Tan0009776 (gene) Snake gourd v1

Overview


Name	Tan0009776
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Mitochondrial 28S Ribosomal protein
Location	LG05: 3044724 .. 3047299 (-)
RNA-Seq Expression	Tan0009776
Synteny	Tan0009776

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATTACAATTTCCCAGCCACTTGCCGAAGCCCCGTGGAGCAGTGAAATAGCGATACCAGAGAGAAGGGCAACCAAACCTAGAGAGAGAGACGCCAATGTCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGATTATCTTCTAGCTTTATCAGAAGCTTCAGTACGTCTTCGCCGTCAACGTCTTCTTCGAACCCCAATGCCTCGACTGCTTCGAGTAAAACCAAGCGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAATTCAGTTTTTGCCCAATTGGGGTGTAGGATACCATGTCGCCAAGGCTCACTGGGATGAAATATCGTATCAGATCACCAAAATCAACCTATACAAGGTCTGTCTCTATCTGGTTTTGTTTCTTAGATTTGGATTGTGGTTCATTTGAGATCATTCTCCAATATAATCTTCAGAAAATTTCGCAATAAATGATATACAGTTTCTGCACATGGTTACCATTTCTTGTGTGCATTCGAGTAACTAGACGGATTGAGTGGTTTTAAAGGTTTTGATTCGGGTAAAAACTCAGTGGTTTTAAAGATTTATAGAATTTGAGACATTGGAGGCGTTTGACATTTTCTCTAAAACTATTGATTATCAAGCAGGAAGTTTAACAATCTGTTTACTTTCGGGGATTCTAGGATTCGGGGTTTAAGCTTTTCTTTCGATTTCTCTTTACAGAGTGGTACGCATGGCAAGGCATGGGGCATCGCTCATAAAGATGGTTAGTGATTCTATATCACAAAATCTAGTTCCTTAATCGTTGTTGGAGTTTCATTCTAGTTTTTATCATGCTGCTGGAATTTTGTTCGAATATTTATTTAGAAGAATGAGAATCCATACATACTTGAATCTCTTATACGTCCTGTTTACCTAGGGAAAACTCTACAATTTAGGACCATGACATCAAGAGTTCATGCTTTAGAGTTGATTTAAGATGCGTGATTGGGAAAGATGAAAGTTAGAAAGTTATCATTCACTATTTACCAATTTTCATGCCTGGTATATAGGATTATATTTCATGACAATTTAGTTACTTCTATTATAAATACTAAACAGTCTGCAAGCATTGAAGTTTTTTGAGGCATGAGGTCCTGAAAGGCTTAAGCTGGAGCTAGATTTAGCAGCAAGTTTGCCCTTTAGGCCTTTAAATTGATCCCTTTTGAAGTCTCTAATGAGGCAACTTCAGACTTTGTAATCGATATAGCTAACCGTTATTTTGCTTACAAATGAAAGTTAAAATTTGAGTTTCTATAGACCTATATTTCTGTATGTTATTGTTGCTTTTTGCAATCTACTGTCATCAATGACAGATTGAATGATGTTACAAAAATTTGTTCCAGGCACGCCCATTGCAGAAGCTCCAAAGAAAATAAGCGGAGTTCACAAGCGTTGTTGGAAGTATATCGCAAGCTTGCCAAAATCATCGGAGAGTGAATCAATCACAATGACGAATTTGGGAGAAAGCAACCCATCAGCTGAAGTTCAAACTTCATGACTGCAGATAAATTTAAGCTGCTGATTCTTTTTGGCCAACCTTATTTCCTGATTCACAGAGTTCTAGTCTCTCCAGATTAGCAGCCCTTAAACATAGTCAGGTTTCTTAACTCCATTATATGAGGGGCATTCTGTGTTTTACTTGTTTCCGAGATAAAAGAAAGATCAATCATCCCGAACTAAGTGTAAGTTGAACTTGTTTTCTATTATCAGTTACTAGTGGGTTTTTATGTTAAATAGAGGTTGAAGAATCTAGTTGGTATTTTTGAATCTGTGTTTTTGTCCTGCTGTGAGATGAATATAATGTTTCCTTTTTAGTTAATTTGGGGGGAAAACAAAAAAAGGGCTATTTTTTCTTTAAAAAAAAAACTCCTTTGAATTTTACCCTTTGTTTAAAAAATACTCCAATTCTCTTCAGGGTGACAATATTGCCCTTGACTTTTCATGAACATTTCGAAACTACCTTTGGAGTAGAAATTTGTTAGAATATTGGATGGAAAGTCAACGTGGTAGTGACTTAAAACAATGTATCATTGACTGAGACGTTTGTATAGATTAAGTCTCAAAGAATAGCATTTTGCCATGTCAACTTTTTGCCCAATATTATAATGGATTTCTCCTCCAAGGGGAATTTTTATGAAAGGTCAAGGGTAATATTACAACTCTAGAGCAAAGTTTGAGAGTATTTTTTTATAATTTAACCCAAAGAAATCAATTTTTTAATTTCAAAATTATTTTTAAGAATTATGATCAGTGATAAGATTAGTATTGTTGTGTTCATTGAAAAGTATGGTTGTGTTGATTGAAATTATTGTTAAAAACTGTAATTTTGTACGAAAAACTTCATTTGTTCAACGAAAAAGACCATTCATGATAACCATCCACTAACTTTTATTCTTACATTTTTGCGAAGAAACTGTAATAGTCTGGTTTTGTTTAATTTTGTCTTATTAGTTGGTTTTGAAGATGAATTGAGGCAGCTTACATGGATTCAGGATTCAAGTGGTTCAGATTGTAAGGATGTTTGTTGGTTAAAATAAATTG

mRNA sequence

CAAAAATTACAATTTCCCAGCCACTTGCCGAAGCCCCGTGGAGCAGTGAAATAGCGATACCAGAGAGAAGGGCAACCAAACCTAGAGAGAGAGACGCCAATGTCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGATTATCTTCTAGCTTTATCAGAAGCTTCAGTACGTCTTCGCCGTCAACGTCTTCTTCGAACCCCAATGCCTCGACTGCTTCGAGTAAAACCAAGCGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAATTCAGTTTTTGCCCAATTGGGGTGTAGGATACCATGTCGCCAAGGCTCACTGGGATGAAATATCGTATCAGATCACCAAAATCAACCTATACAAGAGTGGTACGCATGGCAAGGCATGGGGCATCGCTCATAAAGATGGCACGCCCATTGCAGAAGCTCCAAAGAAAATAAGCGGAGTTCACAAGCGTTGTTGGAAGTATATCGCAAGCTTGCCAAAATCATCGGAGAGTGAATCAATCACAATGACGAATTTGGGAGAAAGCAACCCATCAGCTGAAGTTCAAACTTCATGACTGCAGATAAATTTAAGCTGCTGATTCTTTTTGGCCAACCTTATTTCCTGATTCACAGAGTTCTAGTCTCTCCAGATTAGCAGCCCTTAAACATAGTCAGGTTTCTTAACTCCATTATATGAGGGGCATTCTGTGTTTTACTTGTTTCCGAGATAAAAGAAAGATCAATCATCCCGAACTAAGTTTGGTTTTGAAGATGAATTGAGGCAGCTTACATGGATTCAGGATTCAAGTGGTTCAGATTGTAAGGATGTTTGTTGGTTAAAATAAATTG

Coding sequence (CDS)

ATGTCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGATTATCTTCTAGCTTTATCAGAAGCTTCAGTACGTCTTCGCCGTCAACGTCTTCTTCGAACCCCAATGCCTCGACTGCTTCGAGTAAAACCAAGCGGAGGAAGAAGAAGAAGAACCTGTTCGAAGTAATTCAGTTTTTGCCCAATTGGGGTGTAGGATACCATGTCGCCAAGGCTCACTGGGATGAAATATCGTATCAGATCACCAAAATCAACCTATACAAGAGTGGTACGCATGGCAAGGCATGGGGCATCGCTCATAAAGATGGCACGCCCATTGCAGAAGCTCCAAAGAAAATAAGCGGAGTTCACAAGCGTTGTTGGAAGTATATCGCAAGCTTGCCAAAATCATCGGAGAGTGAATCAATCACAATGACGAATTTGGGAGAAAGCAACCCATCAGCTGAAGTTCAAACTTCATGA

Protein sequence

MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVHKRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS

Homology

[Close]

BLAST of Tan0009776 vs. NCBI nr
Match: XP_023532313.1 (uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267.3 bits (682), Expect = 8.2e-68
Identity = 135/156 (86.54%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVI
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYI SLP+SSE+E  TMTNLGESNPSAE QTS
Sbjct: 121 KRCWKYIPSLPRSSENEPTTMTNLGESNPSAEAQTS 156

[Close]

BLAST of Tan0009776 vs. NCBI nr
Match: XP_023007567.1 (uncharacterized protein LOC111500023 [Cucurbita maxima])

HSP 1 Score: 267.3 bits (682), Expect = 8.2e-68
Identity = 136/156 (87.18%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVI
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYI SL +SSE+E  TMTNLGESNPSAEVQTS
Sbjct: 121 KRCWKYIPSLSRSSENEPTTMTNLGESNPSAEVQTS 156

[Close]

BLAST of Tan0009776 vs. NCBI nr
Match: XP_022947647.1 (uncharacterized protein LOC111451448 [Cucurbita moschata])

HSP 1 Score: 265.0 bits (676), Expect = 4.1e-67
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVI
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYI SLP+S E+E  TMTNLGESNPSAEVQ+S
Sbjct: 121 KRCWKYIPSLPRSLENEPTTMTNLGESNPSAEVQSS 156

[Close]

BLAST of Tan0009776 vs. NCBI nr
Match: XP_038900676.1 (uncharacterized protein LOC120087826 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 9.1e-67
Identity = 136/154 (88.31%), Postives = 142/154 (92.21%), Query Frame = 0


Query: 3   VANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVIQF 62
           VANRTAISRALDFSRLSS+FIR+FSTSSPSTSSSNPNASTAS+K KRRKKKKNLFEV+QF
Sbjct: 4   VANRTAISRALDFSRLSSTFIRTFSTSSPSTSSSNPNASTASTKNKRRKKKKNLFEVVQF 63

Query: 63  LPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 122
           LPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHKDGTPIAEAPKKISGVHKR
Sbjct: 64  LPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKDGTPIAEAPKKISGVHKR 123

Query: 123 CWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           CWKYIASLP+S           GESNPSAEVQTS
Sbjct: 124 CWKYIASLPRS-----------GESNPSAEVQTS 146

[Close]

BLAST of Tan0009776 vs. NCBI nr
Match: KAG6605433.1 (hypothetical protein SDJN03_02750, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035381.1 hypothetical protein SDJN02_02177 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 132/156 (84.62%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRT ISRALDFSRL+SSFIR+FSTS+ S SSS+P+AS A+SK KRRKKKKNLFEVI
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSASSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYI SL +S E+E  TMTNLGESNPSAEVQ+S
Sbjct: 121 KRCWKYIPSLSRSLENEPTTMTNLGESNPSAEVQSS 156

[Close]

BLAST of Tan0009776 vs. ExPASy TrEMBL
Match: A0A6J1KZ28 (uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.0e-68
Identity = 136/156 (87.18%), Postives = 147/156 (94.23%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVI
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAKAHWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYI SL +SSE+E  TMTNLGESNPSAEVQTS
Sbjct: 121 KRCWKYIPSLSRSSENEPTTMTNLGESNPSAEVQTS 156

[Close]

BLAST of Tan0009776 vs. ExPASy TrEMBL
Match: A0A6J1G714 (uncharacterized protein LOC111451448 OS=Cucurbita moschata OX=3662 GN=LOC111451448 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 134/156 (85.90%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRT ISRALDFSRL+SSFIR+FSTS+ STSSS+P+AS A+SK KRRKKKKNLFEVI
Sbjct: 1   MAVANRTTISRALDFSRLASSFIRNFSTSTLSTSSSDPSASAAASKNKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWGIAHK+G PIAEAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKGHWDEISYQITKINLYKNGTHGKAWGIAHKNGAPIAEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYI SLP+S E+E  TMTNLGESNPSAEVQ+S
Sbjct: 121 KRCWKYIPSLPRSLENEPTTMTNLGESNPSAEVQSS 156

[Close]

BLAST of Tan0009776 vs. ExPASy TrEMBL
Match: A0A0A0KH76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 131/156 (83.97%), Postives = 139/156 (89.10%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRTAISRALDFSRLSSSF+R+FS+SSPSTSSSNPNAS  SS+TKRRKKKKNLFEV+
Sbjct: 1   MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVV 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+GTPI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYIASLP S           GES  SAEVQTS
Sbjct: 121 KRCWKYIASLPHS-----------GESKTSAEVQTS 145

[Close]

BLAST of Tan0009776 vs. ExPASy TrEMBL
Match: A0A5A7V0Y6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00360 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 131/156 (83.97%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNAS +SS+TKRRKKKKNLFEVI
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYIASLP+           LGES  SAEVQTS
Sbjct: 121 KRCWKYIASLPR-----------LGESKTSAEVQTS 145

[Close]

BLAST of Tan0009776 vs. ExPASy TrEMBL
Match: A0A1S3CKN2 (uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 131/156 (83.97%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 1   MSVANRTAISRALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFEVI 60
           M+VANRTAISRALDFSRLSSSFIR+F++SSPSTSSSNPNAS +SS+TKRRKKKKNLFEVI
Sbjct: 1   MAVANRTAISRALDFSRLSSSFIRTFTSSSPSTSSSNPNASPSSSQTKRRKKKKNLFEVI 60

Query: 61  QFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISGVH 120
           QFLPNWGVGYHVAK+HWDEISYQITKINLYKSGTHGKAWGIAHK+G PI EAPKKISGVH
Sbjct: 61  QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGMPIVEAPKKISGVH 120

Query: 121 KRCWKYIASLPKSSESESITMTNLGESNPSAEVQTS 157
           KRCWKYIASLP+           LGES  SAEVQTS
Sbjct: 121 KRCWKYIASLPR-----------LGESKTSAEVQTS 145

[Close]

BLAST of Tan0009776 vs. TAIR 10
Match: AT5G52370.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 3.8e-39
Identity = 87/136 (63.97%), Postives = 102/136 (75.00%), Query Frame = 0


Query: 1   MSVANRTAISR--ALDFSRLSSSFIRSFSTSSPSTSSSNPNASTASSKTKRRKKKKNLFE 60
           M++ NR AISR   +   RLS + +R+FS +  S      N S+ SSK KRR KKKNL E
Sbjct: 3   MTLINR-AISRTETVGAFRLSLNLLRNFSAAPAS-----ENPSSDSSKPKRR-KKKNLIE 62

Query: 61  VIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKISG 120
           V QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKAWGI HKDG   AEAPKKISG
Sbjct: 63  VAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKISG 122

Query: 121 VHKRCWKYIASLPKSS 135
           VHKRCWKYI +L K++
Sbjct: 123 VHKRCWKYIPNLSKTA 131

[Close]

BLAST of Tan0009776 vs. TAIR 10
Match: AT5G58990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 157.5 bits (397), Expect = 8.6e-39
Identity = 86/137 (62.77%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 1   MSVANRTAISR--ALDFSRLSSSFIRSFSTS-SPSTSSSNPNASTASSKTKRRKKKKNLF 60
           M++ NR AISR   +    LS S +R+FS + S +++ ++ N S+ S+K KRR KKKNL 
Sbjct: 3   MTLMNR-AISRTETVGAFSLSLSLLRNFSAAPSAASTPASENPSSDSNKPKRR-KKKNLI 62

Query: 61  EVIQFLPNWGVGYHVAKAHWDEISYQITKINLYKSGTHGKAWGIAHKDGTPIAEAPKKIS 120
           EV QFLPNWG+GYH+AKAHW+ ISY+ITKINLYK G HGKAWGI HKDG   AEAPKKIS
Sbjct: 63  EVAQFLPNWGIGYHMAKAHWNGISYEITKINLYKDGRHGKAWGIVHKDGLRAAEAPKKIS 122

Query: 121 GVHKRCWKYIASLPKSS 135
           GVHKRCWKYI +L K++
Sbjct: 123 GVHKRCWKYIPNLSKTT 137

The following BLAST results are available for this feature:

BLAST of Tan0009776 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0009776 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532313.1	8.2e-68	86.54	uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo]	[more]
XP_023007567.1	8.2e-68	87.18	uncharacterized protein LOC111500023 [Cucurbita maxima]	[more]
XP_022947647.1	4.1e-67	85.90	uncharacterized protein LOC111451448 [Cucurbita moschata]	[more]
XP_038900676.1	9.1e-67	88.31	uncharacterized protein LOC120087826 [Benincasa hispida]	[more]
KAG6605433.1	1.3e-65	84.62	hypothetical protein SDJN03_02750, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Tan0009776 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KZ28	4.0e-68	87.18	uncharacterized protein LOC111500023 OS=Cucurbita maxima OX=3661 GN=LOC111500023...	[more]
A0A6J1G714	2.0e-67	85.90	uncharacterized protein LOC111451448 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]
A0A0A0KH76	1.0e-63	83.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188090 PE=4 SV=1	[more]
A0A5A7V0Y6	1.7e-63	83.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKN2	1.7e-63	83.97	uncharacterized protein LOC103502049 OS=Cucumis melo OX=3656 GN=LOC103502049 PE=...	[more]

BLAST of Tan0009776 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52370.1	3.8e-39	63.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G58990.1	8.6e-39	62.77	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032053	Mitochondrial 28S ribosomal protein S34	PFAM	PF16053	MRP-S34	coord: 54..137 e-value: 1.7E-11 score: 44.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..44
None	No IPR available	PANTHER	PTHR35316	28S RIBOSOMAL S34 PROTEIN	coord: 4..153
None	No IPR available	PANTHER	PTHR35316:SF1	28S RIBOSOMAL S34 PROTEIN	coord: 4..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009776.1	Tan0009776.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome