Tan0009967 (gene) Snake gourd v1

Overview


Name	Tan0009967
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ferredoxin
Location	LG05: 54147814 .. 54149484 (-)
RNA-Seq Expression	Tan0009967
Synteny	Tan0009967

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCCACATGGGAATGAGGGTCTTCAAAATGTTGAAAAAAGTCAGAGATGGGGAACTACGTTGATAAAGAGCAAAAGGGACTGTCTCTTGGAAGCTTGCAAATGGCAAAATTTCCCCTTCCCTCTTCTTCTACCTATTGTGGGCTTTCAGCAGATGCCAAAAGGCAAAAGCCAATTTTTCTCTCTTTTTCTCTCATGTTATATTATATATAAATATAATACATTTCCATATTCAAGGACTAGGGTTACGCTGCGTTTTATTTTGTAGCTTCGCTTTCTCCGCTGCCTCCACCGTCTTCATCTCTCTCTCTCTCTCTCTCTGTAAGCTTTTTTTTATTCATCTCTGGGTTTTCTCTCTGATTGCTTTCTGGGTATGATTGAGCTTTTTGTTTTGTGATATATATTTGGGTAAGCAGATTCTTCTTCCACTTTGAACTCTGTTGAGATTTTATTTTAACCCAACGGCAGTGAGAATCTGATATCATTTTATTTGGCTGTAATTATTACTTTAGTTTATGGAGCTTCGAGTGAAGAGCACAAAAAGCCATTAGGCTGCATCTTCTCATAATGCTCCATACATCAATTGCCTCCATAAACACAATGAATAGCTTTACTGCTACTCATGTTCTCTTTTCAAGAGGCATACAAAATACCTAAATCCTATTGGTAGACTATTTTCTTAATTTAAAGAATGGATGCCCAGTTTTCACACAATCGCTCCATTCCATTACAAACCAAAATGAAGAAAATTACCATGTTCAGTTTGCACTTTTTCTGCCACCAGACTATGACTATGACTATGACTATTTCTATTTTCTATTTTCTATTTTCCATTGAATTGCAAAAGAATATGAAGAAAATGGTATTGGAATTTTCTTACTTACATGTTCATTTCTTACTTGCTTTTAGCTTTTGGTTGATTTGTAAACCACACCAATTTAAATATGATTTAGGAGCAGAAATGTCAACCATGTCAACTGCAACGCTTCCTTCCCGCTTCATGTCGAACGAGCCGTGTAAAGACCAATACAAAAGCACCATTATCAAGTGTCCGTCTTCTATCGGATCGACGAGCAACATTTCGAAATCCTTTGGCTTGAAATCATCTCCTTCATTCAGAACCACTGCAATGGCAGTTTACAAGATTAAACTTGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACCTTCCTTATTCGTGCAGGGCAGGCGCGTGTTCTACGTGCGCTGGGAAAATTGTTTCGGGTTCAGTCGATCAGTCGGACGGGTCGTTCCTCGATGATAGTCAAATGGCAGAGGGCTATTTGTTAACCTGTGTTTCACACCCAACTGCAGACTGTGTGATTCACACACACAAGGAAGAAGAACTGATATGAGTATTATATAGCACGTTTAAGTAATAAGAGTGTCTTCCTTTTTCTTTTATGGGTTGTAGTTTTGATTTGTAATGTGATATTCTAAAATAAAAACAAATATAAAATCGTATATGTGAATGTACCTGTACTGTACTGTATAGACAGGGACTTCTACCGAAATGCCTTTAAGCCTTTAAATACTCAGTCGTATATCTATTTTTGTACTCTCTTCGTGATGCAAATTTTATAAAATATAAGAGCTCTGTT

mRNA sequence

GGGCCACATGGGAATGAGGGTCTTCAAAATGTTGAAAAAAGTCAGAGATGGGGAACTACGTTGATAAAGAGCAAAAGGGACTGTCTCTTGGAAGCTTGCAAATGGCAAAATTTCCCCTTCCCTCTTCTTCTACCTATTGTGGGCTTTCAGCAGATGCCAAAAGGCAAAAGCCAATTTTTCTCTCTTTTTCTCTCATGTTATATTATATATAAATATAATACATTTCCATATTCAAGGACTAGGGTTACGCTGCGTTTTATTTTGTAGCTTCGCTTTCTCCGCTGCCTCCACCGTCTTCATCTCTCTCTCTCTCTCTCTCTGAGCAGAAATGTCAACCATGTCAACTGCAACGCTTCCTTCCCGCTTCATGTCGAACGAGCCGTGTAAAGACCAATACAAAAGCACCATTATCAAGTGTCCGTCTTCTATCGGATCGACGAGCAACATTTCGAAATCCTTTGGCTTGAAATCATCTCCTTCATTCAGAACCACTGCAATGGCAGTTTACAAGATTAAACTTGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACCTTCCTTATTCGTGCAGGGCAGGCGCGTGTTCTACGTGCGCTGGGAAAATTGTTTCGGGTTCAGTCGATCAGTCGGACGGGTCGTTCCTCGATGATAGTCAAATGGCAGAGGGCTATTTGTTAACCTGTGTTTCACACCCAACTGCAGACTGTGTGATTCACACACACAAGGAAGAAGAACTGATATGAGTATTATATAGCACGTTTAAGTAATAAGAGTGTCTTCCTTTTTCTTTTATGGGTTGTAGTTTTGATTTGTAATGTGATATTCTAAAATAAAAACAAATATAAAATCGTATATGTGAATGTACCTGTACTGTACTGTATAGACAGGGACTTCTACCGAAATGCCTTTAAGCCTTTAAATACTCAGTCGTATATCTATTTTTGTACTCTCTTCGTGATGCAAATTTTATAAAATATAAGAGCTCTGTT

Coding sequence (CDS)

ATGTCAACCATGTCAACTGCAACGCTTCCTTCCCGCTTCATGTCGAACGAGCCGTGTAAAGACCAATACAAAAGCACCATTATCAAGTGTCCGTCTTCTATCGGATCGACGAGCAACATTTCGAAATCCTTTGGCTTGAAATCATCTCCTTCATTCAGAACCACTGCAATGGCAGTTTACAAGATTAAACTTGTTGAACCATGTGGGAAAGAGCATGAGTTTGAGGCATCTGATGATACTTACATTCTTGATGCAGCTGAAGAAGCAGGAGTTGACCTTCCTTATTCGTGCAGGGCAGGCGCGTGTTCTACGTGCGCTGGGAAAATTGTTTCGGGTTCAGTCGATCAGTCGGACGGGTCGTTCCTCGATGATAGTCAAATGGCAGAGGGCTATTTGTTAACCTGTGTTTCACACCCAACTGCAGACTGTGTGATTCACACACACAAGGAAGAAGAACTGATATGA

Protein sequence

MSTMSTATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI

Homology

[Close]

BLAST of Tan0009967 vs. ExPASy Swiss-Prot
Match: P27788 (Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 90/132 (68.18%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 22  QYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVYKIKLVEPCGKEHEFEASDDTY 81
           Q   T +K PSS+   S ++K   LK+S     +AMAVYK+KLV P G+EHEF+A DD Y
Sbjct: 20  QASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAY 79

Query: 82  ILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTA 141
           ILDAAE AGV+LPYSCRAGACSTCAGKI SGSVDQSDGSFLDD Q  EGY+LTCVS+P +
Sbjct: 80  ILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKS 139

Query: 142 DCVIHTHKEEEL 154
           DCVIHTHKE +L
Sbjct: 140 DCVIHTHKEGDL 151

[Close]

BLAST of Tan0009967 vs. ExPASy Swiss-Prot
Match: Q9ZQG8 (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 94/154 (61.04%), Postives = 116/154 (75.32%), Query Frame = 0


Query: 4   MSTATLPSRFMSNEPCKDQYKSTIIKCPS---SIGSTSNISKSFGLK-SSPSFRTTAMAV 63
           M+T  + S  M+    + Q  + +I   S   S+GST  +S+SFGLK S+ S   T  AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEEL 154
           SFL+DS + +GY+LTCV++P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Tan0009967 vs. ExPASy Swiss-Prot
Match: P94044 (Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-40
Identity = 87/154 (56.49%), Postives = 110/154 (71.43%), Query Frame = 0


Query: 4   MSTATLPSRFMSNEPCKDQYKSTIIKCPSSI---GSTSNISKSFGLKSSPSFRTTAMAV- 63
           MSTAT P            Y++T     +++   G     +++ G + S  F  +A AV 
Sbjct: 1   MSTATAPRLPAPRSGASYHYQTTAAPAANTLSFAGHARQAARASGPRLSSRFVASAAAVL 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           +K+KLV P G EHEFEA DDTYIL+AAE AGV+LP+SCRAG+CSTCAG++ +G VDQS+G
Sbjct: 61  HKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEG 120

Query: 124 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEEL 154
           SFLDD QMAEGYLLTC+S+P ADCVIHTHKEE+L
Sbjct: 121 SFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDL 154

[Close]

BLAST of Tan0009967 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.1e-38
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 38  SNISKSFGLKSSPS--FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 97
           +N    FGLKSS +   R TAMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 98  SCRAGACSTCAGKIVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           SCRAG+CS+CAGK+VSGS+DQSD SFLDD QM+EGY+LTCV++PT+D VI THKEE ++
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

[Close]

BLAST of Tan0009967 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.5e-37
Identity = 85/154 (55.19%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 2   STMSTATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKS-FGLKSSPS-FRTTAMAV 61
           + +S AT+ + F    P            P +    +N+ ++ FGLKSS S  R TAMA 
Sbjct: 6   AALSGATMSTAFAPKTP------------PMTAALPTNVGRALFGLKSSASRGRVTAMAA 65

Query: 62  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDG 121
           YK+ LV P GK+ E E  DD YILDAAEEAG+DLPYSCRAG+CS+CAGK+ SGSV+Q DG
Sbjct: 66  YKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDG 125

Query: 122 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEEL 154
           SFLDD Q+ EG++LTCV++PT D  I THKEEEL
Sbjct: 126 SFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146

[Close]

BLAST of Tan0009967 vs. NCBI nr
Match: XP_022142635.1 (ferredoxin, root R-B2 [Momordica charantia])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVY 60
           MSTMSTATLPSRF  N PCK++Y+ TIIKCPSSIGS SNIS+SFGLKSSPSFRT+AMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           FLDD+QMAEGYLLTCVS PTADCVIHTHKE ELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of Tan0009967 vs. NCBI nr
Match: XP_022944832.1 (uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 3.9e-70
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSN--EPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMA 60
           MSTMSTA LPSR M N   PCK+Q++STIIKCPSSIGSTSNISKSFGLKSSPS RTTAMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of Tan0009967 vs. NCBI nr
Match: XP_022944833.1 (uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 3.9e-70
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSN--EPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMA 60
           MSTMSTA LPSR M N   PCK+Q++STIIKCPSSIGSTSNISKSFGLKSSPS RTTAMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of Tan0009967 vs. NCBI nr
Match: KAG6573622.1 (Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.4 bits (690), Expect = 9.6e-69
Identity = 135/153 (88.24%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 4   MSTATLPSRFMSN--EPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVYK 63
           MSTA LPSR M N   PCK+Q++STIIKCPSSIGSTSNISKSFGLKSSPS RTTAMAVYK
Sbjct: 1   MSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMAVYK 60

Query: 64  IKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGSF 123
           IKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSDGSF
Sbjct: 61  IKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSDGSF 120

Query: 124 LDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           LDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 LDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 153

[Close]

BLAST of Tan0009967 vs. NCBI nr
Match: XP_023541284.1 (ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.4 bits (690), Expect = 9.6e-69
Identity = 136/156 (87.18%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSN--EPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMA 60
           MSTMSTA LPSR M N   PCK+Q++S+IIKCPSSIGSTSNISKSFGLKSS S RTTAMA
Sbjct: 41  MSTMSTAKLPSRTMFNTSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSSSSSRTTAMA 100

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 101 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 160

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 161 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 196

[Close]

BLAST of Tan0009967 vs. ExPASy TrEMBL
Match: A0A6J1CLH4 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.3e-73
Identity = 140/154 (90.91%), Postives = 147/154 (95.45%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVY 60
           MSTMSTATLPSRF  N PCK++Y+ TIIKCPSSIGS SNIS+SFGLKSSPSFRT+AMAVY
Sbjct: 1   MSTMSTATLPSRFTLNAPCKNRYRITIIKCPSSIGSASNISRSFGLKSSPSFRTSAMAVY 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGK+VSGSVDQSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKVVSGSVDQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           FLDD+QMAEGYLLTCVS PTADCVIHTHKE ELI
Sbjct: 121 FLDDTQMAEGYLLTCVSLPTADCVIHTHKEGELI 154

[Close]

BLAST of Tan0009967 vs. ExPASy TrEMBL
Match: A0A6J1FZ83 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSN--EPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMA 60
           MSTMSTA LPSR M N   PCK+Q++STIIKCPSSIGSTSNISKSFGLKSSPS RTTAMA
Sbjct: 64  MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 123

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 124 VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 183

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 184 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 219

[Close]

BLAST of Tan0009967 vs. ExPASy TrEMBL
Match: A0A6J1FZ54 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 138/156 (88.46%), Postives = 145/156 (92.95%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSN--EPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMA 60
           MSTMSTA LPSR M N   PCK+Q++STIIKCPSSIGSTSNISKSFGLKSSPS RTTAMA
Sbjct: 1   MSTMSTAKLPSRTMFNTSAPCKNQFRSTIIKCPSSIGSTSNISKSFGLKSSPSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of Tan0009967 vs. ExPASy TrEMBL
Match: A0A6J1HTH8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68
Identity = 135/156 (86.54%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSNE--PCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMA 60
           MSTMSTA LPSR M N   PCK+Q++S+IIKCPSSIGSTSNISKSFGLKS  S RTTAMA
Sbjct: 1   MSTMSTAKLPSRTMFNRSAPCKNQFRSSIIKCPSSIGSTSNISKSFGLKSLHSSRTTAMA 60

Query: 61  VYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSD 120
           VYKIKL+EPCGKEHEFEASDDTYILDAAEEAG+DLPYSCRAGACSTCAGK VSGSVDQSD
Sbjct: 61  VYKIKLIEPCGKEHEFEASDDTYILDAAEEAGIDLPYSCRAGACSTCAGKFVSGSVDQSD 120

Query: 121 GSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           GSFLDDSQM EGYLLTC+SHPT+DCVI THKE ELI
Sbjct: 121 GSFLDDSQMEEGYLLTCISHPTSDCVILTHKEGELI 156

[Close]

BLAST of Tan0009967 vs. ExPASy TrEMBL
Match: A0A5A7SWN7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.3e-66
Identity = 133/154 (86.36%), Postives = 138/154 (89.61%), Query Frame = 0


Query: 1   MSTMSTATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVY 60
           MSTMSTA LP+ FM N   K+Q  STIIKCPSSIGST NI KSFGL S PSFR  AMAV+
Sbjct: 1   MSTMSTAKLPTHFMYNTQSKNQLGSTIIKCPSSIGSTRNIWKSFGLNSRPSFRARAMAVF 60

Query: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGS 120
           KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSV+QSDGS
Sbjct: 61  KIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVNQSDGS 120

Query: 121 FLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           FLDD QMA+GYLLTCVS PTADCVIHTHKEEELI
Sbjct: 121 FLDDDQMAKGYLLTCVSLPTADCVIHTHKEEELI 154

[Close]

BLAST of Tan0009967 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 94/154 (61.04%), Postives = 116/154 (75.32%), Query Frame = 0


Query: 4   MSTATLPSRFMSNEPCKDQYKSTIIKCPS---SIGSTSNISKSFGLK-SSPSFRTTAMAV 63
           M+T  + S  M+    + Q  + +I   S   S+GST  +S+SFGLK S+ S   T  AV
Sbjct: 1   MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60

Query: 64  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDG 123
           YK+KL+ P G+E EFE  DD YILDAAEEAGVDLPYSCRAGACSTCAG+IVSG+VDQSDG
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 124 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEEL 154
           SFL+DS + +GY+LTCV++P +DCVIHTHKE EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of Tan0009967 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 157.9 bits (398), Expect = 6.5e-39
Identity = 77/119 (64.71%), Postives = 95/119 (79.83%), Query Frame = 0


Query: 38  SNISKSFGLKSSPS--FRTTAMAVYKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPY 97
           +N    FGLKSS +   R TAMA YK+K + P G E E E  +D Y+LDAAEEAG+DLPY
Sbjct: 31  ANTQSLFGLKSSTARGGRVTAMATYKVKFITPEG-EQEVECEEDVYVLDAAEEAGLDLPY 90

Query: 98  SCRAGACSTCAGKIVSGSVDQSDGSFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           SCRAG+CS+CAGK+VSGS+DQSD SFLDD QM+EGY+LTCV++PT+D VI THKEE ++
Sbjct: 91  SCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAIM 148

[Close]

BLAST of Tan0009967 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-37
Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 0


Query: 2   STMSTATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPS--FRTTAMAV 61
           + +S+A + + F+   P     +S           ++N    FGLKS  +   R TAMA 
Sbjct: 4   TALSSAIVGTSFIRRSPAPISLRSL---------PSANTQSLFGLKSGTARGGRVTAMAT 63

Query: 62  YKIKLVEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDG 121
           YK+K + P G E E E  DD Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+VSGSVDQSD 
Sbjct: 64  YKVKFITPEG-ELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQ 123

Query: 122 SFLDDSQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
           SFLDD Q+ EG++LTC ++PT+D  I THKEE+++
Sbjct: 124 SFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

[Close]

BLAST of Tan0009967 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 128.3 bits (321), Expect = 5.5e-30
Identity = 66/143 (46.15%), Postives = 93/143 (65.03%), Query Frame = 0


Query: 23  YKSTIIKCP---------SSIGSTSNISKSFGLKSSPS--FRTTAMAVYKIKLVEPCGKE 82
           Y S IIK P         + + +  N +  FGL SS     +  A    K+KL+ P G+E
Sbjct: 6   YSSYIIKIPVISRISPSQAQLTTRLNNTTYFGLSSSRGNFGKVFAKESRKVKLISPEGEE 65

Query: 83  HEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDSQMAEGY 142
            E E ++D  IL++AE AG++LPYSCR+G C TC GK+VSG VDQS GSFL++ Q+ +GY
Sbjct: 66  QEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGY 125

Query: 143 LLTCVSHPTADCVIHTHKEEELI 155
           +LTC++ P  DCV++THK+ +LI
Sbjct: 126 ILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of Tan0009967 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-17
Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 5   STATLPSRFMSNEPCKDQYKSTIIKCPSSIGSTSNISKSFGLKSSPSFRTTAMAVYKIKL 64
           ST +LP  ++SN        +T+        ST+   ++F      + R  A A YK+ +
Sbjct: 11  STISLPKPYLSNSFSFPLRNATL--------STTTNRRNF----LTTGRIIARA-YKV-V 70

Query: 65  VEPCGKEHEFEASDDTYILDAAEEAGVDLPYSCRAGACSTCAGKIVSGSVDQSDGSFLDD 124
           VE  GK  E E   D  IL  A ++G+D+PY C  G C TC  K+V+G+VDQS G  L D
Sbjct: 71  VEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQS-GGMLSD 130

Query: 125 SQMAEGYLLTCVSHPTADCVIHTHKEEELI 155
             +  GY L C S+PT+DC I    EEEL+
Sbjct: 131 DVVERGYTLLCASYPTSDCHIKMIPEEELL 145

The following BLAST results are available for this feature:

BLAST of Tan0009967 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27788	2.0e-45	68.18	Ferredoxin-3, chloroplastic OS=Zea mays OX=4577 GN=FDX3 PE=1 SV=1	[more]
Q9ZQG8	1.7e-44	61.04	Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD3 PE=1 SV=1	[more]
P94044	1.1e-40	56.49	Ferredoxin-6, chloroplastic OS=Zea mays OX=4577 GN=FDX6 PE=2 SV=1	[more]
O04090	9.1e-38	64.71	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
O04683	3.5e-37	55.19	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]

BLAST of Tan0009967 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142635.1	1.1e-72	90.91	ferredoxin, root R-B2 [Momordica charantia]	[more]
XP_022944832.1	3.9e-70	88.46	uncharacterized protein LOC111449248 isoform X1 [Cucurbita moschata]	[more]
XP_022944833.1	3.9e-70	88.46	uncharacterized protein LOC111449248 isoform X2 [Cucurbita moschata]	[more]
KAG6573622.1	9.6e-69	88.24	Ferredoxin-3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023541284.1	9.6e-69	87.18	ferredoxin-3, chloroplastic [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0009967 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLH4	5.3e-73	90.91	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111012698 PE=3 SV=1	[more]
A0A6J1FZ83	1.9e-70	88.46	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1FZ54	1.9e-70	88.46	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111449248 PE=3 SV=1	[more]
A0A6J1HTH8	2.3e-68	86.54	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111466612 PE=3 SV=1	[more]
A0A5A7SWN7	1.3e-66	86.36	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G00770 PE=...	[more]

BLAST of Tan0009967 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27510.1	1.2e-45	61.04	ferredoxin 3	[more]
AT1G10960.1	6.5e-39	64.71	ferredoxin 1	[more]
AT1G60950.1	2.7e-37	50.97	2Fe-2S ferredoxin-like superfamily protein	[more]
AT5G10000.1	5.5e-30	46.15	ferredoxin 4	[more]
AT4G14890.1	3.1e-17	38.67	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 66..140 e-value: 1.5E-21 score: 76.2
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 60..151 score: 12.898357
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 65..146 e-value: 3.35905E-32 score: 108.251
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 57..154 e-value: 4.1E-35 score: 121.5
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 58..154 e-value: 4.5E-47 score: 155.8
None	No IPR available	PANTHER	PTHR43112:SF30	FERREDOXIN-3, CHLOROPLASTIC	coord: 4..153
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 4..153
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 97..105
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 52..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009967.1	Tan0009967.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding