Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCTTCACCACCAACTGGAAGAGGTAGTTGGTCAAAAAGAAAACTCATCTATGTCTCACCTTGATGAAGATAGATCACATTTTTCTAATGATGTCAATATTGAAAGATCTCCTATGACTGCCCACAATCAAAACTTTTCACTCAATCCTAAGTATAAGGCAGTTACACATAATCCAATCCCAATCCCTACATTAGACTCCCCTGCTACTCGAACAAGATCAACACTTCTTAGGCAAGTAGCAACCTCTAATGGAAGCAATCTTGAAAATGAAGATCATACCATCGGTGAACACCCAACTGACACAACAGTACTACCAAAACGAACAAGAGGTCTTACTAAGATGAAGATAATAGCTGTTGATAACCAATCTAGAGTGGACCTAATTTTTAATGAGATGGGAAACCCATTGGGGATTCATCTATAG
mRNA sequence
ATGTCGCTTCACCACCAACTGGAAGAGGTAGTTGGTCAAAAAGAAAACTCATCTATGTCTCACCTTGATGAAGATAGATCACATTTTTCTAATGATGTCAATATTGAAAGATCTCCTATGACTGCCCACAATCAAAACTTTTCACTCAATCCTAAGTATAAGGCAGTTACACATAATCCAATCCCAATCCCTACATTAGACTCCCCTGCTACTCGAACAAGATCAACACTTCTTAGGCAAGTAGCAACCTCTAATGGAAGCAATCTTGAAAATGAAGATCATACCATCGGTGAACACCCAACTGACACAACAGTACTACCAAAACGAACAAGAGGTCTTACTAAGATGAAGATAATAGCTGTTGATAACCAATCTAGAGTGGACCTAATTTTTAATGAGATGGGAAACCCATTGGGGATTCATCTATAG
Coding sequence (CDS)
ATGTCGCTTCACCACCAACTGGAAGAGGTAGTTGGTCAAAAAGAAAACTCATCTATGTCTCACCTTGATGAAGATAGATCACATTTTTCTAATGATGTCAATATTGAAAGATCTCCTATGACTGCCCACAATCAAAACTTTTCACTCAATCCTAAGTATAAGGCAGTTACACATAATCCAATCCCAATCCCTACATTAGACTCCCCTGCTACTCGAACAAGATCAACACTTCTTAGGCAAGTAGCAACCTCTAATGGAAGCAATCTTGAAAATGAAGATCATACCATCGGTGAACACCCAACTGACACAACAGTACTACCAAAACGAACAAGAGGTCTTACTAAGATGAAGATAATAGCTGTTGATAACCAATCTAGAGTGGACCTAATTTTTAATGAGATGGGAAACCCATTGGGGATTCATCTATAG
Protein sequence
MSLHHQLEEVVGQKENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRTRSTLLRQVATSNGSNLENEDHTIGEHPTDTTVLPKRTRGLTKMKIIAVDNQSRVDLIFNEMGNPLGIHL
Homology
BLAST of Tan0009800 vs. NCBI nr
Match:
TYK13531.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 92.8 bits (229), Expect = 2.5e-15
Identity = 60/141 (42.55%), Postives = 73/141 (51.77%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K S+ L D N+ N+E SP+ H S P YK V NPI LDS A RT
Sbjct: 341 KRRSTRRKLIADSFLLPNEENMESSPIDVHPNTLSPKPSYKIVEGNPI----LDSSAART 400
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + RQ TSN + E EDH + E P +T L K+TRG TKMK
Sbjct: 401 RLAIRRQTTTSNVNGFEEPPLETITLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 460
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
IAV+ QSRVD++FNE G P+G
Sbjct: 461 IAVEKQSRVDIVFNEYGQPIG 477
BLAST of Tan0009800 vs. NCBI nr
Match:
KAA0056210.1 (integrase [Cucumis melo var. makuwa])
HSP 1 Score: 92.4 bits (228), Expect = 3.3e-15
Identity = 60/141 (42.55%), Postives = 74/141 (52.48%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K+ S+ L D N+ N+E SP+ H S P K V NPI LDSPA RT
Sbjct: 301 KKRSTRRKLIGDSLLLPNEENMESSPIDVHPNTLSSKPSDKIVEGNPI----LDSPAART 360
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + RQ TSN + E EDH + E P +T L K+TRG TKMK
Sbjct: 361 RLAIRRQATTSNVNGFEEPQLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 420
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
IAV+ QSRVD++FNE G P+G
Sbjct: 421 IAVEKQSRVDIVFNEYGQPIG 437
BLAST of Tan0009800 vs. NCBI nr
Match:
KAA0058414.1 (putative TNP1-like transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 92.0 bits (227), Expect = 4.3e-15
Identity = 60/141 (42.55%), Postives = 73/141 (51.77%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K S+ L D N+ N+E SP+ H S P K V NPI LDSPA RT
Sbjct: 265 KRRSTRRKLIADSLLLPNEENMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPAART 324
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + RQ TSN + E EDH + E P +T L K+TRG TKMK
Sbjct: 325 RLAIRRQATTSNMNGFEEPPLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 384
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
IAV+ QSRVD++FNE G P+G
Sbjct: 385 IAVEKQSRVDIVFNEYGQPIG 401
BLAST of Tan0009800 vs. NCBI nr
Match:
KAA0041468.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 91.7 bits (226), Expect = 5.6e-15
Identity = 55/121 (45.45%), Postives = 68/121 (56.20%), Query Frame = 0
Query: 34 NIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRTRSTLLRQVATSNGSNLEN-- 93
++E SP+ H S P K V NPI LDSPATRTR + RQ TSN + E
Sbjct: 4 HMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPATRTRLAIRRQATTSNVNGFEEPP 63
Query: 94 ------------EDHTIGEHPT-DTTVLPKRTRGLTKMKIIAVDNQSRVDLIFNEMGNPL 140
EDH + E P +T +L K+TRGLTKMK IAV+ QSRVD++F E G P+
Sbjct: 64 LETTTLPNEKAVEDHVVDEEPPFETMILRKKTRGLTKMKTIAVEKQSRVDIVFKEYGQPI 120
BLAST of Tan0009800 vs. NCBI nr
Match:
KAA0036852.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 90.9 bits (224), Expect = 9.6e-15
Identity = 59/141 (41.84%), Postives = 74/141 (52.48%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K +S+ L D N+ N+E SP+ H S P K V NPI LDSPA RT
Sbjct: 295 KRSSTRRKLIVDSLRLPNEENMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPAART 354
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + Q TSN + E EDH I E P +T +L K+TRG TKMK
Sbjct: 355 RLAIRWQATTSNVNGFEEPPLETTTLPNEKAVEDHVIDEEPPFETMILQKKTRGPTKMKT 414
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
I+V+ QSRVD++FNE G P+G
Sbjct: 415 ISVEKQSRVDIVFNEYGQPIG 431
BLAST of Tan0009800 vs. ExPASy TrEMBL
Match:
A0A5D3CNY4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00040 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 60/141 (42.55%), Postives = 73/141 (51.77%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K S+ L D N+ N+E SP+ H S P YK V NPI LDS A RT
Sbjct: 341 KRRSTRRKLIADSFLLPNEENMESSPIDVHPNTLSPKPSYKIVEGNPI----LDSSAART 400
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + RQ TSN + E EDH + E P +T L K+TRG TKMK
Sbjct: 401 RLAIRRQTTTSNVNGFEEPPLETITLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 460
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
IAV+ QSRVD++FNE G P+G
Sbjct: 461 IAVEKQSRVDIVFNEYGQPIG 477
BLAST of Tan0009800 vs. ExPASy TrEMBL
Match:
A0A5A7UM47 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00020 PE=4 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 1.6e-15
Identity = 60/141 (42.55%), Postives = 74/141 (52.48%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K+ S+ L D N+ N+E SP+ H S P K V NPI LDSPA RT
Sbjct: 301 KKRSTRRKLIGDSLLLPNEENMESSPIDVHPNTLSSKPSDKIVEGNPI----LDSPAART 360
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + RQ TSN + E EDH + E P +T L K+TRG TKMK
Sbjct: 361 RLAIRRQATTSNVNGFEEPQLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 420
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
IAV+ QSRVD++FNE G P+G
Sbjct: 421 IAVEKQSRVDIVFNEYGQPIG 437
BLAST of Tan0009800 vs. ExPASy TrEMBL
Match:
A0A5A7UTC4 (Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G001270 PE=4 SV=1)
HSP 1 Score: 92.0 bits (227), Expect = 2.1e-15
Identity = 60/141 (42.55%), Postives = 73/141 (51.77%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K S+ L D N+ N+E SP+ H S P K V NPI LDSPA RT
Sbjct: 265 KRRSTRRKLIADSLLLPNEENMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPAART 324
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + RQ TSN + E EDH + E P +T L K+TRG TKMK
Sbjct: 325 RLAIRRQATTSNMNGFEEPPLETTTLPNEKAVEDHVVDEEPPFETMTLRKKTRGPTKMKT 384
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
IAV+ QSRVD++FNE G P+G
Sbjct: 385 IAVEKQSRVDIVFNEYGQPIG 401
BLAST of Tan0009800 vs. ExPASy TrEMBL
Match:
A0A5A7TEX1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G00480 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 2.7e-15
Identity = 55/121 (45.45%), Postives = 68/121 (56.20%), Query Frame = 0
Query: 34 NIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRTRSTLLRQVATSNGSNLEN-- 93
++E SP+ H S P K V NPI LDSPATRTR + RQ TSN + E
Sbjct: 4 HMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPATRTRLAIRRQATTSNVNGFEEPP 63
Query: 94 ------------EDHTIGEHPT-DTTVLPKRTRGLTKMKIIAVDNQSRVDLIFNEMGNPL 140
EDH + E P +T +L K+TRGLTKMK IAV+ QSRVD++F E G P+
Sbjct: 64 LETTTLPNEKAVEDHVVDEEPPFETMILRKKTRGLTKMKTIAVEKQSRVDIVFKEYGQPI 120
BLAST of Tan0009800 vs. ExPASy TrEMBL
Match:
A0A5A7T097 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001590 PE=4 SV=1)
HSP 1 Score: 90.9 bits (224), Expect = 4.6e-15
Identity = 59/141 (41.84%), Postives = 74/141 (52.48%), Query Frame = 0
Query: 14 KENSSMSHLDEDRSHFSNDVNIERSPMTAHNQNFSLNPKYKAVTHNPIPIPTLDSPATRT 73
K +S+ L D N+ N+E SP+ H S P K V NPI LDSPA RT
Sbjct: 295 KRSSTRRKLIVDSLRLPNEENMESSPIDVHPNTLSPKPSDKIVEGNPI----LDSPAART 354
Query: 74 RSTLLRQVATSNGSNLEN--------------EDHTIGEHPT-DTTVLPKRTRGLTKMKI 133
R + Q TSN + E EDH I E P +T +L K+TRG TKMK
Sbjct: 355 RLAIRWQATTSNVNGFEEPPLETTTLPNEKAVEDHVIDEEPPFETMILQKKTRGPTKMKT 414
Query: 134 IAVDNQSRVDLIFNEMGNPLG 140
I+V+ QSRVD++FNE G P+G
Sbjct: 415 ISVEKQSRVDIVFNEYGQPIG 431
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
TYK13531.1 | 2.5e-15 | 42.55 | putative TNP1-like transposon protein [Cucumis melo var. makuwa] | [more] |
KAA0056210.1 | 3.3e-15 | 42.55 | integrase [Cucumis melo var. makuwa] | [more] |
KAA0058414.1 | 4.3e-15 | 42.55 | putative TNP1-like transposon protein [Cucumis melo var. makuwa] | [more] |
KAA0041468.1 | 5.6e-15 | 45.45 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0036852.1 | 9.6e-15 | 41.84 | Plant transposase [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CNY4 | 1.2e-15 | 42.55 | Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5A7UM47 | 1.6e-15 | 42.55 | Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold85G00020 PE=4 ... | [more] |
A0A5A7UTC4 | 2.1e-15 | 42.55 | Putative TNP1-like transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5A7TEX1 | 2.7e-15 | 45.45 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6G0048... | [more] |
A0A5A7T097 | 4.6e-15 | 41.84 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G001... | [more] |
Match Name | E-value | Identity | Description | |