Tan0010315 (gene) Snake gourd v1

Overview


Name	Tan0010315
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box domain-containing protein
Location	LG10: 4856492 .. 4860526 (-)
RNA-Seq Expression	Tan0010315
Synteny	Tan0010315

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTATTTCCAACCGCACTTCTCTACGGATAAATTTACAAACTACAATATTCGCAAATGGAATCGCCGATCGATCATCCTCTTCCAAAACCCTTCTTCATAAACCCCTCTGCCCTCTCGAGCTTCGAATTCATGGCGCGGAACGACTTCCTTGGAGGCGGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGCGAATGTCTCAGATGAAAATGGATCCCAAAATGTTCTTCTCCAAGATCCTTTGCAAGTTTTAGGTCCTGATCTCTTAATGGCGATACTGAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGGTCCTGGTACGCTGTTGCTTCCAGCGATTGCCTGTGGAGTTCGAAGGTGAGCATCTTCAATTTGTTAATTCGTTGATGCTATGGTGCTTTTGATTTTGATCGATTCTCTGGAATTGGGTTTTGGTCTTTTATCTTGGTAATTGTTTGTTCAGTGCAAATGGAGACGACTCACTCGTTTTTGCGATTAGAAGTTCGTTTCGTTTGTTGTGGAATGAGGTCCTGGGATATCCGTTGGCTTTCACTTTTGTTTTGTTTTATGTACTTATCTTTTCTCACATCGGGATTTGAATCTTAAATTTATGTTGCCTGTCTTTTTCTGCTGAGTTGAGCCTTTTCTACTTTGATGGATCATCACAAACTGTAGTTAGTAGACTTGTAGTCCAATCTCTCTCTTGTTCATTTGAATTTTTTTCTCTGGAATATTGAAAATTTATCTTCTAACCATGTCCTCGACTTCTTTTAAGGGTCTTTTATACTATCAAAGTGCTTTTAAGCCTATGGAAATCTTAGTTTTGGGTAGATAATCAAAATTGAGTCTGAAAATTTTAAGAACATTAAAATGATTCAAAGTGCAGAATTACTTTTCAAAAGTACTTATACAAGAAGTGCTTCTGCTTAGCCACTTTCTGCCGAAACCATTCTAAGCTACCAAATCTTAACGTCATGAAATCCTATAGAGAAGTACTTGGGTCATTGTATCCTGCTTTCGCCCTTTTGGTACGAAATTGTGTAGGCAATGTTCCTCGCCGGAGAGAGTGTGTGTATTTTAGACACAATGTCTAGAGCTTGTTTAGGTGTGTTTGAAAGCTATATTCTTGATTATTTTTTTAAAAAATTGTCTTTTAGGCTCTGAGATAATGTTTGGAATTTAAAAATACATTTTAGTTTATTTGTTTATATTCAAATATGACATGTTAGTGTGATTACATGCATAGAGGCCAAGCGATTCATATCCTTCTTATTGGATAGGTCATCCCTGGTTATGCACAGGAGATTGTTATTGACTGCTTTGTGTTCCTCCTCTGCTTTTGAATGAGTGATTTCCATGTCTTAAATTATTAGATACTGGGATAGATGATCTAAAATTCTACAAATTTGTTAAAATGGTGTAGTAGTGAAAAACTTACATTCTTTACTGTAAAATTGAACATTTGGTAAGCAAGTTTGTTGTATTTTCTCTTAGTGTGTGGAATTGTGGTTTGGGAAAGCACATATCCCTAGATTGGTGCACATCCGAGGTCTTCCAAAGCTGGCTGCCTATTCATTATCCATCATGGATGGCAAACGAGTTAGTCTCTCTCCCCCCCCATTGTGGGAGTTGTGGGATGTGCTATTACACATATGTATAGATATGTCCCTCCATGTATAGTTGTGTGAATGCAGTTAGGGTGACTGAGTGTATCTATTGATTCTCGTTATCAATCATTTAGAAAAAGAATATGTTCTATTCATGTAGTCCCAAACATGGGAGAATGAGGAGCAGTTATTACTTGGCTATCGTTTTTTATGAGTTTAAATTGTTGTGACAGACTCGCATTATGAGGGAGGATTTATGTGATCATGCTTGGCAATTTCACTTCAATAAGGTATGCCTGTCTTTTATATTTCGACGTTAATATTCATGTTATGAACTAGAATGACGTGCAACCTTGTTAGGAGAGAAGGATATTGAAGTCGTAAATTAACTAGATGTAATTCTATTACGTGATGGTTGTGTTTTATGATTAAAATTATCTAAAACACTCTTGAACTTTGGGATAGGTTTCAATGTTACCCAGGCTTTACAAAGTTTCAATATAACCTTTGAACTTTGAGATTGTTCCAAAAAGTATCCCGAAGATTTTTCTATTAAAATGATGAATGGAAATTGACATGACAACTCATGTCTAAAAATTGGAATGCATGCATGACATCACTTACAATATTATTCATGTAAATTGATGTGCCCGTTGTTATGTAAAAATTGATTTTGTAAATATGTTGTAAATGATGTCAACAATATGTTTTGAATTGAAATGAGCGGTAACAATGATTTTAATCTTCTATACAGTTGAAATTGAATTGTAAATGAGGTTATGTTTGCCTTCCCGCATTTACAATCAGCCATTGCATCAATTTCAGTCTTTCAATTTAACGGAAAAACTTCCCAAATGTATTTTGGAAAAGAATTTCAAAGTACAAGGTTTAAAGTGAAACTTTTCAAAGTTTAGAGGCATAATTGAAACCTATCCCAAAGTTCAAAGATATTTGGTATAATTTAACCTTTTATGATCGATCAAATTTGATTATGTTATAAACTTTTTTCTACACATTTGACCTCTTATTTTTAAACCTCCATGAAAGTTAATCTCTTCTATTCTTTGTTAGGCATTTGCCAATGATTCATGCTGTTTACATCTAGTTTTTTCTTCATATTAGTTGCACACCAATTATTTATTTCCATCTAGAAATTTTAAAATGTATTAGAGTGCACGGTTCCCTGGGAGAGGGGTTAGATGACTGATGATGGATGTTTTAGTAATACAAATTTCATGAATGATGCTTACAATTTTGAGAGCCATTTTAGTGATTATGTTAGTCAAGGTGCGCGCAAGCTCACTTGGACACTCACGGATATAGAAAAAAAGATTATGTTATAAACCATCTTAGATGCACAAAAACTCCCATACTACCACTTGGATTTGGAACATCATGAAGCATGAACACTTTAGTTTAAGTAATGCGTCTATGTCCGACATATGCCACAACATCCGTGTTGTGTCATGTTTGTGACTATGCTTCCTTTTGGAACGTCTATGTTGATGCTCACAATTCTGATAGCACAGTGAGTTAGAGGGGATGTCTCAGTAAGTGTTTAGTACCTAAATTCCGTTTAACAAGTGCAATTGCGCATGGTTCAAAAACATATCATGCTCTAGCTGCCTGCTGGTTTCAAACCAATCTACCAATTTTCTACTTGCATGCCAATGCATCTCAAATTAATCTGCAACTCATCAAAGTTTCCACATCCACATCTTTAAGGCACCTTTCTGATGGTGCAACATTGATTCATAATGTCTGATAAGTTAATTTTCGTTCCTCTCAGGAAGCTCCCATATATTGGCGAGATCTTGATCCATATTGGCAAGGTAGCCTTCCTCTAATGCGACGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGTTTTTCCACTGTAACCACTTTTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGTATAGCCGATGCTGAGAAGGATGGTGGGACGGGGCCTCTTTAATGTTGTTAACATGGTTTAATCAAATTAGTTTCCTATTGGATTTCTTGTCTTCTGATGAGTGACATTATCCTTAAAGGGTCAAACGAGTAGTGCTGAATGCCTGTTTGCTCTTTCTTGTAGAGGCTGTTGTTTTGCTGTGTACAGAATTTTGGGAGTCATAGGAATTGGTATTGGTGATCCTTGGTTTTGGATCACTTGTTCTTTTGATCCTTTGCATAATAATGATAGTAGATTTTGTATGTTTGTAGATGTTGCTCACTTGTAAGTAGTAAGATTTGAAATTAATAAATTGAGTTTATGTTCAA

mRNA sequence

TGTATTTCCAACCGCACTTCTCTACGGATAAATTTACAAACTACAATATTCGCAAATGGAATCGCCGATCGATCATCCTCTTCCAAAACCCTTCTTCATAAACCCCTCTGCCCTCTCGAGCTTCGAATTCATGGCGCGGAACGACTTCCTTGGAGGCGGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGCGAATGTCTCAGATGAAAATGGATCCCAAAATGTTCTTCTCCAAGATCCTTTGCAAGTTTTAGGTCCTGATCTCTTAATGGCGATACTGAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGGTCCTGGTACGCTGTTGCTTCCAGCGATTGCCTGTGGAGTTCGAAGTGTGTGGAATTGTGGTTTGGGAAAGCACATATCCCTAGATTGGTGCACATCCGAGGTCTTCCAAAGCTGGCTGCCTATTCATTATCCATCATGGATGGCAAACGAACTCGCATTATGAGGGAGGATTTATGTGATCATGCTTGGCAATTTCACTTCAATAAGGAAGCTCCCATATATTGGCGAGATCTTGATCCATATTGGCAAGGTAGCCTTCCTCTAATGCGACGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGTTTTTCCACTGTAACCACTTTTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGTATAGCCGATGCTGAGAAGGATGGTGGGACGGGGCCTCTTTAATGTTGTTAACATGGTTTAATCAAATTAGTTTCCTATTGGATTTCTTGTCTTCTGATGAGTGACATTATCCTTAAAGGGTCAAACGAGTAGTGCTGAATGCCTGTTTGCTCTTTCTTGTAGAGGCTGTTGTTTTGCTGTGTACAGAATTTTGGGAGTCATAGGAATTGGTATTGGTGATCCTTGGTTTTGGATCACTTGTTCTTTTGATCCTTTGCATAATAATGATAGTAGATTTTGTATGTTTGTAGATGTTGCTCACTTGTAAGTAGTAAGATTTGAAATTAATAAATTGAGTTTATGTTCAA

Coding sequence (CDS)

ATGGAATCGCCGATCGATCATCCTCTTCCAAAACCCTTCTTCATAAACCCCTCTGCCCTCTCGAGCTTCGAATTCATGGCGCGGAACGACTTCCTTGGAGGCGGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGCGAATGTCTCAGATGAAAATGGATCCCAAAATGTTCTTCTCCAAGATCCTTTGCAAGTTTTAGGTCCTGATCTCTTAATGGCGATACTGAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGGTCCTGGTACGCTGTTGCTTCCAGCGATTGCCTGTGGAGTTCGAAGTGTGTGGAATTGTGGTTTGGGAAAGCACATATCCCTAGATTGGTGCACATCCGAGGTCTTCCAAAGCTGGCTGCCTATTCATTATCCATCATGGATGGCAAACGAACTCGCATTATGAGGGAGGATTTATGTGATCATGCTTGGCAATTTCACTTCAATAAGGAAGCTCCCATATATTGGCGAGATCTTGATCCATATTGGCAAGGTAGCCTTCCTCTAATGCGACGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGTTTTTCCACTGTAACCACTTTTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGTATAGCCGATGCTGAGAAGGATGGTGGGACGGGGCCTCTTTAA

Protein sequence

MESPIDHPLPKPFFINPSALSSFEFMARNDFLGGGARWKARKKKRANVSDENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

Homology

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BLAST of Tan0010315 vs. NCBI nr
Match: XP_022157958.1 (uncharacterized protein LOC111024557 isoform X1 [Momordica charantia])

HSP 1 Score: 463.8 bits (1192), Expect = 1.0e-126
Identity = 223/262 (85.11%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 10  PKPFFINPSALSSFEFMARNDFLGGGARWKARKKKR-ANVSD----ENGSQNVLLQDPLQ 69
           PK F  NPS  SSFEFM + D LGGGA WK RKKK+  NVSD    ENGS+NVLLQDPLQ
Sbjct: 10  PKTFSTNPSWPSSFEFMVQTDGLGGGAHWKTRKKKKPENVSDERRLENGSENVLLQDPLQ 69

Query: 70  VLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIR 129
           VLGPDLLMAIL YVDARSVALSLLVSRSWYAVASSD LWSSKCVELW GKAHIPRL +I+
Sbjct: 70  VLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRLAYIQ 129

Query: 130 GLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYF 189
           GLP LAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYF
Sbjct: 130 GLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSRPLMRRYF 189

Query: 190 HPDGSQTADPDDRVWGGHECCFSTVTTFVG-DGKIREHYVRINRWPRMFVSRNEDWSWKM 249
           HPDGSQTADPDDRVWGGHECCFS VT+F G DGKIREHYVRINRWPRM VSRNEDWSWK+
Sbjct: 190 HPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIREHYVRINRWPRMLVSRNEDWSWKL 249

Query: 250 SNHFTSYSSIADAEKDGGTGPL 266
           SN   SYSSIADA+KDGGTGPL
Sbjct: 250 SNQLASYSSIADADKDGGTGPL 271

[Close]

BLAST of Tan0010315 vs. NCBI nr
Match: KAG6597321.1 (hypothetical protein SDJN03_10501, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 452.6 bits (1163), Expect = 2.3e-123
Identity = 211/247 (85.43%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 23  FEFMARNDFLGGGARWKARKKKRANVSDENGSQN----VLLQDPLQVLGPDLLMAILSYV 82
           FEFMA +  LGGG RWK RKK R NVSDE G QN    VLLQDP +VLG DLLMAIL YV
Sbjct: 219 FEFMAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYV 278

Query: 83  DARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMD 142
           D+RSVALSLLVSRSWY +ASSD LWSSKCVELW GKAHIPRL   RGLPK+AAYSLS+MD
Sbjct: 279 DSRSVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMD 338

Query: 143 GKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRV 202
           G RTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRV
Sbjct: 339 GNRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRV 398

Query: 203 WGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 262
           WGGHECCFSTVTT VGDGKIREHYVRIN+WPRM VSRNEDWSW+MSNHFTSYSSIADAEK
Sbjct: 399 WGGHECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEK 458

Query: 263 DGGTGPL 266
           DGGTGPL
Sbjct: 459 DGGTGPL 465

[Close]

BLAST of Tan0010315 vs. NCBI nr
Match: XP_038875840.1 (uncharacterized protein LOC120068200 [Benincasa hispida])

HSP 1 Score: 451.8 bits (1161), Expect = 4.0e-123
Identity = 211/244 (86.48%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 26  MARNDFLGGGARWKARKKKRANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDAR 85
           MA++D LGGGARWK RKKKR NVSD    +NG++NVLLQDP +VLG DL MAILSY+DAR
Sbjct: 1   MAQSDLLGGGARWKTRKKKRENVSDGREQQNGTRNVLLQDPFEVLGSDLFMAILSYLDAR 60

Query: 86  SVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKR 145
           SVALSLLVSRSWYA+ASSD LWSSKC ELW GKAHIPRL   RGLPKLAAYSLS+MDGKR
Sbjct: 61  SVALSLLVSRSWYAIASSDRLWSSKCEELWLGKAHIPRLAQSRGLPKLAAYSLSVMDGKR 120

Query: 146 TRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGG 205
           TRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGG
Sbjct: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTADPDDRVWGG 180

Query: 206 HECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGG 265
           HE CF TVT+FVGDG+IREHYVRIN+WPRMFVSRNEDWSWKMSNHFTSYSSIADAEK GG
Sbjct: 181 HESCFLTVTSFVGDGEIREHYVRINKWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKAGG 240

[Close]

BLAST of Tan0010315 vs. NCBI nr
Match: KAG7028788.1 (hypothetical protein SDJN02_09969 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446.0 bits (1146), Expect = 2.2e-121
Identity = 208/244 (85.25%), Postives = 217/244 (88.93%), Query Frame = 0


Query: 26  MARNDFLGGGARWKARKKKRANVSDENGSQN----VLLQDPLQVLGPDLLMAILSYVDAR 85
           MA +  LGGG RWK RKK R NVSDE G QN    VLLQDP +VLG DLLMAIL YVD+R
Sbjct: 1   MAHSGLLGGGMRWKTRKKMRENVSDERGQQNGTLSVLLQDPFEVLGSDLLMAILGYVDSR 60

Query: 86  SVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKR 145
           SVALSLLVSRSWY +ASSD LWSSKCVELW GKAHIPRL   RGLPK+AAYSLS+MDG R
Sbjct: 61  SVALSLLVSRSWYGIASSDSLWSSKCVELWLGKAHIPRLAQTRGLPKMAAYSLSVMDGNR 120

Query: 146 TRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGG 205
           TRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRVWGG
Sbjct: 121 TRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHLLMRRYFHPDGSQTADPDDRVWGG 180

Query: 206 HECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGG 265
           HECCFSTVTT VGDGKIREHYVRIN+WPRM VSRNEDWSW+MSNHFTSYSSIADAEKDGG
Sbjct: 181 HECCFSTVTTIVGDGKIREHYVRINKWPRMLVSRNEDWSWEMSNHFTSYSSIADAEKDGG 240

[Close]

BLAST of Tan0010315 vs. NCBI nr
Match: XP_004134023.1 (uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 1.4e-120
Identity = 210/247 (85.02%), Postives = 223/247 (90.28%), Query Frame = 0


Query: 26  MARNDFLGGGARWKAR--KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYV 85
           MA++DFLGGGARWK+R  KKKR  VSDE G Q     N LLQDP +VLG DLL+AILSY+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 86  DARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMD 145
           DARSVALSL VSRSWYAVASSD LWSSKC+ELW GKAHIPRL   RGLPKLAAYSLS+MD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 146 GKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRV 205
           GKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 206 WGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 265
           WGGHE CFSTVT+FVGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

[Close]

BLAST of Tan0010315 vs. ExPASy TrEMBL
Match: A0A6J1DUS5 (uncharacterized protein LOC111024557 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024557 PE=4 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.9e-127
Identity = 223/262 (85.11%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 10  PKPFFINPSALSSFEFMARNDFLGGGARWKARKKKR-ANVSD----ENGSQNVLLQDPLQ 69
           PK F  NPS  SSFEFM + D LGGGA WK RKKK+  NVSD    ENGS+NVLLQDPLQ
Sbjct: 10  PKTFSTNPSWPSSFEFMVQTDGLGGGAHWKTRKKKKPENVSDERRLENGSENVLLQDPLQ 69

Query: 70  VLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIR 129
           VLGPDLLMAIL YVDARSVALSLLVSRSWYAVASSD LWSSKCVELW GKAHIPRL +I+
Sbjct: 70  VLGPDLLMAILGYVDARSVALSLLVSRSWYAVASSDRLWSSKCVELWLGKAHIPRLAYIQ 129

Query: 130 GLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYF 189
           GLP LAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYF
Sbjct: 130 GLPYLAAYSLSVMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSRPLMRRYF 189

Query: 190 HPDGSQTADPDDRVWGGHECCFSTVTTFVG-DGKIREHYVRINRWPRMFVSRNEDWSWKM 249
           HPDGSQTADPDDRVWGGHECCFS VT+F G DGKIREHYVRINRWPRM VSRNEDWSWK+
Sbjct: 190 HPDGSQTADPDDRVWGGHECCFSVVTSFAGDDGKIREHYVRINRWPRMLVSRNEDWSWKL 249

Query: 250 SNHFTSYSSIADAEKDGGTGPL 266
           SN   SYSSIADA+KDGGTGPL
Sbjct: 250 SNQLASYSSIADADKDGGTGPL 271

[Close]

BLAST of Tan0010315 vs. ExPASy TrEMBL
Match: A0A0A0L471 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G133360 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.9e-121
Identity = 210/247 (85.02%), Postives = 223/247 (90.28%), Query Frame = 0


Query: 26  MARNDFLGGGARWKAR--KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYV 85
           MA++DFLGGGARWK+R  KKKR  VSDE G Q     N LLQDP +VLG DLL+AILSY+
Sbjct: 1   MAQSDFLGGGARWKSRKKKKKRETVSDERGQQNSKTRNPLLQDPFEVLGSDLLLAILSYL 60

Query: 86  DARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMD 145
           DARSVALSL VSRSWYAVASSD LWSSKC+ELW GKAHIPRL   RGLPKLAAYSLS+MD
Sbjct: 61  DARSVALSLPVSRSWYAVASSDRLWSSKCMELWLGKAHIPRLAQSRGLPKLAAYSLSVMD 120

Query: 146 GKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRV 205
           GKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDG+QTADPDDRV
Sbjct: 121 GKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGTQTADPDDRV 180

Query: 206 WGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEK 265
           WGGHE CFSTVT+FVGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK
Sbjct: 181 WGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYSSIADPEK 240

[Close]

BLAST of Tan0010315 vs. ExPASy TrEMBL
Match: A0A1S3AWZ4 (uncharacterized protein LOC103483521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483521 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.7e-119
Identity = 210/254 (82.68%), Postives = 221/254 (87.01%), Query Frame = 0


Query: 26  MARNDFLGGGARWKAR---------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLL 85
           MA++DFL GGARWK R         KKKR  VSDE G Q     N +LQDP +VLG DLL
Sbjct: 1   MAQSDFLDGGARWKTRKKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLL 60

Query: 86  MAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAA 145
           M ILSY+DARSVALSLLVSRSWYAVASSD LWSSKC+ELW GKAHIPRL   RGLPKLAA
Sbjct: 61  MIILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWLGKAHIPRLAQSRGLPKLAA 120

Query: 146 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQT 205
           YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQT
Sbjct: 121 YSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQT 180

Query: 206 ADPDDRVWGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYS 265
           ADPDDRVWGGHE CFSTVT+FVGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYS
Sbjct: 181 ADPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYS 240

[Close]

BLAST of Tan0010315 vs. ExPASy TrEMBL
Match: A0A5D3D180 (F-box family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002300 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.9e-119
Identity = 209/252 (82.94%), Postives = 220/252 (87.30%), Query Frame = 0


Query: 26  MARNDFLGGGARWKAR-------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMA 85
           MA++DFL  GARWK R       KKKR  VSDE G Q     N +LQDP +VLG DLLM 
Sbjct: 1   MAQSDFLDSGARWKTRKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLLMI 60

Query: 86  ILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAYS 145
           ILSY+DARSVALSLLVSRSWYAVASSD LWSSKC+ELWFGKAHIPRL   RGLPKLAAYS
Sbjct: 61  ILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWFGKAHIPRLAQSRGLPKLAAYS 120

Query: 146 LSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTAD 205
           LSIMDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTAD
Sbjct: 121 LSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTAD 180

Query: 206 PDDRVWGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSI 265
           PDDRVWGGHE CFSTVT+FVGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSY SI
Sbjct: 181 PDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYLSI 240

[Close]

BLAST of Tan0010315 vs. ExPASy TrEMBL
Match: A0A5A7U1A5 (F-box family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004250 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 6.4e-119
Identity = 209/253 (82.61%), Postives = 220/253 (86.96%), Query Frame = 0


Query: 26  MARNDFLGGGARWKAR--------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLM 85
           MA++DFL  GARWK R        KKKR  VSDE G Q     N +LQDP +VLG DLLM
Sbjct: 1   MAQSDFLDSGARWKTRKKKKKKKKKKKRETVSDERGQQNRRTGNPILQDPFEVLGSDLLM 60

Query: 86  AILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLVHIRGLPKLAAY 145
            ILSY+DARSVALSLLVSRSWYAVASSD LWSSKC+ELWFGKAHIPRL   RGLPKLAAY
Sbjct: 61  IILSYLDARSVALSLLVSRSWYAVASSDRLWSSKCLELWFGKAHIPRLAQSRGLPKLAAY 120

Query: 146 SLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTA 205
           SLSIMDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTA
Sbjct: 121 SLSIMDGKRTRIMREDLCDHAWQFHFNKEAPVYWRDLDPYWQGSHPLMRRYFHPDGSQTA 180

Query: 206 DPDDRVWGGHECCFSTVTTFVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSS 265
           DPDDRVWGGHE CFSTVT+FVGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSY S
Sbjct: 181 DPDDRVWGGHESCFSTVTSFVGDGEIREHYVRINRWPRMFVSRNEDWSWRMSNHFTSYLS 240

The following BLAST results are available for this feature:

BLAST of Tan0010315 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010315 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157958.1	1.0e-126	85.11	uncharacterized protein LOC111024557 isoform X1 [Momordica charantia]	[more]
KAG6597321.1	2.3e-123	85.43	hypothetical protein SDJN03_10501, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038875840.1	4.0e-123	86.48	uncharacterized protein LOC120068200 [Benincasa hispida]	[more]
KAG7028788.1	2.2e-121	85.25	hypothetical protein SDJN02_09969 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004134023.1	1.4e-120	85.02	uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus]	[more]

BLAST of Tan0010315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUS5	4.9e-127	85.11	uncharacterized protein LOC111024557 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0L471	6.9e-121	85.02	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G133360 PE=4 ...	[more]
A0A1S3AWZ4	1.7e-119	82.68	uncharacterized protein LOC103483521 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3D180	4.9e-119	82.94	F-box family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434...	[more]
A0A5A7U1A5	6.4e-119	82.61	F-box family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171...	[more]

BLAST of Tan0010315 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 51..104 e-value: 6.5E-10 score: 40.6
None	No IPR available	PANTHER	PTHR48218	F-BOX DOMAIN CONTAINING PROTEIN	coord: 106..230 coord: 42..106
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 68..105 e-value: 1.4E-6 score: 28.1
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 60..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010315.1	Tan0010315.1	mRNA
Tan0010315.2	Tan0010315.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding