Tan0009913 (gene) Snake gourd v1

Overview


Name	Tan0009913
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	GATA zinc finger domain-containing protein 14-like
Location	LG06: 13170575 .. 13178712 (-)
RNA-Seq Expression	Tan0009913
Synteny	Tan0009913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGACGACGTGGAAGACGAAACGGTTCAGCTAATTCCCGTCCATCAGGTATTATATATATATATATATTTTCCGATGAATTCAGAAAGAAATTTATCATCCAATTTGATGCAGGCAGTAGGATAAACAAACGGATAATTTACTCATGGCTAAATATATAGTTTAGTTTTTTTTGCAAAGAAATAAAAAAAAAATTTACTTCCTAATATTTTTTTAAAAAATTTTAATTTGCTCACTTTGATTTTAATTTGTTATTTGCTAATTTTATTAGGTGTGTTTTTTAGTTGGAGAAACCATAGTTTTTGGAGAAAGACAAATCTTTAATTGAGTAAGTTTTGTTTTTTATTTTTATTGACCAAAATGTTGTTGGTCTTTTTAGATGTAAGTTTCTTTTTTGCATTGTTTTCGAATGGTAACCATTGAGGTTTTTTTGGTTTTATATGCACAAAAAGAGGAATTGTTGTTGGCTTTTTATACCTCTCTTTCTCTTCTTCAAAGGGAGAAGAGGAGCACTCACAAAAAAAAAAAAAAACTCTACTTCTACATTTTCCCACAATCCATTCTCAACTACAAACCCCATAGTCCAACACCTTCACAACCACAAAGATGGAGAGATTTGTAAAAAAAGAACCCTAAAATTCTATAACACAACAAATAAATCTTAGCTTAGTTGGAGGTTGCATTTGGTAGGGTTTCGTTCCAAAGATCTGCACCCCAAATAACAAGCAAGTTGGTTGTTCTTGATACCAATTTGTAGACCTTCATCTTTATTTCGAAATGTCCCTGAAAAACAATAGCTGAGTAAGAGTTTGATGAATTTTTAATTTCATTTTTGTTCTTTATTACATTTCTTCTTACTTCTATTACGATGTGAATCATTATCTATTTTATTGTAATGTTGATGCTACTAACTTTAGCTTCATCTCAATCTCTAAATGTCCGTGAAAAACAATAGTTGAGTAAGAGTTTTATGAGTTTTGTTTCCATTTTTGTTTATTACAATCTCTTCTTACTTTTATTACAATGTGAATCCTTGTCTATTTTATTGTTATGTTGATGCTTCTAACTTTATTTTGTGATTTATTTCTCCTATTTATCTACCATTTTTTCTCCATATTTCTTCTTCTCGCTCTTGAGTTCATTGTGCTAAAAAGAGAGAGAAAAAAATGAGCAAAGTATTGTGAAATAAAAAAGAAATGGTTGTATAACATACCTTACATTAGGTTAGTTTGAGTGAGTAGAGATTTGCTTCTAAAAAATGTTGTTGTCTTTATGGTGAGATAGAGAGTTTTGTTTCTCATTTGAAAAAAACCAACAAGTTGAAAAAGACAAATAAGTTGAAGAATATTTATCATTTTATTCTTTTTTTAGTACAACAACATTTGGGGATGAGGGATTCGAATCCATGATCTCTTGGTTATAAATCTTACTTGATGTTAGTTGAATTATACTCTTGTTGGCATTTATCATTTGTTTTTAGTTGATTCATCATGTTGTTAATTTCATGTGAATGATTTTTTAATTCATATTTACTTCTTATAAAAAAAATATACCGACAACGGAATCATTAAATATTTGGAAGTCCGATTTTTTAGTTTTCTTGAGGTGGGGAATTGATTCGTTGGAAGTCAAAGAACAACTCCAATACGTTGTTTTTTTTAGAAAATTTAAACATATTTATATATTATGTTTGTTTACTTATTTTCTATGAATAAATTATTATACATTTTTAATTTATCTTTTCATTACATCTACTTTCCATATGCTTAACTTTGATTTCTTTGTTTTTTTTTTTTTTGTCAACTTTGGCTTCAATAAACATCCTATATTAAAATAGTAAGATATGCATGAAGGAGAAGAAATCTAGCGGCTATAAAACTTCATCTACAAGTTTGGTGACCAACCTAAACTTGCATGTTTCTAATGAATTTGTGGAAAACCAGATTATTAAAGATGAGGTGGAAAAGTCTATCTGACTTGTGTTTTATTCATGACTCCACTTGTCTTTATAAAGAATGAATACAACTGAATAAAAACAGTATAACAAATCTCAACTAAATACAAGAGCAGTTTATTCCAATATCCCTCCCACAAGTTGGACTAAAAACATCGATGGAACCCAACTTGAATAATACAGACTTAAGGCTGGCAGATGGGAGAGCCTTGGTGAAGATGTCGGCTAGTTGGAGATGAGTTCGTATAGGTAACAATTTCATAAAACCATCTGTGACTTTCTCACGTGTGAAATGACAATCTAACTCTACATGCTTCGTGCGCTCATGAAACATTGGATTAGTCGCAATGTGTACAGTCGCCTGATTGTCACAAAATAACAGTGCAGGTCTTTGAAGTGGGACACATAAGTCTGTAAGCAAAGATGATAGCCAAGTTAATTCGCACGTGGTTAAGGCGAGGGCCCTGTATTCTGCCTCGACTGAGGAACGTGAGACAATGCTTTGCTTTTTGGATTTCCATGATATCAATTAGTTGCCCCAAAAAATGCAAGACGCCCAGTCGGAGTCAGCGAAAACTCTCAGTTGAAAAGAGTTTGTTGGCGAAATTAGAACACCCTGACCTGGAGAAGTCTTGAGGTACCGTAATAAGTGATGTGCAGCAACAAGATGAGATGCACATGGCTTGGTAACAAATTGGCTAAGTTTGTTCACTGCGAAAGTGATGTTTGGACGAGATATCGTCAAGTATATTAATCTGCCAACTAATCGCCTGTATTCAGAAGGAGTGGGAATAGGTTCTGAATCATCAAGTTGTAGCTTTAGTTTTGGATCCATGGGCACGGTCTCTGCTTTAGCTCCTAACAAACCAGTATCTTCTAAGAGCTTTAAAGTATAGTGACGTTGAGAAACAACAATACCTTTGGTAGATCGGGAAAGCTCAAGTCCTAGAAAGTACTTGAGGTCACCAATATCTTTGAGTTTAAACCTCTGGTTCAGTAGCTGTTTGAGATGAACAATGTGAGCAACATTGACTCCGGTAATGATGATGTCATCAACATATACTAAAAGGGCTACAAAATCCACACCTTGTCCACGCACAAATAAGGAATAGTCGGCTTTTGATTGTTTGAACCCGAGGGAAAGAAGAGCGTCAGAGAACTTGGCGAACCATTGTCTCAAGGCTTGCTTGAGGCCATAGATGGATTTATACAACCGGCATGCCAACTTTTGATTACTAGCTTGACTCTTCGGACTGTACCAAAGGGGTAACTCCATATAGATCTCTTCGAACAACTCACCATGTAGAAAGGCGTTATTCACGTCAAGTTGAACAAGGGGCCATTTGTAAGATACTGCCATTGTGAGTAGGACACATACAGTTACAGTTTTGGAACCGGAGCAAAGGTCTCGATGAAGTCAAGTCCTTCTTGTTAGGTGAATCCTTTTGCAACCAATCGAGCCTTGTAGAATTCAATTGAGCCATTAGCACGTTGTTTATATATCCACTTGCAGCCAATTGTGTGCTTGTTTGCCGGCAATGGGACGACAGTCCATGTGTTATTAGCTTCCATAGCATCAAGCTCAACCTGCATAGCATCTCTCCATTGGGAAAATGGCAAGGCCTGGTGATAGAATTGAGGCTCATGATGAGAAGATATGTTGATAGTTAAGGCACGAAAGGTGGGAGAAAGGTTTGTGTAGGACAGATGGTTGTGTAATGGATGTTGTGTGGATAATTTGTTGATCGAGTTAGGACTGTGGAGTAGGCTGCAATGGTAGTCTTTGAGATAAGTGGGAGGTTTTGTGGGTCGTGTGGTTTTGCGGACAATTGGTTGTAAGGTTGGAGATGCAAAGTGAATATTTAAGCTATCAGGTGAAGTGATTGTGTGCAAAGGGCAAGACAGAGTTTGGTTTTGTGTATGCAGCTCAGGAGATGTGGTAGATGACAGGTTAATGTCAATTGGCTTGGGCAGGAAGTCAGTATAGTCATGTTGTAACGTGACTGTATGGAATGGAAATATCTACTCATGGAAGATCACATTCCTATAGATGAAGAACTATCGTTTGTCTATGTCAAAGAGCTTGAAGGCTTTCATGCTTGGAGGGTATATCCAACAAACACTACTGGAGTGGCACTTGGTGAAAACTTTGTCCGATGAGCTTATTGTGTGGACGCAAAGCAGAGGCAGCCGAACACCCTCAGATTAGAGTAGTTGACAAGCTTGCCATGTAGCAATTCAAACGAAGTCTTCCATTGTAGAGCTAGAGATAGAGTCCTATTGATCAGAAACACAACTGTGAGGACACACTCACTCCAAAAGTGCAAAGGAACTCTGGATTGGAAGTACATGGCTCGAGCAACATTCAAGATGCGATGGTGTTTTCTCTCCACCACAACGTTTTGTTCAGGCCTGCCTACACATGAAAGTTGATGTACTACTCCTTTGGTGCGAAGGAATTTTTCAAATGCCAACTCAGGGGTGTTGTCAGATCTAAAAGACTTGATAATCTTGTGATACTGTGTTTCTACCATTCTAAAGAAATCAGGGATAATTTGTGAAACATCAGACTTTTGTTTGAGCATAAAGAGTCACATATGTCTACTGAAATCATCTACTAATGTAAGAAAAAAACGATGACCAACATGTGAAGAAGTAGCTAGAGGACCCCAAATATCAGTATGGATAAGATCAAACATGCTTTCTGATATATTATTATTAGATGTAAAAGCTAACCTCTTTTGTTTTTCCAAAGGACATATCTCACAAGGCAATTCATTACTAAAAACATTGTGATTAAGCATCAAAGCATCTTTCAAAATTGAAATGCGAGAGAGTGAAGGGTGGCCAAGCCTGGAATGCCATGTTGACACTGATGGATGAGCGACCGTCGAAGTTATATGTACAGGCTTGAGAATGGTAGCACTCTGGTCCCCAGTTAGAACGTATAGGCCGCCTTGTAAGTCACCCTTACCAATCATTCTCAAACTGAACTTGTCCTGAATTTGACAACAATTAGTAGAGAAAATGACAGAGACATTGGTGTTTGATGTTAAGGCACTGATAGACAATAGATTGTACTTGAATTCTGGAATAAACAAAATGTCATATAGAATTAACATTCCAAAAATAATTATAGTGCCTGCAAATTGTACAGTGATACGAGAGCTGTTAGGCAGGACAACTGAAGTAGATACTGACTCGAGATTGGTAAAAAGGCCTCGAAAAAAACAGATATGGGTTGATGCGCTAGAGTCTACGTACTACCCAATCACGTTTAATATCATGAATAGTTTAGATGGAGTACCTGCGACATGAGGGATGACTTCCCCTTCGGACTTCGTAGCTTCTAACTTGGATTGTAACATCTTGAGGATAGTATGACATTGGGCAATCGTGTATTCAGTGGATTCAACATTGGCGACTACTGCAGAATTCACCTTTTCGCTGCAGGGGTATGATTATGGGACTGGTTGTGTTGGTTTCCTCTTGACCGATACCCTGGTGGATATCCATGTATTTTGTAGCATTTATCCACTGTGTGTCTCGGAATGTTACAATGGGTGCAAAATGGGTGATTGCTTTTGTGTTGACCACGATGTTGATTGTCATTTGAGTGTGTGGGAGATTTTGTAGGAGTAGAGGTTGAAGTACTAACAGCAAGAGCAATGCTAAGGGCAGGATCAATGGACCGTTGTTCTTCTTCTTGTGCAACTAGAGAGAATGGCCTACTGACGGGTGGAGGAGGATCATAAGAAGGATCTGCTAACGGGCATGACCAAAGCTATCATTCAATCCCATCAAGAAGTTCAAAAGATATTCGAATTTAACAAAATCATCGATCGCTTGGATGCCACCACAAGTGCATTGACCACGGGTGAAAGTCGGCCGGTAGGTCGTATACTCATCCCACATACTCTTGAGTTTCGAAAAGTAGTTACAGAATCTTGATCTTGTTTCAATGTAGCCATACCTCGTTTGAGATGAAAGATTTGTGGGTCGTTCCGGTTCTGAAACCTATCCTTGAGATCTTGCCAAATTGCCTGGGCAGAATCATTGAACAAAATGCTCGATGAAATTCCTTTGGATACAGAATTGAGAATCCATGCGATTGATCACCATGTGATTGATGCGTTGCCACAGAGGAAGCAATTCGCCCGCGGGTTTTGGAATCGACCCATCGATAAATCCAATCATGTTCTTGATTGAGAGCGCAATTAGCATCGACCTGCTCCATGTGACGTAATTGTCATATGTGAGAAGCTCTGATACTAGAACAAGATTGGTGGAGTCACTATGGTGCAAGAAATACGGATTCTCAGCAATTTCACGCGAGAACTGATCTTGGCGAGAGGTGGAAGACGAAGTCAGTATGGACGCAGACGCCATGGATGGGCAAAATTAACGGAAACGTGTTATAACATATGATACCATATTAAAGATGAGGTGGAAAAGTCTATCTGACTTGTGCTTTATTCATGACTCCACTTATCCTTATAAATAATGAATACAACTGAATAAAAACAGTATAACCGATCCCAACTAAATATAAGAACGGTTTATTCCAATACAGATCAATAATGCACCAATGCTCATGGTTTTTAGGGAGAAAAGAAGAAAAAACAATAATATTTCATATTATCAAACCATCTAAAACTCTTCAATGTGCAACCCTATGCTACATCAAATTTGGATATTATATATTATTCATGACATAAAATGAACTAGGAAGTGTCATATATATGTCCATACATTATATTTAATGTTTCATTTTATATATATTTACTAGATACAGGAGTACACCAATCCCAGTCTGGAGTTGGATCGAACAAAAATAATTCTCTTCAAATAGTTAAGAAGACGAATATGATTAATGAAACTGGTCAAATTCAAGGTACTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTAGACTATAACTTTGATAATAAGATCTGGTACTAGAAAACGTTTTTTCTAAAAAAACTTAATCAATTTATCATAGGCTTATAAATTGAATGATTTAACGTAGTTCTTATTTAAGTAATATGTATTCTACATATGTGTCCTATATTTATATATATAATATATCATTGGAGGAAGAAAATAAATCAGAAGTGTGATACATGTCCTATTAAATTATATTAAAAAATATTTTATGTTATCTTTACTAGATCACAAAGTACATCAATCTCACTCTGGAGTTGGGCAAAACAATAATAATTCTCTTCAAATTCTTCACAATGGAGCTCAAGTTAATGAAATTGGTAAAATTCAAGGTATGGTAAAACTTGAACTTTATGTGTATTTTCATATAACTTATCTTGCCCTTATAACTTTAATTTTTTGATGTAGTTATGATCCAAGCATCAGGTATTTTATATATAATTTATTTGGGTAAATATTACATATATATACTTCATGGAGAAAATCAATTAGAAGTTAGATGCATATGTATACATTACATTCAATGGTTTCTTTTATCTCTTAATAGATATAAGGTACACCCAGTTGAACTGAACAACAATAATTATATTAAATCTTACAGAGGAAACACATTTAAATGAAATTTGGTAAAGTTCATAAAGTATGGTCAAGTTGAAGTAAGATTAGATAATTTATAATAAATAACTGATTAACTTGAACTTTTCAATTTATTTTTAATTTAAGGTTGTATTGTACCAAATATCAATGCATTATACAATTTAGTTTATAAGTTTGAATTTCACCTTCAACCCCTTAGTTTATTTTTAAAACTCTGTTAAAAACCAAAGTAAACAAATGGGAATTTTCTACTATTGGTGGGTCAATAATGCCCTCTTTACATGTCCCTTGGAAATAAAAAATGGTTGGAATAGGTCACTATAATGAGTTTGGTAGTTTTGTAACATTAGATGTATGAAAGAGAAATTACAAAAGTATTTCGAGTTTGGTTTTAGTAGTTATTAGAGTAGGTAGAGTATCAAATTCATATCTAACAGTTATTGAGAGGTAACGCATTATAGTCACATCATTTAATCATTGGATGAGCGGTTGATAGTACAAGGAAGATTTGAGAATGAAGGAAAATTTAGGACAATGGGAAATTTGATAATTTTCAGGTAAAGTTTTGCTTGAAAGAATGTTGACATTGCTGAAGCATGGTTCAACAAGAGAGTTTCAAGCACAAATTTACATGTGA

mRNA sequence

ATGAGTGGACGACGTGGAAGACGAAACGGTTCAGCTAATTCCCGTCCATCAGATACAGGAGTACACCAATCCCAGTCTGGAGTTGGATCGAACAAAAATAATTCTCTTCAAATAGTTAAGAAGACGAATATGATTAATGAAACTGGTCAAATTCAAGATCACAAAGTACATCAATCTCACTCTGGAGTTGGGCAAAACAATAATAATTCTCTTCAAATTCTTCACAATGGAGCTCAAGTTAATGAAATTGGTAAAATTCAAGGTAAAGTTTTGCTTGAAAGAATGTTGACATTGCTGAAGCATGGTTCAACAAGAGAGTTTCAAGCACAAATTTACATGTGA

Coding sequence (CDS)

ATGAGTGGACGACGTGGAAGACGAAACGGTTCAGCTAATTCCCGTCCATCAGATACAGGAGTACACCAATCCCAGTCTGGAGTTGGATCGAACAAAAATAATTCTCTTCAAATAGTTAAGAAGACGAATATGATTAATGAAACTGGTCAAATTCAAGATCACAAAGTACATCAATCTCACTCTGGAGTTGGGCAAAACAATAATAATTCTCTTCAAATTCTTCACAATGGAGCTCAAGTTAATGAAATTGGTAAAATTCAAGGTAAAGTTTTGCTTGAAAGAATGTTGACATTGCTGAAGCATGGTTCAACAAGAGAGTTTCAAGCACAAATTTACATGTGA

Protein sequence

MSGRRGRRNGSANSRPSDTGVHQSQSGVGSNKNNSLQIVKKTNMINETGQIQDHKVHQSHSGVGQNNNNSLQILHNGAQVNEIGKIQGKVLLERMLTLLKHGSTREFQAQIYM

Homology

[Close]

BLAST of Tan0009913 vs. NCBI nr
Match: XP_022131502.1 (GATA zinc finger domain-containing protein 14-like [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06
Identity = 40/67 (59.70%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 23  QSQSGVGSNKNNSLQIVKKTNMINETGQIQDHKV-HQSHSGVGQNNNNSLQILHNGAQVN 82
           QSQS  GSN NNS QI K      E G I+D +V HQSH  V  NNNNSLQ+  N  Q N
Sbjct: 74  QSQSQDGSNNNNSPQIAKAEAKTYEAGNIEDKEVAHQSHYEVESNNNNSLQMFGNTTQSN 133

Query: 83  EIGKIQG 89
           EIGKIQG
Sbjct: 134 EIGKIQG 140

[Close]

BLAST of Tan0009913 vs. ExPASy TrEMBL
Match: A0A6J1BR68 (GATA zinc finger domain-containing protein 14-like OS=Momordica charantia OX=3673 GN=LOC111004684 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 40/67 (59.70%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 23  QSQSGVGSNKNNSLQIVKKTNMINETGQIQDHKV-HQSHSGVGQNNNNSLQILHNGAQVN 82
           QSQS  GSN NNS QI K      E G I+D +V HQSH  V  NNNNSLQ+  N  Q N
Sbjct: 74  QSQSQDGSNNNNSPQIAKAEAKTYEAGNIEDKEVAHQSHYEVESNNNNSLQMFGNTTQSN 133

Query: 83  EIGKIQG 89
           EIGKIQG
Sbjct: 134 EIGKIQG 140

The following BLAST results are available for this feature:

BLAST of Tan0009913 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0009913 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131502.1	2.2e-06	59.70	GATA zinc finger domain-containing protein 14-like [Momordica charantia]	[more]

BLAST of Tan0009913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BR68	1.1e-06	59.70	GATA zinc finger domain-containing protein 14-like OS=Momordica charantia OX=367...	[more]

BLAST of Tan0009913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009913.1	Tan0009913.1	mRNA