204 (52.94%), Query Frame = 0
Query: 1 MTDPKILNTLVLDIHFKGLRVDEQVEGFAVIFRLNYRLMKTTIEPSCIVQAPKKGTTILF 60
+ D I++T+ LD+H +GL + + FAV +R+ ++LM T + P + +P KG T+L
Sbjct: 88 LQDKNIMDTISLDVHSQGLELKDASLPFAVSYRIYFKLMHTNLSPKALGISP-KGYTMLM 147
Query: 61 EANLDKGLLEFPKTITWDEITRKSEWRLENAFTPPPPKQRTLTLIESNPDESVRIVFEE- 120
E N++K + P+ + WDE+T+ W+L+ TP ++IE PD +V + F
Sbjct: 148 EVNVEKSSMTIPRNLKWDELTKNPIWKLQGETTPIKRSSTEASIIEF-PDGNVEVQFNTG 207
Query: 121 -EEPEILKITHFTPARHSAQCSRAPSRNSRIQRSNSLRIERVHLDQTIPNIRYEGK---T 180
P I +I P+ S + S ++RS S+R V TIP++ YE +
Sbjct: 208 ISYPRISEIMSSRPSTSSIKTE--TSYRDTLRRSESIRAS-VDFSHTIPDVHYEKEDESL 267
Query: 181 SPTHTDMEA------NQLNVMTQD 194
SPT ++ME NQ+NV++ D
Sbjct: 268 SPTQSNMERRSEPVHNQINVISDD 286
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0056776.1 | 4.4e-19 | 34.31 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0050445.1 | 7.6e-19 | 32.84 | hypothetical protein E6C27_scaffold175G00510 [Cucumis melo var. makuwa] | [more] |
| TYJ97599.1 | 7.6e-19 | 33.82 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0059217.1 | 9.9e-19 | 33.33 | Enzymatic polyprotein [Cucumis melo var. makuwa] | [more] |
| KAA0057417.1 | 1.1e-17 | 31.86 | Enzymatic polyprotein [Cucumis melo var. makuwa] >TYK30116.1 Enzymatic polyprote... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7UR29 | 2.1e-19 | 34.31 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48... | [more] |
| A0A5D3BEY3 | 3.7e-19 | 33.82 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... | [more] |
| A0A5A7UA27 | 3.7e-19 | 32.84 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7UX67 | 4.8e-19 | 33.33 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... | [more] |
| A0A5A7URX9 | 5.3e-18 | 31.86 | Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
