Tan0010227 (gene) Snake gourd v1

Overview


Name	Tan0010227
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Peroxidase
Location	LG06: 78704943 .. 78705507 (-)
RNA-Seq Expression	Tan0010227
Synteny	Tan0010227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAAACCATTATTTTTTTCACCACAAATTATTCCAAAATTGATCTTGTTTATTTATAATAATAATCATCATCATTTATGGACCAAATCAAGGATGCTTCTTCTTTCTTTTTATGGGAAGATAGTGCAGATTCTGAAGTGGATAGATTATTGTCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTCGCTCTTGCAGCTGCGATGATTTTGCTGGAGATTTGAGAGCCCTTGATTTCCAAGATGATAGGGATGGTGATGGAGATCTAGCCGTTGGCTTGATCGGCGATGATCAGTCTGATCAGCTCGATGGAAGGCGGCGGAGCGGGGTGAGGCTGGAGTACAATTCCGATGAGGAAGAGGAGGAAGAAGAAGAGTCGAGTAATAATTTGGGAGTGAATCAGAATGTGAATGAAATGGAAGATAGGGTCTTTTGGGACACTTGTATGGCAGGAGGGTATCCATGAATATCGTGTTGATTGCTTAAAAGGTTTAAATCTCGTTTTAGTCACAAATGTTTTTAGAGTTATTCTACTAATTTAGTGTTTTAGT

mRNA sequence

AGAAAAACCATTATTTTTTTCACCACAAATTATTCCAAAATTGATCTTGTTTATTTATAATAATAATCATCATCATTTATGGACCAAATCAAGGATGCTTCTTCTTTCTTTTTATGGGAAGATAGTGCAGATTCTGAAGTGGATAGATTATTGTCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTCGCTCTTGCAGCTGCGATGATTTTGCTGGAGATTTGAGAGCCCTTGATTTCCAAGATGATAGGGATGGTGATGGAGATCTAGCCGTTGGCTTGATCGGCGATGATCAGTCTGATCAGCTCGATGGAAGGCGGCGGAGCGGGGTGAGGCTGGAGTACAATTCCGATGAGGAAGAGGAGGAAGAAGAAGAGTCGAGTAATAATTTGGGAGTGAATCAGAATGTGAATGAAATGGAAGATAGGGTCTTTTGGGACACTTGTATGGCAGGAGGGTATCCATGAATATCGTGTTGATTGCTTAAAAGGTTTAAATCTCGTTTTAGTCACAAATGTTTTTAGAGTTATTCTACTAATTTAGTGTTTTAGT

Coding sequence (CDS)

ATGGACCAAATCAAGGATGCTTCTTCTTTCTTTTTATGGGAAGATAGTGCAGATTCTGAAGTGGATAGATTATTGTCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTCGCTCTTGCAGCTGCGATGATTTTGCTGGAGATTTGAGAGCCCTTGATTTCCAAGATGATAGGGATGGTGATGGAGATCTAGCCGTTGGCTTGATCGGCGATGATCAGTCTGATCAGCTCGATGGAAGGCGGCGGAGCGGGGTGAGGCTGGAGTACAATTCCGATGAGGAAGAGGAGGAAGAAGAAGAGTCGAGTAATAATTTGGGAGTGAATCAGAATGTGAATGAAATGGAAGATAGGGTCTTTTGGGACACTTGTATGGCAGGAGGGTATCCATGA

Protein sequence

MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDARSCSCDDFAGDLRALDFQDDRDGDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNVNEMEDRVFWDTCMAGGYP

Homology

[Close]

BLAST of Tan0010227 vs. NCBI nr
Match: KAG6575041.1 (hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-40
Identity = 91/131 (69.47%), Postives = 108/131 (82.44%), Query Frame = 0


Query: 4   IKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDARSCSCDDFAGDLRALDFQDDRD 63
           + +ASS FLWED+ADSEVDRLLSHPH+LESAVDD EDARSCSCDD+A D  A+D QDD D
Sbjct: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYATDRSAVDLQDDGD 60

Query: 64  GDGDLAVGLIGDD-QSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNVNEMEDRV 123
           GD D AVG  GDD +S  LD  R SG  LEY+S+E+EEEEEES+NN+G  +++NEMED++
Sbjct: 61  GDEDRAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMNEMEDKL 120

Query: 124 FWDTCMAGGYP 134
           FWDTCM GGYP
Sbjct: 121 FWDTCMEGGYP 131

[Close]

BLAST of Tan0010227 vs. NCBI nr
Match: KAA0033453.1 (hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 167.5 bits (423), Expect = 7.6e-38
Identity = 102/142 (71.83%), Postives = 115/142 (80.99%), Query Frame = 0


Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDARSCSC--DDFA-GDLRA 60
           MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDA SCSC  +DF+  DLRA
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60

Query: 61  LDFQDDRD-GDGDL--AVGLIGDDQSDQLDGRRRSGVRLEYN-SDEEEEEEEESSNNLGV 120
           LDFQDD D GD DL   + LIGD       GRRRSG  L+Y   +EEEEEEEESS+++GV
Sbjct: 61  LDFQDDGDNGDRDLDQDICLIGD------GGRRRSGAALKYGYEEEEEEEEEESSDDVGV 120

Query: 121 NQNVNEMEDRVFWDTCMAGGYP 134
            +N+NEMED++FWDTCMAGGYP
Sbjct: 121 IRNMNEMEDKLFWDTCMAGGYP 136

[Close]

BLAST of Tan0010227 vs. NCBI nr
Match: KAE8646684.1 (hypothetical protein Csa_005604 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24
Identity = 78/125 (62.40%), Postives = 90/125 (72.00%), Query Frame = 0


Query: 16  SADSEVDRLLSH-PHELESAV---DDQEDARSCSCDDFAGDLRALDFQDDRD---GDGDL 75
           SADSEVD+LLSH PH+LESAV   DDQEDA SCSC++   D    DFQD  D   GDGD 
Sbjct: 31  SADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNN--NDFSIDDFQDAYDGDNGDGDQ 90

Query: 76  AVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNVNEMEDRVFWDTCM 134
            +GLIGD       GRRRSG    Y  +EEEEEEE S+N++G  +N+NEMED+VFWDTCM
Sbjct: 91  DIGLIGD------GGRRRSGA--GYEEEEEEEEEESSNNDVGAIRNMNEMEDKVFWDTCM 145

[Close]

BLAST of Tan0010227 vs. NCBI nr
Match: GAY36063.1 (hypothetical protein CUMW_020050 [Citrus unshiu])

HSP 1 Score: 72.8 bits (177), Expect = 2.5e-09
Identity = 57/142 (40.14%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDARSCSCDDFAGDLRALDFQDDR- 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSCD        LD+  D  
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67

Query: 66  ------DGDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNV- 125
                 DGDG         DQ  Q++     G    + +D  ++EEE SS ++G+N N+ 
Sbjct: 68  NEESNDDGDGS------STDQHRQINW---GGSCKIWWADAADDEEEYSSWDIGINNNIS 127

Query: 126 ----NEMEDRVFWDTCMAGGYP 134
               +EMEDR+FW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of Tan0010227 vs. NCBI nr
Match: KDO74975.1 (hypothetical protein CISIN_1g032474mg [Citrus sinensis])

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-09
Identity = 56/142 (39.44%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDARSCSCDDFAGDLRALDF----- 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSCD        LD+     
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  --QDDRDGDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNV- 125
             + D DGDG         DQ  Q++      +   + +D  ++EEE SS ++G+N N+ 
Sbjct: 68  NEEFDDDGDGS------STDQHRQINWSSSCKI---WWADGADDEEEYSSWDIGINNNIS 127

Query: 126 ----NEMEDRVFWDTCMAGGYP 134
               +EMEDR+FW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of Tan0010227 vs. ExPASy TrEMBL
Match: A0A5A7SSL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001140 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.7e-38
Identity = 102/142 (71.83%), Postives = 115/142 (80.99%), Query Frame = 0


Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDARSCSC--DDFA-GDLRA 60
           MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDA SCSC  +DF+  DLRA
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60

Query: 61  LDFQDDRD-GDGDL--AVGLIGDDQSDQLDGRRRSGVRLEYN-SDEEEEEEEESSNNLGV 120
           LDFQDD D GD DL   + LIGD       GRRRSG  L+Y   +EEEEEEEESS+++GV
Sbjct: 61  LDFQDDGDNGDRDLDQDICLIGD------GGRRRSGAALKYGYEEEEEEEEEESSDDVGV 120

Query: 121 NQNVNEMEDRVFWDTCMAGGYP 134
            +N+NEMED++FWDTCMAGGYP
Sbjct: 121 IRNMNEMEDKLFWDTCMAGGYP 136

[Close]

BLAST of Tan0010227 vs. ExPASy TrEMBL
Match: A0A0A0KBF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 7.1e-34
Identity = 93/140 (66.43%), Postives = 105/140 (75.00%), Query Frame = 0


Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSH-PHELESAV---DDQEDARSCSCDDFAGDLRAL 60
           MDQIKDASSFFLWEDSADSEVD+LLSH PH+LESAV   DDQEDA SCSC++   D    
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNN--NDFSID 60

Query: 61  DFQDDRD---GDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQ 120
           DFQD  D   GDGD  +GLIGD       GRRRSG    Y  +EEEEEEE S+N++G  +
Sbjct: 61  DFQDAYDGDNGDGDQDIGLIGD------GGRRRSGA--GYEEEEEEEEEESSNNDVGAIR 120

Query: 121 NVNEMEDRVFWDTCMAGGYP 134
           N+NEMED+VFWDTCMAGGYP
Sbjct: 121 NMNEMEDKVFWDTCMAGGYP 130

[Close]

BLAST of Tan0010227 vs. ExPASy TrEMBL
Match: A0A2H5N748 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-09
Identity = 57/142 (40.14%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDARSCSCDDFAGDLRALDFQDDR- 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSCD        LD+  D  
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67

Query: 66  ------DGDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNV- 125
                 DGDG         DQ  Q++     G    + +D  ++EEE SS ++G+N N+ 
Sbjct: 68  NEESNDDGDGS------STDQHRQINW---GGSCKIWWADAADDEEEYSSWDIGINNNIS 127

Query: 126 ----NEMEDRVFWDTCMAGGYP 134
               +EMEDR+FW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of Tan0010227 vs. ExPASy TrEMBL
Match: A0A067G8N3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.1e-09
Identity = 56/142 (39.44%), Postives = 76/142 (53.52%), Query Frame = 0


Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDARSCSCDDFAGDLRALDF----- 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSCD        LD+     
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  --QDDRDGDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNLGVNQNV- 125
             + D DGDG         DQ  Q++      +   + +D  ++EEE SS ++G+N N+ 
Sbjct: 68  NEEFDDDGDGS------STDQHRQINWSSSCKI---WWADGADDEEEYSSWDIGINNNIS 127

Query: 126 ----NEMEDRVFWDTCMAGGYP 134
               +EMEDR+FW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

[Close]

BLAST of Tan0010227 vs. ExPASy TrEMBL
Match: A0A7J7CXK2 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01570 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.2e-06
Identity = 53/132 (40.15%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 3   QIKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDARSCSCDDFAGDLRALDFQDDR 62
           ++ D SSF L E SADSE+D             DD +DA SCSCD        LDF DD 
Sbjct: 10  RVLDISSFLLVEGSADSEMDDGYLDTFIAGDDDDDDDDAESCSCDS-----PVLDFSDD- 69

Query: 63  DGDGDLAVGLIGDDQSDQLDGRRRSGVRLEYNSDEEEEEEEESSNNL-GVNQNVNEMEDR 122
               D  + + GD           S + +E  + EE EEEEE S +L    Q  +EMED+
Sbjct: 70  ----DRHMNVHGDYHCWNNCNMWWSDLGIEGMAPEEGEEEEEVSLDLHKTRQAKDEMEDK 129

Query: 123 VFWDTCMAGGYP 134
           +FW+TCM  GYP
Sbjct: 130 LFWETCMELGYP 131

The following BLAST results are available for this feature:

BLAST of Tan0010227 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0010227 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575041.1	1.2e-40	69.47	hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0033453.1	7.6e-38	71.83	hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa]	[more]
KAE8646684.1	2.1e-24	62.40	hypothetical protein Csa_005604 [Cucumis sativus]	[more]
GAY36063.1	2.5e-09	40.14	hypothetical protein CUMW_020050 [Citrus unshiu]	[more]
KDO74975.1	4.3e-09	39.44	hypothetical protein CISIN_1g032474mg [Citrus sinensis]	[more]

BLAST of Tan0010227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSL9	3.7e-38	71.83	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KBF3	7.1e-34	66.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1	[more]
A0A2H5N748	1.2e-09	40.14	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1	[more]
A0A067G8N3	2.1e-09	39.44	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1	[more]
A0A7J7CXK2	2.2e-06	40.15	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01570 ...	[more]

BLAST of Tan0010227 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..93
None	No IPR available	PANTHER	PTHR35726:SF5	SUBFAMILY NOT NAMED	coord: 2..133
None	No IPR available	PANTHER	PTHR35726	GLUTAMIC ACID-RICH PROTEIN-LIKE	coord: 2..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010227.1	Tan0010227.1	mRNA