Tan0010184 (gene) Snake gourd v1

Overview


Name	Tan0010184
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein MIS12 homolog
Location	LG09: 70590161 .. 70593150 (+)
RNA-Seq Expression	Tan0010184
Synteny	Tan0010184

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCAGAGTCTTCAGACTATAAGCCCGCTCCGAGTCCCCATCACTCACAGTCACCACTACCATTTTGGCGGCAAAATTCCTCCATTTGTGCGAAAGCTTGAGAGCTTCCATCTGTTTCTCGATCTAAATTTCTCGTCTAGTTTTTCATTGGGAAAAAAGGCTTTTTTAGGGGGAAGAGAAAGGAAAATTTCGATGGAAGGAAGTAAGGGTGAGGCGGTATTCGATTCACTGAATCTGAATCCTCAGCTCTTCATTAATGAAGCTCTCAATGTTGTTGACGATTTGGTTGATGACGCTTTCGATTTTTATCAATCGTATGGTTCTCTCTGTCTCATCTCTTCAAGTTGGGTTTACAATTTTGTTTGGTTAATTTTGTTCCTGTCAATTATTTTCCTCTTTAGACAAGCCTCAGCCGCCTTGAAGACCGAGGGCTCGGATAGATCCCAGGATCTTATCATGGTAAGGTTTTGATTATATTACTTGACAATCTCTTATCAGCCGTTAATTTTCGATTTTTTAAGTTGGTACTCTGAAGCACTACTTGAAATTGAACAAAATTATTTATCTTACCTAGGGAATATCGCGGGTCCGAACTCTCGTCCAATCGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAATACTGTCTCAATCACTGTTTTTCAGTCCCTGAAGGGTTTTCTTTACCTTCAAATGTAGGTTCTTCTACTCTGTCTGTGATGAGGCTCCTGCCACTTTATTACGCGAAGTTGCTCTATTATTGTTGTTGTGATTAAGTGAGCATTTAAAATGGCTGCTTGCTTATGCAGCGAATTTCCCACTTCATATGTTTCTATATATACACACACACACTGACTTGAGAGCTTCCTTAATTTTTGGTTCTGGAACAAACAAATTTTGAAATTTCGGAAAAAGCCCTATTACTGTTGCATCATCAAGTTTCAATCTTTTTCAAGATATAGTTATGGCTACTTTCAGATGCAGTCACGAGTTTCCATATTTGCTGGCCTGAGAGCTTCCTCATCTTGTTTCCTATAACTCAACGTGGTTCCGTTGACACTAAGAGTATGATTGTGACTGTAAAAGATTCTTTTTAACTCTAGAAGGAATGTAGGCAAATGTCTGCGGCATTTTAGAAATCTCTGTCATTGTCATTGGTGCATCATGCTTAGTCTCTTTTCATTTTTTCAATAAAAAGTTTCATTTCTTATTAAAAAATCATATCTGAAGTCCAACCTATGTGAGATCCAGTTGACTACTTCCATTTTGCATCAATATAGTTACTTGGGCTTGGGCAGTTTCTGTCTGTTTCACTGGCATCTCATTGGAGGCTTCGGTATCTTATTGTCAAGTTACTACATTATCAATGGTTCCATATCTTGTTTGAGAACTTTGAGTTATGGTTAATTGAGTATATTTATTCTCTTACTATTTTTTCTCCTTGCTAATGCAATAAACATATTTCTAATTCAGATCTAAATATTTTCTTTAAGTTGTCTTAGGATGAATCACCTGCTGACACCTCAATAAGTCATGACTACCTCTATGATGTGGATCTGGATACAGAGTTAGATTCTCTTAGGACTAAGCTCTCCGAGGTATTGACTGTTTCATAGAATCATATGTTTATTACTTGTGTTTATGTATATCATATTTCATAAGGAAATATATTTTTCAGGTCAGAAAAGAGAATGTTGTATTGAACCAAGAACTACAAGCTTTAGAAAGGCAAACTGCTTCCAGTAACTCCCAAGTCAATTATTTCAACGAAGCATTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTACGTTGTGTTTAAAATTGATTGTTTCTTTCTGCACTCCTGGGCTTACATGTGCATTACCCTACTAGTATACTCATGAAGGCAGACTCGAAATGAAATATACAAATAATGTAAGAAGCTGATTTATTTTACTTTTTCTCATGATGAAGTTCTATTGTCATAGCCGGCTTGGTAGATTAAAATTTCTGTAAACACCAACTTGCTCCTCTGATAGTTTGTCCAGGCCTGCATTTCTCATTGTGCCACAAACTCTAACACATCCAAATGATATTTTAGTGAACACCTGCAAAATCACTTCATTTTGGTTTTGATTTAGTCAATTTTATATTACATCTAGGAACAGGGCTGGAGGGTATTTCTTTTGGCCTCCCTTTTTCTGGTGTTCATTCCATGAAAGAGGAACTCTAGTCTGTGAATAATGCAAATTCTCTAGCTGTTTTCAATTTGAATGCCACTTGGAACGAAACTCGTTTATTTGCATTAAATTTCATGACACGAAATTTTAGCAGTTGGCAGATAAATACTGTTCGTGATTTTAGGAAGCAAGAATTCTAACATATTTCAAATTCTTGCAGAAATGATGGGAACTGCATCAGAGCTGCGAGCGAAAATAGGAAAACTGAAGAAAAGGAGGATGGAGGAATCCAAGCTTACTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAAGGGTAGGATTTTCAAGCTACTTCATTATCAATCAAGCTTGTTTTAAGCCTATGGAAGGTGAATATCATCTCACATCCTCTTCGGTTCTGCAGGTCTCTCTAATGTTAAGCTGGATGACATTCAAGAACTTTTAGCTGATTTGAACACCCTTTGAACTTATTTCATTATGACATCAACCTTACTGTATATGATGCTTGCTGTGCAACTTGTCACAATGAGTTCTTCAATGTTTTAACTTGATTTGGCTGTGAGATATTCTAAACCAAATTTGTATAATATATCATCTAGATTGATGACACTTCTTAGCAGTTTCCTTAGAGAGTTTACAGATGGGCCATGAATAGGTTAGGTGTTGGCTCAATTCTTCCCATGTATCAATTATTGCGATTTGCATCATCAGGTTAGCCTGATGGTTTCAGAAAGTTTCTTTGCTGGTTTGGCACTTAAATTCAGCTGATTTTGATGGTA

mRNA sequence

GTTCAGAGTCTTCAGACTATAAGCCCGCTCCGAGTCCCCATCACTCACAGTCACCACTACCATTTTGGCGGCAAAATTCCTCCATTTGTGCGAAAGCTTGAGAGCTTCCATCTGTTTCTCGATCTAAATTTCTCGTCTAGTTTTTCATTGGGAAAAAAGGCTTTTTTAGGGGGAAGAGAAAGGAAAATTTCGATGGAAGGAAGTAAGGGTGAGGCGGTATTCGATTCACTGAATCTGAATCCTCAGCTCTTCATTAATGAAGCTCTCAATGTTGTTGACGATTTGGTTGATGACGCTTTCGATTTTTATCAATCACAAGCCTCAGCCGCCTTGAAGACCGAGGGCTCGGATAGATCCCAGGATCTTATCATGGGAATATCGCGGGTCCGAACTCTCGTCCAATCGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAATACTGTCTCAATCACTGTTTTTCAGTCCCTGAAGGGTTTTCTTTACCTTCAAATGATGAATCACCTGCTGACACCTCAATAAGTCATGACTACCTCTATGATGTGGATCTGGATACAGAGTTAGATTCTCTTAGGACTAAGCTCTCCGAGGTCAGAAAAGAGAATGTTGTATTGAACCAAGAACTACAAGCTTTAGAAAGGCAAACTGCTTCCAGTAACTCCCAAGTCAATTATTTCAACGAAGCATTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCAGAGCTGCGAGCGAAAATAGGAAAACTGAAGAAAAGGAGGATGGAGGAATCCAAGCTTACTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAAGGGTCTCTCTAATGTTAAGCTGGATGACATTCAAGAACTTTTAGCTGATTTGAACACCCTTTGAACTTATTTCATTATGACATCAACCTTACTGTATATGATGCTTGCTGTGCAACTTGTCACAATGAGTTCTTCAATGTTTTAACTTGATTTGGCTGTGAGATATTCTAAACCAAATTTGTATAATATATCATCTAGATTGATGACACTTCTTAGCAGTTTCCTTAGAGAGTTTACAGATGGGCCATGAATAGGTTAGGTGTTGGCTCAATTCTTCCCATGTATCAATTATTGCGATTTGCATCATCAGGTTAGCCTGATGGTTTCAGAAAGTTTCTTTGCTGGTTTGGCACTTAAATTCAGCTGATTTTGATGGTA

Coding sequence (CDS)

ATGGAAGGAAGTAAGGGTGAGGCGGTATTCGATTCACTGAATCTGAATCCTCAGCTCTTCATTAATGAAGCTCTCAATGTTGTTGACGATTTGGTTGATGACGCTTTCGATTTTTATCAATCACAAGCCTCAGCCGCCTTGAAGACCGAGGGCTCGGATAGATCCCAGGATCTTATCATGGGAATATCGCGGGTCCGAACTCTCGTCCAATCGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAATACTGTCTCAATCACTGTTTTTCAGTCCCTGAAGGGTTTTCTTTACCTTCAAATGATGAATCACCTGCTGACACCTCAATAAGTCATGACTACCTCTATGATGTGGATCTGGATACAGAGTTAGATTCTCTTAGGACTAAGCTCTCCGAGGTCAGAAAAGAGAATGTTGTATTGAACCAAGAACTACAAGCTTTAGAAAGGCAAACTGCTTCCAGTAACTCCCAAGTCAATTATTTCAACGAAGCATTACAATTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCAGAGCTGCGAGCGAAAATAGGAAAACTGAAGAAAAGGAGGATGGAGGAATCCAAGCTTACTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAAGGGTCTCTCTAATGTTAAGCTGGATGACATTCAAGAACTTTTAGCTGATTTGAACACCCTTTGA

Protein sequence

MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIMGISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLDTELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNTL

Homology

[Close]

BLAST of Tan0010184 vs. ExPASy Swiss-Prot
Match: Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 8.9e-56
Identity = 123/243 (50.62%), Postives = 170/243 (69.96%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSD--RSQDL 60
           MEGSK EAVFDS+NLNPQ+FINEA+N V+D VD AFDFY   AS +LK +GSD  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  IMGISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVD 120
             GI+RVR L+ S +D RL +WE Y L  CF+VP+GF LP ++ES   +S+  D LYD++
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEES---SSVHQDGLYDLE 120

Query: 121 LDTELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQ 180
           LD ELDSLR KL+ V K +V L+ ELQALER + S    +   NEAL+LY+++S++E+F+
Sbjct: 121 LDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFK 180

Query: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADL 240
           EM   ASELRA + +LK RRM+ S+  KV+++  +G          + KL+D+++  A+L
Sbjct: 181 EMTKMASELRASVERLKTRRMKASESAKVKRLKNHG--KEFSAMTFDGKLEDLEKFQAEL 238

Query: 241 NTL 242
             +
Sbjct: 241 RKM 238

[Close]

BLAST of Tan0010184 vs. NCBI nr
Match: KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428.3 bits (1100), Expect = 4.3e-116
Identity = 221/241 (91.70%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDLI+
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELD LR KLSEVRKENVVLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           MGTASELRAKIGKLKKRRMEESKLTKVEK+HTNGDISHHHKG SN KLDDIQE LADL  
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. NCBI nr
Match: XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 427.9 bits (1099), Expect = 5.6e-116
Identity = 221/241 (91.70%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDL +
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELD LR KLSEVRKENVVLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           MGTASELRAKIGKLKKRRMEESKLTKVEK+HTNGDISHHHKG SN KLDDIQE LADL T
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKT 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. NCBI nr
Match: KAG7023263.1 (Protein MIS12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.9 bits (1091), Expect = 4.8e-115
Identity = 219/241 (90.87%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDLI+
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELD LR KLSEVRKENVVLNQELQALERQ ASSNSQVN FNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           MGTASELRAKIGKLKKRRMEESKLTKVEK+HTNGDISHHHKG SN KLDDIQE LADL  
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLKA 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. NCBI nr
Match: XP_022988478.1 (protein MIS12 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 424.5 bits (1090), Expect = 6.2e-115
Identity = 219/241 (90.87%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDLI+
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELD LR  LSEVRKEN+VLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           MGTASELRAKIGKLKKRRMEESKLTKVEK+HTN DISHHHKG SN KLDDIQE LADL T
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLKT 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. NCBI nr
Match: XP_023515498.1 (protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 221/242 (91.32%), Postives = 227/242 (93.80%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDL +
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQ-E 180
           TELD LR KLSEVRKENVVLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQ E
Sbjct: 121 TELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQAE 180

Query: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLN 240
           MMGTASELRAKIGKLKKRRMEESKLTKVEK+HTNGDISHHHKG SN KLDDIQE LADL 
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240

Query: 241 TL 242
           TL
Sbjct: 241 TL 242

[Close]

BLAST of Tan0010184 vs. ExPASy TrEMBL
Match: A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115
Identity = 219/241 (90.87%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDLI+
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELD LR  LSEVRKEN+VLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQEM
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           MGTASELRAKIGKLKKRRMEESKLTKVEK+HTN DISHHHKG SN KLDDIQE LADL T
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLKT 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. ExPASy TrEMBL
Match: A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 217/241 (90.04%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDLI+
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELD LR KLSEVRKEN+VLNQELQALERQ ASSNSQVN FNEALQLYE+NSVNEMFQEM
Sbjct: 121 TELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           MGTASELRAKIGKLKKRRMEESKLTKVEK+HTNGD SHHHKG SN KLDDIQE LADL  
Sbjct: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLKA 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. ExPASy TrEMBL
Match: A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 7.4e-114
Identity = 219/242 (90.50%), Postives = 226/242 (93.39%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGE VFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ+QASA+LKTEGSDRSQDLI+
Sbjct: 1   MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRT VQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESP  TS+S D LYDVDLD
Sbjct: 61  GISRVRTFVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQ-E 180
           TELD LR  LSEVRKEN+VLNQELQALERQTASSNSQVN FNEALQLYEQNSVNEMFQ E
Sbjct: 121 TELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQAE 180

Query: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLN 240
           MMGTASELRAKIGKLKKRRMEESKLTKVEK+HTN DISHHHKG SN KLDDIQE LADL 
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLK 240

Query: 241 TL 242
           TL
Sbjct: 241 TL 242

[Close]

BLAST of Tan0010184 vs. ExPASy TrEMBL
Match: A0A6J1C2Q6 (protein MIS12 homolog OS=Momordica charantia OX=3673 GN=LOC111006900 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.1e-112
Identity = 212/241 (87.97%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSKGEAVFDSLNLNPQLFINEALN+VDDLVDDAFDFYQ QASA LKTEG D+SQDLIM
Sbjct: 1   MEGSKGEAVFDSLNLNPQLFINEALNLVDDLVDDAFDFYQLQASATLKTEGVDKSQDLIM 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVR+ V S LDKRLAMWEKYCLNHCF+VPEGFSLPSNDESPADTSISHD LYDV LD
Sbjct: 61  GISRVRSFVHSVLDKRLAMWEKYCLNHCFAVPEGFSLPSNDESPADTSISHDCLYDVGLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELDSLR +LSEVR+ENVVLNQELQALERQTASSNSQ+N+FNEAL+LYE+ SVNE FQE+
Sbjct: 121 TELDSLRNRLSEVREENVVLNQELQALERQTASSNSQINHFNEALELYEETSVNERFQEV 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLNT 240
           M TASELRAKIGKLKKRR+EESKLTKVEKVHTNGD+SHHHKG SN KLDDIQE LADL T
Sbjct: 181 MNTASELRAKIGKLKKRRIEESKLTKVEKVHTNGDMSHHHKGFSNAKLDDIQEFLADLKT 240

Query: 241 L 242
           L
Sbjct: 241 L 241

[Close]

BLAST of Tan0010184 vs. ExPASy TrEMBL
Match: A0A6J1EZI4 (protein MIS12 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437868 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.2e-109
Identity = 209/239 (87.45%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSDRSQDLIM 60
           MEGSK + VFDSLNL+PQLFINEALNVVDDLV DA DFYQSQAS ALK+EGSDRSQDLIM
Sbjct: 1   MEGSKSDVVFDSLNLDPQLFINEALNVVDDLVGDASDFYQSQASTALKSEGSDRSQDLIM 60

Query: 61  GISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVDLD 120
           GISRVRTL QSGLDKRLAMWEKYCLNHCFSVPE FSLPSNDESPADTSIS+  LYDVDLD
Sbjct: 61  GISRVRTLAQSGLDKRLAMWEKYCLNHCFSVPEDFSLPSNDESPADTSISYGCLYDVDLD 120

Query: 121 TELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQEM 180
           TELDSLR KLSEVRKENV LNQE QALER+TASSNSQ NYFNEALQLYEQ+SVNEMFQEM
Sbjct: 121 TELDSLRNKLSEVRKENVELNQEFQALERKTASSNSQANYFNEALQLYEQSSVNEMFQEM 180

Query: 181 MGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADLN 240
           MGTAS+LRA+IGKLK+R+ME+SKLT V+KVHTNGDISHHHKG SN KLDDIQE LA LN
Sbjct: 181 MGTASDLRAEIGKLKRRKMEDSKLTNVDKVHTNGDISHHHKGFSNAKLDDIQEFLAYLN 239

[Close]

BLAST of Tan0010184 vs. TAIR 10
Match: AT5G35520.1 (minichromosome instability 12 (mis12)-like )

HSP 1 Score: 218.4 bits (555), Expect = 6.3e-57
Identity = 123/243 (50.62%), Postives = 170/243 (69.96%), Query Frame = 0


Query: 1   MEGSKGEAVFDSLNLNPQLFINEALNVVDDLVDDAFDFYQSQASAALKTEGSD--RSQDL 60
           MEGSK EAVFDS+NLNPQ+FINEA+N V+D VD AFDFY   AS +LK +GSD  +SQ L
Sbjct: 1   MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60

Query: 61  IMGISRVRTLVQSGLDKRLAMWEKYCLNHCFSVPEGFSLPSNDESPADTSISHDYLYDVD 120
             GI+RVR L+ S +D RL +WE Y L  CF+VP+GF LP ++ES   +S+  D LYD++
Sbjct: 61  SNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVLPKSEES---SSVHQDGLYDLE 120

Query: 121 LDTELDSLRTKLSEVRKENVVLNQELQALERQTASSNSQVNYFNEALQLYEQNSVNEMFQ 180
           LD ELDSLR KL+ V K +V L+ ELQALER + S    +   NEAL+LY+++S++E+F+
Sbjct: 121 LDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFK 180

Query: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHHHKGLSNVKLDDIQELLADL 240
           EM   ASELRA + +LK RRM+ S+  KV+++  +G          + KL+D+++  A+L
Sbjct: 181 EMTKMASELRASVERLKTRRMKASESAKVKRLKNHG--KEFSAMTFDGKLEDLEKFQAEL 238

Query: 241 NTL 242
             +
Sbjct: 241 RKM 238

The following BLAST results are available for this feature:

BLAST of Tan0010184 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V0Z5	8.9e-56	50.62	Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1	[more]

BLAST of Tan0010184 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589575.1	4.3e-116	91.70	Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023515499.1	5.6e-116	91.70	protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7023263.1	4.8e-115	90.87	Protein MIS12-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022988478.1	6.2e-115	90.87	protein MIS12 homolog isoform X2 [Cucurbita maxima]	[more]
XP_023515498.1	1.4e-114	91.32	protein MIS12 homolog isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0010184 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JME3	3.0e-115	90.87	protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1E0A1	1.1e-114	90.04	protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1	[more]
A0A6J1JD43	7.4e-114	90.50	protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=...	[more]
A0A6J1C2Q6	9.1e-112	87.97	protein MIS12 homolog OS=Momordica charantia OX=3673 GN=LOC111006900 PE=3 SV=1	[more]
A0A6J1EZI4	3.2e-109	87.45	protein MIS12 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437868 P...	[more]

BLAST of Tan0010184 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35520.1	6.3e-57	50.62	minichromosome instability 12 (mis12)-like	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 123..157
IPR008685	Centromere protein Mis12	PFAM	PF05859	Mis12	coord: 11..141 e-value: 1.9E-21 score: 76.6
IPR008685	Centromere protein Mis12	PANTHER	PTHR14527	PROTEIN MIS12 HOMOLOG	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0010184.1	Tan0010184.1	mRNA
Tan0010184.2	Tan0010184.2	mRNA
Tan0010184.3	Tan0010184.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0051382	kinetochore assembly
biological_process	GO:0000070	mitotic sister chromatid segregation
biological_process	GO:0034501	protein localization to kinetochore
biological_process	GO:0000278	mitotic cell cycle
cellular_component	GO:0000818	nuclear MIS12/MIND complex
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus