Tan0010234 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAACAAGTGTGTTTTCGTTAGATTTGGCGGTGTATGGGAAGAGGATACATGTACTTATATCGGAGGTCAAATGACCCGTATTGTTGTGCCACTAACGATAACCTACGAAGAATTACGATCAGAGATTTATAGTATTACGTCTATAGACGAGCATTCATATGACGTTGAAATGAGAGTAAAATTCAATACAGACTATCCATCGCCACCAATGTACATAAAAAACAATCGAGATGTTGTATTTTTTTTAATCACTCGGACGTTGCAAGAGTCCAAATCTGGATAACAACTATACAGAGGCAACTCGTCACTGACGGTGGAGAAACTGATGACGACACAAGTGACGACCCGAAATACAACCCTTTACACGAAGTAGAAAGCGACGAAGAAGATGAAGATAAATACGCAGACGAAGATGAGGGAGAGAATCAGGTTGCAAGGTTTGGAGAAGATGTAGAAGAATACGAGGATGATGATGAATACGAGGATGAAGAAATGGTACAGGACGACGTGTACGAAACAGATACCCCTGGTCAATCGAAAGACGTAGAAGAATGCAGAGACGATGGATACGTTCCAAATGATGGTCTACATTTTGATAACGTACTGGAAACGGACTAG ATGGAGAACAAGTGTGTTTTCGTTAGATTTGGCGGTGTATGGGAAGAGGATACATGTACTTATATCGGAGGTCAAATGACCCGTATTGTTGTGCCACTAACGATAACCTACGAAGAATTACGATCAGAGATTTATAGTATTACGTCTATAGACGAGCATTCATATGACGTTGAAATGAGAAGGCAACTCGTCACTGACGGTGGAGAAACTGATGACGACACAAGTGACGACCCGAAATACAACCCTTTACACGAAGTAGAAAGCGACGAAGAAGATGAAGATAAATACGCAGACGAAGATGAGGGAGAGAATCAGGTTGCAAGGTTTGGAGAAGATGTAGAAGAATACGAGGATGATGATGAATACGAGGATGAAGAAATGGTACAGGACGACGTGTACGAAACAGATACCCCTGGTCAATCGAAAGACGTAGAAGAATGCAGAGACGATGGATACGTTCCAAATGATGGTCTACATTTTGATAACGTACTGGAAACGGACTAG ATGGAGAACAAGTGTGTTTTCGTTAGATTTGGCGGTGTATGGGAAGAGGATACATGTACTTATATCGGAGGTCAAATGACCCGTATTGTTGTGCCACTAACGATAACCTACGAAGAATTACGATCAGAGATTTATAGTATTACGTCTATAGACGAGCATTCATATGACGTTGAAATGAGAAGGCAACTCGTCACTGACGGTGGAGAAACTGATGACGACACAAGTGACGACCCGAAATACAACCCTTTACACGAAGTAGAAAGCGACGAAGAAGATGAAGATAAATACGCAGACGAAGATGAGGGAGAGAATCAGGTTGCAAGGTTTGGAGAAGATGTAGAAGAATACGAGGATGATGATGAATACGAGGATGAAGAAATGGTACAGGACGACGTGTACGAAACAGATACCCCTGGTCAATCGAAAGACGTAGAAGAATGCAGAGACGATGGATACGTTCCAAATGATGGTCTACATTTTGATAACGTACTGGAAACGGACTAG MENKCVFVRFGGVWEEDTCTYIGGQMTRIVVPLTITYEELRSEIYSITSIDEHSYDVEMRRQLVTDGGETDDDTSDDPKYNPLHEVESDEEDEDKYADEDEGENQVARFGEDVEEYEDDDEYEDEEMVQDDVYETDTPGQSKDVEECRDDGYVPNDGLHFDNVLETD Homology
BLAST of Tan0010234 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 63.2 bits (152), Expect = 2.5e-06 Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0
BLAST of Tan0010234 vs. NCBI nr
Match: XP_038902319.1 (trichohyalin-like [Benincasa hispida]) HSP 1 Score: 62.0 bits (149), Expect = 5.6e-06 Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 0
BLAST of Tan0010234 vs. NCBI nr
Match: TYK07864.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 2.4e-04 Identity = 23/55 (41.82%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of Tan0010234 vs. NCBI nr
Match: KAA0056639.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 3.1e-04 Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Tan0010234 vs. NCBI nr
Match: KAA0045464.1 (MuDRA-like transposase [Cucumis melo var. makuwa]) HSP 1 Score: 55.1 bits (131), Expect = 6.9e-04 Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Tan0010234 vs. ExPASy TrEMBL
Match: A0A5D3C9E9 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00080 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.1e-04 Identity = 23/55 (41.82%), Postives = 36/55 (65.45%), Query Frame = 0
BLAST of Tan0010234 vs. ExPASy TrEMBL
Match: A0A5A7UT04 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001610 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04 Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 0
BLAST of Tan0010234 vs. ExPASy TrEMBL
Match: A0A5A7TQS3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1770G00270 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 3.3e-04 Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Tan0010234 vs. ExPASy TrEMBL
Match: A0A5A7U2Y3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00460 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 3.3e-04 Identity = 23/60 (38.33%), Postives = 38/60 (63.33%), Query Frame = 0
BLAST of Tan0010234 vs. ExPASy TrEMBL
Match: A0A5D3CZS8 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00720 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 3.3e-04 Identity = 23/60 (38.33%), Postives = 38/60 (63.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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