Tan0009907 (gene) Snake gourd v1

Overview
NameTan0009907
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncysteine proteinase inhibitor 6-like
LocationLG07: 6296985 .. 6297454 (+)
RNA-Seq ExpressionTan0009907
SyntenyTan0009907
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTATAAAGTTTCCTTTACTTTAAACTATCAACCAAAAGTTACGATGAGTTCAGCAGTAGCCATACCTGAACAAGATTGGAAGTCGATTGAAAATATCGACCACAATCCATATGTGCAAACGATAGGAAGGTTCGCAGTAGTGGAGCATATATCTAGCTTGGCAGATATAGGAATGAAGTTCATTCGTGTGGTGAACGGTGAGACCTTGGTGGTAGTGGAGGAAGGAACGACAGAATATCGTCTTCTTTTGGAGGTGGATCAATCAGTGTGGCTACCACCTGACTTTAAAACATTTCGAAAATTATATACGACTAAGGTGCTACATCATCGAGCTAATCGCTCTTGGACACTTTTATCTTTTGTATCAACTGATCGCTCTGTCTAGCTTTAACGCTGAGTAATTTGATGACGGAATGCAAGTTGAATATAAATTATAATGCAAGAATAAAGTAAGATTATCTATGTTTTT

mRNA sequence

ATTATAAAGTTTCCTTTACTTTAAACTATCAACCAAAAGTTACGATGAGTTCAGCAGTAGCCATACCTGAACAAGATTGGAAGTCGATTGAAAATATCGACCACAATCCATATGTGCAAACGATAGGAAGGTTCGCAGTAGTGGAGCATATATCTAGCTTGGCAGATATAGGAATGAAGTTCATTCGTGTGGTGAACGGTGAGACCTTGGTGGTAGTGGAGGAAGGAACGACAGAATATCGTCTTCTTTTGGAGGTGGATCAATCAGTGTGGCTACCACCTGACTTTAAAACATTTCGAAAATTATATACGACTAAGGTGCTACATCATCGAGCTAATCGCTCTTGGACACTTTTATCTTTTGTATCAACTGATCGCTCTGTCTAGCTTTAACGCTGAGTAATTTGATGACGGAATGCAAGTTGAATATAAATTATAATGCAAGAATAAAGTAAGATTATCTATGTTTTT

Coding sequence (CDS)

ATGAGTTCAGCAGTAGCCATACCTGAACAAGATTGGAAGTCGATTGAAAATATCGACCACAATCCATATGTGCAAACGATAGGAAGGTTCGCAGTAGTGGAGCATATATCTAGCTTGGCAGATATAGGAATGAAGTTCATTCGTGTGGTGAACGGTGAGACCTTGGTGGTAGTGGAGGAAGGAACGACAGAATATCGTCTTCTTTTGGAGGTGGATCAATCAGTGTGGCTACCACCTGACTTTAAAACATTTCGAAAATTATATACGACTAAGGTGCTACATCATCGAGCTAATCGCTCTTGGACACTTTTATCTTTTGTATCAACTGATCGCTCTGTCTAG

Protein sequence

MSSAVAIPEQDWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEVDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFVSTDRSV
Homology
BLAST of Tan0009907 vs. NCBI nr
Match: XP_038882290.1 (cysteine proteinase inhibitor 5-like [Benincasa hispida])

HSP 1 Score: 79.7 bits (195), Expect = 1.8e-11
Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI H+PYVQ +GRFAV+EH   L    +KFI VV+GET  + +    EYRL++EV
Sbjct: 24  WEPIKNI-HDPYVQEMGRFAVMEHTHKLVGASLKFICVVSGETRPMSQ--GKEYRLVVEV 83

Query: 72  -DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFVSTD 111
            +Q +  PP      K Y   VL    +RSW L+SFVS++
Sbjct: 84  AEQIITSPPMLSVSIKFYLATVLEKPIDRSWQLISFVSSN 120

BLAST of Tan0009907 vs. NCBI nr
Match: KGN53820.1 (hypothetical protein Csa_014847 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.0e-11
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 2   SSAVAIP--EQDWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVE 61
           S A  +P   +D K I N+++N Y+Q +G+FAV EH  +++ I  KFI  V    +  V 
Sbjct: 5   SVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFIS-VGFAVVCSVP 64

Query: 62  EGTTEYRLLLEVDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
            G  +Y LL++VD+ + L P F  + KLY   VLH++ N SW LL F
Sbjct: 65  VGGDKYHLLVKVDEFI-LAPSFPKYEKLYMATVLHNKVNHSWALLRF 109

BLAST of Tan0009907 vs. NCBI nr
Match: WP_198843152.1 (hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical protein [Aureibaculum sp. A20])

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-11
Identity = 46/98 (46.94%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI H+PYVQ +GRF+V+EH   L    MKFIRVV+GET  + E    EYRL++EV
Sbjct: 28  WEPIKNI-HDPYVQEMGRFSVMEHTHKLVGASMKFIRVVSGETRPMSE--GKEYRLVVEV 87

Query: 72  -DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFVS 109
            +  +  PP      K Y   VL    +RSW L +FVS
Sbjct: 88  AEHIITCPPMLSVSVKFYLATVLEKPLDRSWQLEAFVS 122

BLAST of Tan0009907 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-10
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 0

Query: 11  DWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLE 70
           DW+ + N+ H+PYVQ +GRFAV+EH+  L  +GM F+RVV+GE+ +V E    +Y L++E
Sbjct: 22  DWEPV-NV-HDPYVQELGRFAVMEHVHGLCGVGMTFVRVVSGESKMVCE--GKKYSLVVE 81

Query: 71  VDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
           V + + LP       KLY  +VL  +  +SW LL+F
Sbjct: 82  VKEVLVLPHQCPAI-KLYVAEVLDKQCAKSWELLAF 112

BLAST of Tan0009907 vs. NCBI nr
Match: WP_156424223.1 (hypothetical protein, partial [Myroides odoratus])

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-09
Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 0

Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI H+PYVQ +GRF+V+EH   L    MKFIRVV+GET  + E    EYRL++EV
Sbjct: 21  WEPIKNI-HDPYVQEMGRFSVMEHTHKLVGASMKFIRVVSGETRPMSE--GKEYRLVVEV 80

Query: 72  -DQSVWLPPDFKTFRKLYTTKVLHHRANRSW 102
            +  +  PP      K Y   VL    +RSW
Sbjct: 81  AEHIITCPPMLSVSVKFYLATVLEKPLDRSW 108

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A0A0KW14 (Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 0

Query: 2   SSAVAIP--EQDWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVE 61
           S A  +P   +D K I N+++N Y+Q +G+FAV EH  +++ I  KFI  V    +  V 
Sbjct: 5   SVATVVPNDREDCKQISNVEYNEYLQAMGKFAVEEHTHNMSGIERKFIS-VGFAVVCSVP 64

Query: 62  EGTTEYRLLLEVDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
            G  +Y LL++VD+ + L P F  + KLY   VLH++ N SW LL F
Sbjct: 65  VGGDKYHLLVKVDEFI-LAPSFPKYEKLYMATVLHNKVNHSWALLRF 109

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.2e-08
Identity = 40/96 (41.67%), Postives = 61/96 (63.54%), Query Frame = 0

Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W+ I+NI ++PYVQ +GRFAV+EH  +L     +FIRVV+GE+ VV   G  +Y L++EV
Sbjct: 25  WEPIKNI-NDPYVQELGRFAVMEHTHNLCGASYEFIRVVSGESQVV---GGKKYCLVIEV 84

Query: 72  DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFV 108
            +++ + P   +  K +   +L     +SW LLSFV
Sbjct: 85  KETI-IIPSMPSSIKFFKAIMLDKAWEKSWALLSFV 115

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.6e-08
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0

Query: 11  DWKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLE 70
           DW+ + N+ H+ YVQ +GRFAV+EH+  L  +GM FI VV+GE+ +V E    +Y L++E
Sbjct: 22  DWEPV-NV-HDQYVQELGRFAVMEHVHGLCGVGMTFICVVSGESKMVCE--GKKYSLVVE 81

Query: 71  VDQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSF 107
           V +   LP       KLY   VL  +  +SW LL+F
Sbjct: 82  VKEVPVLPHACPAI-KLYVADVLDKQCAKSWELLAF 112

BLAST of Tan0009907 vs. ExPASy TrEMBL
Match: A0A6J1DHK4 (cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111021157 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-04
Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 12  WKSIENIDHNPYVQTIGRFAVVEHISSLADIGMKFIRVVNGETLVVVEEGTTEYRLLLEV 71
           W  IEN++ N YVQ IGRFAV+EH     +  +KF++V  G + VV     T YRL+LE 
Sbjct: 28  WTPIENVEENSYVQEIGRFAVMEHNKQTGN-HLKFLKVTKGWSQVV---AGTNYRLILE- 87

Query: 72  DQSVWLPPDFKTFRKLYTTKVLHHRANRSWTLLSFV 108
             +V +      +  +   K   H    SWTL+SF+
Sbjct: 88  --AVNMAGMIWNYEAVVWDKPWEH----SWTLISFI 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038882290.11.8e-1146.00cysteine proteinase inhibitor 5-like [Benincasa hispida][more]
KGN53820.13.0e-1140.19hypothetical protein Csa_014847 [Cucumis sativus][more]
WP_198843152.13.9e-1146.94hypothetical protein, partial [Aureibaculum sp. A20] >MBJ2176574.1 hypothetical ... [more]
XP_023543511.11.5e-1043.75cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo][more]
WP_156424223.12.2e-0946.15hypothetical protein, partial [Myroides odoratus][more]
Match NameE-valueIdentityDescription
A0A0A0KW141.5e-1140.19Acetate kinase OS=Cucumis sativus OX=3659 GN=Csa_4G151760 PE=4 SV=1[more]
A0A6J1BU611.2e-0841.67cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1GCT22.6e-0842.71uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530... [more]
A0A6J1DHK41.0e-0438.54cysteine proteinase inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111021... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 7..108
e-value: 1.1E-11
score: 46.8
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 15..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0009907.1Tan0009907.1mRNA