Tan0009993 (gene) Snake gourd v1

Overview


Name	Tan0009993
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	GATA transcription factor 15-like
Location	LG06: 5864376 .. 5866635 (+)
RNA-Seq Expression	Tan0009993
Synteny	Tan0009993

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATTTCCAGTTGCAGTTCTTCATGGACCGCTCAGATCTCTCAGCTGGCTCGACCTTCAATAATCAATCATCTTCTGATCTAATGCCCATCTCCAACCACAGAACCTGCGTCCACTGTCGCACCACCACCACCCCCCTCTGGAGAACCGGTCCCGCCGGCCCAAGGGTAACCCACTCTTTTTCTTTTTCTTTTCTTTTTTCTTTATATATATATATACACACATACATGTGTGTGTTTTGACTTTTATCAATACTTTAAACAATATATCACTTAAGTTATATATCTACTATTGGGGATGTCTATTTTTCCCGCTTCCGCGGACATCCGTTCCTAACGGGGCGGAGGATCCTCGTTTATGCAGGAAATGAGGGAGAGAGGGAGCGGGGTGAAAATTTTCTCTGTTGGTTAAAGTCCCTGACCCCGACCCCGTTCTTGCCCCTCTCCCCGTCTCCGCCCGTTTTATATATATTTTTTAAAATATGTATATTTGTATATATATAATAAATCATAATTCAAATTTTTATTAAATATTATTTTATTTTTATAAGAAAATTGAAAAAAAAAAGTATCTTAAATATAAATCCTTAATAAAGAATTAATCATTTAAATAAAAATTTTCAAAATTAAAAAAAAACCATTTAATAAAATTTAGAAAATAAAAAAAATAAACGGAATAATTTCCCGTGGGAAACTCGATCTCTGCGAATTCCCTACGGGAAATTTTCGTTCCGTTACCGGCAAAATTAAATGGAGAATTTTACAAAAATAGGAAATGAAATAAGAAGCGAGATGGAGAAGCATTCTCCGACGTGCTCCGCTCTATGGACATCCCTACCCCATGCAACTTTAGAAATAATATGTTAAATGTTTTTTTTCAAAACTTGGTTGTTGTTTTTTTTTTGTTGGATTGACAGAACTCATCCACTTTTAAATGCTTTTTTTTTTTAATTTGGTTTTATAACTTTTCAACTCACTCCTCATTATTTAAAATATATTGATAAAATAATAGGTTTGTAAAGGATAATTGAACCACATCCACATCCACAACCTAATCTAACCTCAAATAGAATGTTTGAAACATTTAGTGAATTATAATAACATGAATTGAAATAGTTATTGAAATTATATAATATTATTAAGATGTAGAGTTATTTAGTATGAGGTTATTATAATACAAATTATTATATCTCACGTCCCAAACAACTATAAATTTTTATGACTATATTTTTGTTTCTATCTAGAGGTCAATCTCATCAATAAAAAAAAATAAAATTTTTTAAATTGTATTCTCATGATTATTTAGTCAATATAAAGCTTTATTTGTACTTCTAATCTTTAAGATGGTAATTTATATCTTATTTATTGAGCTAAAAATACTATAAGCTTTTTATTTAAAAACATGAAAAACTTAAAAAATTGTTGAAAGAGGCCACTTCAGTGTTGACTAACAGTTTTAATGGTTGGATATATATTGAATCAATATGCAATAGTTATTAGGGCTCGTGGCAACTTGATTTATTTATTACTTTTTTTTTTGGCCACATGCGTACGTGTTTGTAAATCTTAAAAGTAAGAATGGAAGATGAAATTTTATTGAAGATACTAAAACTTCACTTCCTCTCCCATTAGATAATCATTTGTTATAGGTCTTGAGCTAATTTCAAGATAGAGCAGGTTTTAGTTACATTTAAGAAATTGATCTTTTGAGTTGAGTAATTATTGGTGATTAATTATTAAATCGTCCATCGATCTAAAAATCTAAAAACTTAAATGGTTATCAATATAGTATTCGAATTCAAAATCACTTGCTCCATACCATGTTTAGCTTAAGCGAATGGATTGGAATAAATTTAATTATATTAATATAGTGTTCAAAATTCAAATCTCATGTTAAATAAGCCATCAACTCAAAAACAAGTTGGAGTACTAAATTTAATTATACGCCAACATTAATTCATTAAACATTTGGTTTTGATTGAAATCTGGGTTTTGGTTCTTGCAGTCGCTGTGCAATGCATGTGGGATTAGATACAGGAAACTGAAGAACAATATTAATGGCGGAGTGATTAAGAGCGGAAAGGGGAAGAATAGGGGAGGAGGATCGTTGAAGATGAGAGTGGTGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCTACGGCGATGGCGGAAAATGGAGTTGCAGAAGTGATCGGAGAAGAAGAACAGGCAGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATTTATCTTAA

mRNA sequence

ATGGCTAATTTCCAGTTGCAGTTCTTCATGGACCGCTCAGATCTCTCAGCTGGCTCGACCTTCAATAATCAATCATCTTCTGATCTAATGCCCATCTCCAACCACAGAACCTGCGTCCACTGTCGCACCACCACCACCCCCCTCTGGAGAACCGGTCCCGCCGGCCCAAGGTCGCTGTGCAATGCATGTGGGATTAGATACAGGAAACTGAAGAACAATATTAATGGCGGAGTGATTAAGAGCGGAAAGGGGAAGAATAGGGGAGGAGGATCGTTGAAGATGAGAGTGGTGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCTACGGCGATGGCGGAAAATGGAGTTGCAGAAGTGATCGGAGAAGAAGAACAGGCAGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATTTATCTTAA

Coding sequence (CDS)

ATGGCTAATTTCCAGTTGCAGTTCTTCATGGACCGCTCAGATCTCTCAGCTGGCTCGACCTTCAATAATCAATCATCTTCTGATCTAATGCCCATCTCCAACCACAGAACCTGCGTCCACTGTCGCACCACCACCACCCCCCTCTGGAGAACCGGTCCCGCCGGCCCAAGGTCGCTGTGCAATGCATGTGGGATTAGATACAGGAAACTGAAGAACAATATTAATGGCGGAGTGATTAAGAGCGGAAAGGGGAAGAATAGGGGAGGAGGATCGTTGAAGATGAGAGTGGTGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCTACGGCGATGGCGGAAAATGGAGTTGCAGAAGTGATCGGAGAAGAAGAACAGGCAGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATTTATCTTAA

Protein sequence

MANFQLQFFMDRSDLSAGSTFNNQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRATAMAENGVAEVIGEEEQAAAMLLMALSSGYLS

Homology

[Close]

BLAST of Tan0009993 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 5.6e-18
Identity = 63/132 (47.73%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 10  MDRSDLSAGSTFNNQSSSDLMPISNH-RTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYR 69
           M+    S  +   + SSS    ISN  ++C  C T+ TPLWR GPAGP+SLCNACGIR R
Sbjct: 14  MESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNR 73

Query: 70  KLKNNI--NGGVIKSGKGKNRG---GGSLKMRVVGFGREIVLHRATAMAENGVAEVIGEE 129
           K +  +  N    K  K  NR    G SLK R++  GRE+++ R+T  AEN     +GEE
Sbjct: 74  KKRRTLISNRSEDKKKKSHNRNPKFGDSLKQRLMELGREVMMQRST--AENQRRNKLGEE 133

Query: 130 EQAAAMLLMALS 136
           EQ AA+LLMALS
Sbjct: 134 EQ-AAVLLMALS 142

[Close]

BLAST of Tan0009993 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 22  NNQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRK-----LKNNING 81
           NN S +D       +TC  C T+ TPLWR GP GP+SLCNACGIR RK      ++N   
Sbjct: 27  NNTSVND-----KKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKL 86

Query: 82  GVIKSGKGKNRGGGSLKMRVVGFGREIVLHRATAMAENGVAEVIGEEEQAAAMLLMALSS 138
               SG G  + G SLK  ++  G   +  R+T   +    + +GEEEQ AA+LLMALS 
Sbjct: 87  KKSSSGGGNRKFGESLKQSLMDLG---IRKRSTVEKQR---QKLGEEEQ-AAVLLMALSY 135

[Close]

BLAST of Tan0009993 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09
Identity = 37/78 (47.44%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 10 MDRSDLSAGSTFNNQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRK 69
          +D  + S+  +    SS D       RTCV C T  TPLWR GPAGP+SLCNACGI+ RK
Sbjct: 21 VDNENCSSSGSGGGSSSGD-----TKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRK 80

Query: 70 LKNNINGGVIKSGKGKNR 88
           K     G+    K KNR
Sbjct: 81 -KRQAALGMRSEEKKKNR 92

[Close]

BLAST of Tan0009993 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 3.6e-09
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 36  RTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRK 70
           R C +C TT+TPLWR GP GP+SLCNACGIR++K
Sbjct: 152 RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKK 185

[Close]

BLAST of Tan0009993 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 4.7e-09
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0


Query: 36  RTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRK 70
           R C +C T +TPLWR GP GP+SLCNACGIRY+K
Sbjct: 152 RRCANCGTASTPLWRNGPRGPKSLCNACGIRYKK 185

[Close]

BLAST of Tan0009993 vs. NCBI nr
Match: XP_023515141.1 (GATA transcription factor 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.4 bits (407), Expect = 5.7e-36
Identity = 97/146 (66.44%), Postives = 105/146 (71.92%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFNNQSSSDLMPISNH----------RTCVHCRTTTTPLWRTGPAG 65
           + FF++     +GSTFN    S LM ISNH          RTC HCRTT TPLWR GPAG
Sbjct: 1   MAFFINNHPDLSGSTFN---PSSLMAISNHGLLCIEPQKQRTCHHCRTTRTPLWRAGPAG 60

Query: 66  PRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRAT-AMAEN 125
           PRSLCNACGIRYRKLKN+ NGGV KSG GK        +RVV  GREI+LHRAT AMAEN
Sbjct: 61  PRSLCNACGIRYRKLKNS-NGGVNKSGNGKK------VVRVVDLGREIMLHRATAAMAEN 120

Query: 126 GVAEVIGEEEQAAAMLLMALSSGYLS 141
           G AE IGEEEQAAAMLLMALSSGY+S
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]

BLAST of Tan0009993 vs. NCBI nr
Match: XP_023004687.1 (GATA transcription factor 15-like [Cucurbita maxima])

HSP 1 Score: 161.4 bits (407), Expect = 5.7e-36
Identity = 97/146 (66.44%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFNNQSSSDLMPISN----------HRTCVHCRTTTTPLWRTGPAG 65
           + FF++     +GSTFN    S LM ISN           RTC HCRTT TPLWR GPAG
Sbjct: 1   MAFFINNHPDLSGSTFN---PSSLMAISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAG 60

Query: 66  PRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRAT-AMAEN 125
           PRSLCNACGIRYRKLKNN NGGV KSG GK        +RVVG GREI+LHR T AMAEN
Sbjct: 61  PRSLCNACGIRYRKLKNN-NGGVNKSGNGKK------VVRVVGLGREIMLHRTTAAMAEN 120

Query: 126 GVAEVIGEEEQAAAMLLMALSSGYLS 141
           G AE IGEEEQAAAMLLMALSSGY+S
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]

BLAST of Tan0009993 vs. NCBI nr
Match: XP_022959984.1 (GATA transcription factor 15-like [Cucurbita moschata] >KAG6593223.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030201.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157.5 bits (397), Expect = 8.2e-35
Identity = 96/146 (65.75%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFNNQSSSDLMPISN----------HRTCVHCRTTTTPLWRTGPAG 65
           + FF++     +GSTFN    S LM ISN           RTC HCRTT TPLWR GPAG
Sbjct: 1   MAFFINNHPDLSGSTFN---PSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAG 60

Query: 66  PRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRAT-AMAEN 125
           PRSLCNACGIRYRKLKN+ NGGV KS  GK        +RVVG GREI+LHRAT AMAEN
Sbjct: 61  PRSLCNACGIRYRKLKNS-NGGVNKSVNGKK------VVRVVGLGREIMLHRATAAMAEN 120

Query: 126 GVAEVIGEEEQAAAMLLMALSSGYLS 141
           G AE IGEEEQAAAMLLMALSSGY+S
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]

BLAST of Tan0009993 vs. NCBI nr
Match: KAA0046674.1 (GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA transcription factor 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 147.9 bits (372), Expect = 6.5e-32
Identity = 88/154 (57.14%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFN-------NQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRS 65
           + F M+R+   + STFN       ++     +     R CVHCR T TPLWR GPAGPRS
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPRS 72

Query: 66  LCNACGIRYRKLK---------NNINGGVIKSGKGKNR-GGGSLKMRVVGFGREIVLHR- 125
           LCNACGIRYRK+K         NN N    K GKGK   GGGSLK+RVV  GREI++HR 
Sbjct: 73  LCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGGGGSLKLRVVRLGREIMVHRR 132

Query: 126 -ATAMAENGVAEVIGEEEQAAAMLLMALSSGYLS 141
             TAM +NGVAE IGEEEQ AAMLLMALSSGY+S
Sbjct: 133 PTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 166

[Close]

BLAST of Tan0009993 vs. NCBI nr
Match: XP_008451515.1 (PREDICTED: GATA transcription factor 15-like [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31
Identity = 88/158 (55.70%), Postives = 101/158 (63.92%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFN-------NQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRS 65
           + F M+R+   + STFN       ++     +     R CVHCR T TPLWR GPAGPRS
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPRS 72

Query: 66  LCNACGIRYRKLK-------------NNINGGVIKSGKGKNR-GGGSLKMRVVGFGREIV 125
           LCNACGIRYRK+K             NN N    K GKGK   GGGSLK+RVV  GREI+
Sbjct: 73  LCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMGGGGSLKLRVVRLGREIM 132

Query: 126 LHR--ATAMAENGVAEVIGEEEQAAAMLLMALSSGYLS 141
           +HR   TAM +NGVAE IGEEEQ AAMLLMALSSGY+S
Sbjct: 133 VHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 170

[Close]

BLAST of Tan0009993 vs. ExPASy TrEMBL
Match: A0A6J1KR45 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.8e-36
Identity = 97/146 (66.44%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFNNQSSSDLMPISN----------HRTCVHCRTTTTPLWRTGPAG 65
           + FF++     +GSTFN    S LM ISN           RTC HCRTT TPLWR GPAG
Sbjct: 1   MAFFINNHPDLSGSTFN---PSSLMAISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAG 60

Query: 66  PRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRAT-AMAEN 125
           PRSLCNACGIRYRKLKNN NGGV KSG GK        +RVVG GREI+LHR T AMAEN
Sbjct: 61  PRSLCNACGIRYRKLKNN-NGGVNKSGNGKK------VVRVVGLGREIMLHRTTAAMAEN 120

Query: 126 GVAEVIGEEEQAAAMLLMALSSGYLS 141
           G AE IGEEEQAAAMLLMALSSGY+S
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]

BLAST of Tan0009993 vs. ExPASy TrEMBL
Match: A0A6J1H9M3 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35
Identity = 96/146 (65.75%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFNNQSSSDLMPISN----------HRTCVHCRTTTTPLWRTGPAG 65
           + FF++     +GSTFN    S LM ISN           RTC HCRTT TPLWR GPAG
Sbjct: 1   MAFFINNHPDLSGSTFN---PSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAG 60

Query: 66  PRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRAT-AMAEN 125
           PRSLCNACGIRYRKLKN+ NGGV KS  GK        +RVVG GREI+LHRAT AMAEN
Sbjct: 61  PRSLCNACGIRYRKLKNS-NGGVNKSVNGKK------VVRVVGLGREIMLHRATAAMAEN 120

Query: 126 GVAEVIGEEEQAAAMLLMALSSGYLS 141
           G AE IGEEEQAAAMLLMALSSGY+S
Sbjct: 121 GGAETIGEEEQAAAMLLMALSSGYVS 136

[Close]

BLAST of Tan0009993 vs. ExPASy TrEMBL
Match: A0A5A7TUD0 (GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001480 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.2e-32
Identity = 88/154 (57.14%), Postives = 101/154 (65.58%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFN-------NQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRS 65
           + F M+R+   + STFN       ++     +     R CVHCR T TPLWR GPAGPRS
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPRS 72

Query: 66  LCNACGIRYRKLK---------NNINGGVIKSGKGKNR-GGGSLKMRVVGFGREIVLHR- 125
           LCNACGIRYRK+K         NN N    K GKGK   GGGSLK+RVV  GREI++HR 
Sbjct: 73  LCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGGGGSLKLRVVRLGREIMVHRR 132

Query: 126 -ATAMAENGVAEVIGEEEQAAAMLLMALSSGYLS 141
             TAM +NGVAE IGEEEQ AAMLLMALSSGY+S
Sbjct: 133 PTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 166

[Close]

BLAST of Tan0009993 vs. ExPASy TrEMBL
Match: A0A1S3BSR7 (GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 9.2e-32
Identity = 88/158 (55.70%), Postives = 101/158 (63.92%), Query Frame = 0


Query: 6   LQFFMDRSDLSAGSTFN-------NQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRS 65
           + F M+R+   + STFN       ++     +     R CVHCR T TPLWR GPAGPRS
Sbjct: 13  MAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCRATRTPLWRAGPAGPRS 72

Query: 66  LCNACGIRYRKLK-------------NNINGGVIKSGKGKNR-GGGSLKMRVVGFGREIV 125
           LCNACGIRYRK+K             NN N    K GKGK   GGGSLK+RVV  GREI+
Sbjct: 73  LCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMGGGGSLKLRVVRLGREIM 132

Query: 126 LHR--ATAMAENGVAEVIGEEEQAAAMLLMALSSGYLS 141
           +HR   TAM +NGVAE IGEEEQ AAMLLMALSSGY+S
Sbjct: 133 VHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYVS 170

[Close]

BLAST of Tan0009993 vs. ExPASy TrEMBL
Match: A0A0A0K6B1 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.9e-30
Identity = 91/154 (59.09%), Postives = 102/154 (66.23%), Query Frame = 0


Query: 6   LQFFMDR-SDLSAGSTFNNQSSSDL--------MPISNHRTCVHCRTTTTPLWRTGPAGP 65
           + F M+R +DLSA STFN  S            +     R CVHCR T TPLWR GPAGP
Sbjct: 17  IAFLMNRAADLSA-STFNPPSLMTAVSKEGLLELEAEKQRACVHCRATRTPLWRAGPAGP 76

Query: 66  RSLCNACGIRYRKLK--NNINGGV-----IKSGKGKNRG--GGSLKMRVVGFGREIVLHR 125
           RSLCNACGIRYRK+K  +N NGGV      K GKGK  G  GGSLK+RVV  GREI++HR
Sbjct: 77  RSLCNACGIRYRKMKMNSNNNGGVNNNSNNKMGKGKKMGGSGGSLKVRVVRLGREIMVHR 136

Query: 126 ATAMAE--NGVAEVIGEEEQAAAMLLMALSSGYL 140
            T   E  N VAE IGEEEQ AA+LLMALSSGY+
Sbjct: 137 PTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 169

[Close]

BLAST of Tan0009993 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 92.0 bits (227), Expect = 4.0e-19
Identity = 63/132 (47.73%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 10  MDRSDLSAGSTFNNQSSSDLMPISNH-RTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYR 69
           M+    S  +   + SSS    ISN  ++C  C T+ TPLWR GPAGP+SLCNACGIR R
Sbjct: 14  MESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNR 73

Query: 70  KLKNNI--NGGVIKSGKGKNRG---GGSLKMRVVGFGREIVLHRATAMAENGVAEVIGEE 129
           K +  +  N    K  K  NR    G SLK R++  GRE+++ R+T  AEN     +GEE
Sbjct: 74  KKRRTLISNRSEDKKKKSHNRNPKFGDSLKQRLMELGREVMMQRST--AENQRRNKLGEE 133

Query: 130 EQAAAMLLMALS 136
           EQ AA+LLMALS
Sbjct: 134 EQ-AAVLLMALS 142

[Close]

BLAST of Tan0009993 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 74.3 bits (181), Expect = 8.5e-14
Identity = 53/121 (43.80%), Postives = 68/121 (56.20%), Query Frame = 0


Query: 22  NNQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRK-----LKNNING 81
           NN S +D       +TC  C T+ TPLWR GP GP+SLCNACGIR RK      ++N   
Sbjct: 27  NNTSVND-----KKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKL 86

Query: 82  GVIKSGKGKNRGGGSLKMRVVGFGREIVLHRATAMAENGVAEVIGEEEQAAAMLLMALSS 138
               SG G  + G SLK  ++  G   +  R+T   +    + +GEEEQ AA+LLMALS 
Sbjct: 87  KKSSSGGGNRKFGESLKQSLMDLG---IRKRSTVEKQR---QKLGEEEQ-AAVLLMALSY 135

[Close]

BLAST of Tan0009993 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 64.7 bits (156), Expect = 6.8e-11
Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 11  DRSDLSAGSTFNNQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRKL 70
           D SD+  G+  ++ S  D       +TCV C T+ TPLWR GPAGP+SLCNACGI+ RK 
Sbjct: 17  DSSDVDNGNCSSSGSGGD-----TKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKK 76

Query: 71  KN---NINGGVIKSGKGKNRGGGSLKMRVVGFGREIVLHRATAMAENGVAEV 120
           +     I    IK  K K+     L+ R V  G+   ++   A  E G+ ++
Sbjct: 77  RQAALGIRQDDIKI-KSKSNNNLGLESRNVKTGKGEPVNVKIAKCEPGIVKI 122

[Close]

BLAST of Tan0009993 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 37/78 (47.44%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 10 MDRSDLSAGSTFNNQSSSDLMPISNHRTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRK 69
          +D  + S+  +    SS D       RTCV C T  TPLWR GPAGP+SLCNACGI+ RK
Sbjct: 21 VDNENCSSSGSGGGSSSGD-----TKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRK 80

Query: 70 LKNNINGGVIKSGKGKNR 88
           K     G+    K KNR
Sbjct: 81 -KRQAALGMRSEEKKKNR 92

[Close]

BLAST of Tan0009993 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10
Identity = 28/56 (50.00%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 36  RTCVHCRTTTTPLWRTGPAGPRSLCNACGIRYRKLKNNINGGVIKSGKGKNRGGGS 92
           R C +C TT+TPLWR GP GP+SLCNACGIR++K +   +     + +    GGGS
Sbjct: 75  RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRAS-----TARNSTSGGGS 125

The following BLAST results are available for this feature:

BLAST of Tan0009993 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG10	5.6e-18	47.73	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9FJ10	1.2e-12	43.80	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q9LIB5	2.1e-09	47.44	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q8LC79	3.6e-09	70.59	GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2	[more]
B8AX51	4.7e-09	70.59	GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE...	[more]

BLAST of Tan0009993 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515141.1	5.7e-36	66.44	GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004687.1	5.7e-36	66.44	GATA transcription factor 15-like [Cucurbita maxima]	[more]
XP_022959984.1	8.2e-35	65.75	GATA transcription factor 15-like [Cucurbita moschata] >KAG6593223.1 GATA transc...	[more]
KAA0046674.1	6.5e-32	57.14	GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA tr...	[more]
XP_008451515.1	1.9e-31	55.70	PREDICTED: GATA transcription factor 15-like [Cucumis melo]	[more]

BLAST of Tan0009993 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR45	2.8e-36	66.44	GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE...	[more]
A0A6J1H9M3	4.0e-35	65.75	GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 ...	[more]
A0A5A7TUD0	3.2e-32	57.14	GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BSR7	9.2e-32	55.70	GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 S...	[more]
A0A0A0K6B1	3.9e-30	59.09	GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 P...	[more]

BLAST of Tan0009993 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06740.1	4.0e-19	47.73	GATA transcription factor 15	[more]
AT5G49300.1	8.5e-14	43.80	GATA transcription factor 16	[more]
AT4G16141.1	6.8e-11	38.39	GATA type zinc finger transcription factor family protein	[more]
AT3G16870.1	1.5e-10	47.44	GATA transcription factor 17	[more]
AT4G36620.1	3.4e-10	50.00	GATA transcription factor 19	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 32..83 e-value: 1.7E-12 score: 57.5
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 38..70 e-value: 8.3E-17 score: 60.5
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 38..63
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 32..68 score: 13.164715
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 37..87 e-value: 5.74237E-17 score: 67.783
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 33..96 e-value: 6.7E-17 score: 63.3
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 23..138
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 31..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009993.1	Tan0009993.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding