Tan0010098 (gene) Snake gourd v1

Overview
NameTan0010098
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionEarly dehydration inducible protein
LocationLG02: 82787977 .. 82788330 (+)
RNA-Seq ExpressionTan0010098
SyntenyTan0010098
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCAATCGCAGGTATTAAACAATATTCTACTTCTTCGACTTCGATCTGTGCTGACCATAAATCCAACATAGTTTTTCTGATTATGTTTTGTCTCAAAGGGGTCTGAGAAGATAAATGAAGAAGGAGCCATAGAGACGAAGGTTGACACAGTCGATCAGCGTTCACCGCCGGGGCAGGGCCAGGAGCCCAGAAATGAAAAGACGACGACGGTAATTCATTTAACTCGAAAACAACGCGATGGCGGCGAAGGGCGTGGAGTTTTGGGTAGTGCAGCTGCGGCTGTTGGGAACACTCTTCGTTCTGCCAAGGATGCGATTTTTGGTAAGGGAAAAGACAAGAACCACGACTGA

mRNA sequence

ATGCACCAATCGCAGGGGTCTGAGAAGATAAATGAAGAAGGAGCCATAGAGACGAAGGTTGACACAGTCGATCAGCGTTCACCGCCGGGGCAGGGCCAGGAGCCCAGAAATGAAAAGACGACGACGGTAATTCATTTAACTCGAAAACAACGCGATGGCGGCGAAGGGCGTGGAGTTTTGGGTAGTGCAGCTGCGGCTGTTGGGAACACTCTTCGTTCTGCCAAGGATGCGATTTTTGGTAAGGGAAAAGACAAGAACCACGACTGA

Coding sequence (CDS)

ATGCACCAATCGCAGGGGTCTGAGAAGATAAATGAAGAAGGAGCCATAGAGACGAAGGTTGACACAGTCGATCAGCGTTCACCGCCGGGGCAGGGCCAGGAGCCCAGAAATGAAAAGACGACGACGGTAATTCATTTAACTCGAAAACAACGCGATGGCGGCGAAGGGCGTGGAGTTTTGGGTAGTGCAGCTGCGGCTGTTGGGAACACTCTTCGTTCTGCCAAGGATGCGATTTTTGGTAAGGGAAAAGACAAGAACCACGACTGA

Protein sequence

MHQSQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVLGSAAAAVGNTLRSAKDAIFGKGKDKNHD
Homology
BLAST of Tan0010098 vs. NCBI nr
Match: KAG6585682.1 (hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020595.1 hypothetical protein SDJN02_17281 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 1.0e-30
Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 0

Query: 1  MHQSQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVL 60
          MHQSQGSEKINEEGAIETKV+TVD+RSPPGQ +EPRNEK TTV+HLTRKQ D  +GRGVL
Sbjct: 1  MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEK-TTVVHLTRKQGDDSQGRGVL 60

Query: 61 GSAAAAVGNTLRSAKDAIFGKGKDKNHD 89
          GSAAAAV NTLRSAKDAIFGKGK++N D
Sbjct: 61 GSAAAAVANTLRSAKDAIFGKGKERNDD 87

BLAST of Tan0010098 vs. NCBI nr
Match: KDP41684.1 (hypothetical protein JCGZ_16091 [Jatropha curcas])

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-17
Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0

Query: 4  SQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVLGSA 63
          SQG+E++NEEGAIETKVDTVD RS   Q +EP  EK   V+HLTR++RD G G G+L   
Sbjct: 3  SQGTERVNEEGAIETKVDTVDYRSSAAQ-EEPNKEK-VGVVHLTRQKRDSGSGDGILART 62

Query: 64 AAAVGNTLRSAKDAIFGKGKDKN 87
          AAAV NTLRSAKDA+ G+GKDK+
Sbjct: 63 AAAVTNTLRSAKDAVVGRGKDKD 83

BLAST of Tan0010098 vs. NCBI nr
Match: KAG6784483.1 (hypothetical protein POTOM_010179 [Populus tomentosa])

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 0

Query: 3  QSQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVLGS 62
          ++QG+E+INEEG  ET+V+TVD R+  GQG EP NEK   V+HL R  RD G G G+L S
Sbjct: 2  KTQGTERINEEGEAETRVETVDHRTSAGQG-EPTNEK-VGVVHLKRNTRDSGSGGGILSS 61

Query: 63 AAAAVGNTLRSAKDAIF-GKGKD 85
          AAAAV NT +SAKDAI  G+GKD
Sbjct: 62 AAAAVTNTFKSAKDAIMGGRGKD 82

BLAST of Tan0010098 vs. NCBI nr
Match: XP_034897251.1 (uncharacterized protein LOC118035742 isoform X1 [Populus alba])

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14
Identity = 52/85 (61.18%), Postives = 61/85 (71.76%), Query Frame = 0

Query: 1  MHQSQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVL 60
          M   QG+E+INEEG  ETKV+TVD R+  GQG EP +EK   V+HL R  RD G G G+L
Sbjct: 1  MKTQQGTERINEEGEAETKVETVDHRTSAGQG-EPTDEK-VGVVHLKRNTRDSGSGGGIL 60

Query: 61 GSAAAAVGNTLRSAKDAIF-GKGKD 85
           SAAAAV NT +SAKDAI  G+GKD
Sbjct: 61 SSAAAAVTNTFKSAKDAIMGGRGKD 83

BLAST of Tan0010098 vs. NCBI nr
Match: KAE8652073.1 (hypothetical protein Csa_018632 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.9e-14
Identity = 58/90 (64.44%), Postives = 62/90 (68.89%), Query Frame = 0

Query: 1  MHQSQ--GSEKIN-EEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGR 60
          MHQSQ   S+KIN EEGAIETKV    Q  PP +G        TTV+HLTRKQ   G G 
Sbjct: 1  MHQSQAVSSKKINEEEGAIETKV-VKQQMEPPNEG--------TTVVHLTRKQPTHG-GS 60

Query: 61 GVLGSAAAAVGNTLRSAKDAIFGKGKDKNH 88
          GVLGSAA AVGN LRSAKDA+FGKGK  NH
Sbjct: 61 GVLGSAATAVGNALRSAKDAVFGKGKGTNH 80

BLAST of Tan0010098 vs. ExPASy TrEMBL
Match: A0A067LC75 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-17
Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 0

Query: 4  SQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVLGSA 63
          SQG+E++NEEGAIETKVDTVD RS   Q +EP  EK   V+HLTR++RD G G G+L   
Sbjct: 3  SQGTERVNEEGAIETKVDTVDYRSSAAQ-EEPNKEK-VGVVHLTRQKRDSGSGDGILART 62

Query: 64 AAAVGNTLRSAKDAIFGKGKDKN 87
          AAAV NTLRSAKDA+ G+GKDK+
Sbjct: 63 AAAVTNTLRSAKDAVVGRGKDKD 83

BLAST of Tan0010098 vs. ExPASy TrEMBL
Match: A0A6A1W5Z9 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.4e-14
Identity = 45/84 (53.57%), Postives = 60/84 (71.43%), Query Frame = 0

Query: 1   MHQSQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVL 60
           M++S+G+E++NE+GAIETKV+T D RSP GQ +EP+ E   TV+HLTR +     G   +
Sbjct: 93  MNKSKGTEEVNEQGAIETKVETQDHRSPAGQDKEPKTE-NVTVVHLTRDEGRSSVGGSAM 152

Query: 61  GSAAAAVGNTLRSAKDAIFGKGKD 85
              A A  NT+RSAK+AIFG GKD
Sbjct: 153 AGTATAAANTIRSAKEAIFGGGKD 175

BLAST of Tan0010098 vs. ExPASy TrEMBL
Match: A0A0A0LR80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356060 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.3e-14
Identity = 54/87 (62.07%), Postives = 60/87 (68.97%), Query Frame = 0

Query: 2  HQSQGSEKIN-EEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVL 61
          H++  S+KIN EEGAIETKV    Q  PP +G        TTV+HLTRKQ   G G GVL
Sbjct: 18 HKAVSSKKINEEEGAIETKV-VKQQMEPPNEG--------TTVVHLTRKQPTHG-GSGVL 77

Query: 62 GSAAAAVGNTLRSAKDAIFGKGKDKNH 88
          GSAA AVGN LRSAKDA+FGKGK  NH
Sbjct: 78 GSAATAVGNALRSAKDAVFGKGKGTNH 94

BLAST of Tan0010098 vs. ExPASy TrEMBL
Match: A0A5A7V0S3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00570 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 59/91 (64.84%), Postives = 62/91 (68.13%), Query Frame = 0

Query: 1  MHQSQ--GSEKIN-EEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGR 60
          MHQSQ   SEKIN EEGAI TKV  V Q  P  +G        TTV+HLTRKQ   G G 
Sbjct: 1  MHQSQEGSSEKINEEEGAIGTKV--VKQMEPTNEG--------TTVVHLTRKQPADG-GS 60

Query: 61 GVLGSAAAAVGNTLRSAKDAIFGKGKDKNHD 89
          GVLGSAAAAVGN LRSAKDA+FGKGK K  D
Sbjct: 61 GVLGSAAAAVGNALRSAKDAVFGKGKGKGTD 80

BLAST of Tan0010098 vs. ExPASy TrEMBL
Match: A0A7J7CPR1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00219 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-13
Identity = 46/82 (56.10%), Postives = 60/82 (73.17%), Query Frame = 0

Query: 3  QSQGSEKINEEGAIETKVDTVDQRSPPGQGQEPRNEKTTTVIHLTRKQRDGGEGRGVLGS 62
          +S+G+E+INE+GA+ETKV+TVD +SP G+ ++PR EK   V+HL R     G   GVL  
Sbjct: 2  ESKGTERINEQGAVETKVETVDYQSPAGEDKDPRLEK-VGVVHLRRDDGRSGNKGGVLAG 61

Query: 63 AAAAVGNTLRSAKDAIFGKGKD 85
          AAAAV NT +SAK+AI G GKD
Sbjct: 62 AAAAVANTFKSAKNAIVGSGKD 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585682.11.0e-3084.09hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sorori... [more]
KDP41684.12.9e-1765.06hypothetical protein JCGZ_16091 [Jatropha curcas][more]
KAG6784483.13.9e-1461.45hypothetical protein POTOM_010179 [Populus tomentosa][more]
XP_034897251.13.9e-1461.18uncharacterized protein LOC118035742 isoform X1 [Populus alba][more]
KAE8652073.13.9e-1464.44hypothetical protein Csa_018632 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A067LC751.4e-1765.06Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1[more]
A0A6A1W5Z92.4e-1453.57Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1[more]
A0A0A0LR809.3e-1462.07Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356060 PE=4 SV=1[more]
A0A5A7V0S31.2e-1364.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A7J7CPR11.6e-1356.10Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00219 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0010098.1Tan0010098.1mRNA