Tan0009652 (gene) Snake gourd v1

Overview


Name	Tan0009652
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ulp1-like peptidase
Location	LG09: 26646121 .. 26646780 (-)
RNA-Seq Expression	Tan0009652
Synteny	Tan0009652

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACTAGCATGCTGGATATTATCGATGACTGGGAGACGTTTTGTTGCGAGGACTGGAGTACCCTAATATTTAATAAGACGATTAAAAGCTTGAAAAAAGGTTTGAAGGGCAAAGCAGAGTCGTACAAGGAGAAACAAAATACTATGAAAAAGTCAGAGACGTATAGCTTATATGGATTTCTGTACGCGTTTCAGGTTAGTTGAAACAAAATATTGAATTTGATATTTACTCGATAACACCATTTAACTTTTTTAATACTTTGCTAATGCAGGTATGGGCATATGAGATTGTCTCGACGTTGAGAGGGTGTGTTGTTAGTCGATTAAATGACACGTCCATTTCAAGAATCTGTAGATGGTCATGCACACACTCTCCTTCGTATTTACGACTCACCAGCGAGATATTTGCATCCAATATGGTTAGTAGTATCAATGTTTAATTTACTTCAATATATTCGACATTCGGTTTACTTATGTATTGTTTTTTAGGCCACTATCCATCCCGATCTCGTCGCTTTTGAGGACGAGGTTCGTTTCATCAATAGAAGGATTCAACCCCCACGTGTACCAGCAGCAACACCTGTTCCTTTGCCACCACCAGCACCTGTTCCTTTGCCACCATTGTCTGATCCTCCTTCTTCTTCTGCCTCTGCTTGA

mRNA sequence

ATGGACACTAGCATGCTGGATATTATCGATGACTGGGAGACGTTTTGTTGCGAGGACTGGAGTACCCTAATATTTAATAAGACGATTAAAAGCTTGAAAAAAGGTTTGAAGGGCAAAGCAGAGTCGTACAAGGAGAAACAAAATACTATGAAAAAGTCAGAGACGTATAGCTTATATGGATTTCTGTACGCGTTTCAGATTGTCTCGACGTTGAGAGGGTGTGTTGTTAGTCGATTAAATGACACGTCCATTTCAAGAATCTGTAGATGGTCATGCACACACTCTCCTTCGTATTTACGACTCACCAGCGAGATATTTGCATCCAATATGGCCACTATCCATCCCGATCTCGTCGCTTTTGAGGACGAGGTTCGTTTCATCAATAGAAGGATTCAACCCCCACGTGTACCAGCAGCAACACCTGTTCCTTTGCCACCACCAGCACCTGTTCCTTTGCCACCATTGTCTGATCCTCCTTCTTCTTCTGCCTCTGCTTGA

Coding sequence (CDS)

ATGGACACTAGCATGCTGGATATTATCGATGACTGGGAGACGTTTTGTTGCGAGGACTGGAGTACCCTAATATTTAATAAGACGATTAAAAGCTTGAAAAAAGGTTTGAAGGGCAAAGCAGAGTCGTACAAGGAGAAACAAAATACTATGAAAAAGTCAGAGACGTATAGCTTATATGGATTTCTGTACGCGTTTCAGATTGTCTCGACGTTGAGAGGGTGTGTTGTTAGTCGATTAAATGACACGTCCATTTCAAGAATCTGTAGATGGTCATGCACACACTCTCCTTCGTATTTACGACTCACCAGCGAGATATTTGCATCCAATATGGCCACTATCCATCCCGATCTCGTCGCTTTTGAGGACGAGGTTCGTTTCATCAATAGAAGGATTCAACCCCCACGTGTACCAGCAGCAACACCTGTTCCTTTGCCACCACCAGCACCTGTTCCTTTGCCACCATTGTCTGATCCTCCTTCTTCTTCTGCCTCTGCTTGA

Protein sequence

MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNTMKKSETYSLYGFLYAFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVAFEDEVRFINRRIQPPRVPAATPVPLPPPAPVPLPPLSDPPSSSASA

Homology

[Close]

BLAST of Tan0009652 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-20
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 1   MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEK-QNTMKKSETYSLY 60
           MDTS+L I+D WE FC  D S++IF +T+ SLK  LK K E+YK+K        ETYSLY
Sbjct: 10  MDTSLLGIVDRWEVFCDYDRSSMIFERTLWSLKNALKDKVEAYKQKVAIDSSHVETYSLY 69

Query: 61  GFLYAFQI-----VSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIH 120
           GF YAFQ+     +STL   V  RLND +I R+ RWSCT+S ++  L  E+F +  + + 
Sbjct: 70  GFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVV 129

Query: 121 PDLVAFEDEVRFINRRIQPPRVPAATPVP 144
             L A + E + + R + PP  P   P P
Sbjct: 130 VRLEATDVERQHMARVMHPPVAPVGPPAP 158

[Close]

BLAST of Tan0009652 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18
Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 1   MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNTMKKS--ETYSL 60
           MDTS+L I+D WE FC  DWS++IF +T+ SLK  LK K E YK+K   M  S  ETYSL
Sbjct: 169 MDTSLLGIVDRWEVFCNYDWSSMIFERTLWSLKNALKDKVEXYKQKV-AMDSSHVETYSL 228

Query: 61  YGFLYAFQI-----VSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIF 107
           Y F YAFQ+     +STL   V  RLND +I R+ RWSCT+S ++  L  E+F
Sbjct: 229 YXFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 280

[Close]

BLAST of Tan0009652 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 99.4 bits (246), Expect = 3.1e-17
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 1   MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNT-MKKSETYSLY 60
           +DT++L ++D WE FC  DWS++IF++TI SLK  LK K   Y++K        ETYSLY
Sbjct: 169 IDTALLGVVDRWEVFCNYDWSSMIFDRTIWSLKNALKDKLSVYQQKATADPSHVETYSLY 228

Query: 61  GFLYAFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVA 120
           GF YAFQ+ +      +S L+D +I R+ RWSC +S  +  LTSE+F +  + +   L+A
Sbjct: 229 GFPYAFQVWAYE---TISTLSDDAIPRLLRWSCIYSCGFRVLTSEVFDNTRSKVKEHLLA 288

Query: 121 FEDEVRFINRRIQPPRVPA-ATPVPLPPPAPVPLPPLS-------DPPS 161
            + + + + R I PP V     P  +P  A VP PP S       DPP+
Sbjct: 289 TDAKEQHMVRVILPPEVRVIPDPPAVPDRAVVPDPPASPERAAVPDPPA 334

[Close]

BLAST of Tan0009652 vs. NCBI nr
Match: KAA0035169.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 4.7e-13
Identity = 45/132 (34.09%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 2   DTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYK-EKQNTMKKSETYSLYG 61
           D  +L  +DD E F   DWST  + + + SLK  L+GK E+Y+ +K  + K    Y++ G
Sbjct: 167 DMDILGRVDDEEAFKSFDWSTFFYTRLLNSLKTSLQGKKEAYELKKTRSFKAVSYYNIKG 226

Query: 62  FLYAFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVAF 121
           +++A++++ST    + +R N   I RI RW+CT +PSY  L   IF +    + P L   
Sbjct: 227 YVWAYEVLSTANEHLATRNNKGLIPRILRWNCTQAPSYKMLQKNIFDNKNTVVQPKLKMS 286

Query: 122 EDEVRFINRRIQ 133
             E  F+  +I+
Sbjct: 287 TQEKAFMESQIR 298

[Close]

BLAST of Tan0009652 vs. NCBI nr
Match: KAA0048125.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK23047.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-12
Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 0


Query: 5   MLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNTMKKSET-YSLYGFLY 64
           +L  +DD   F   DWST  + + + SLK  L+GK E+Y+ K+ T  K+   Y++ G+++
Sbjct: 105 ILGRVDDEGAFKSFDWSTFFYTRLLNSLKTSLQGKKEAYELKKTTSSKAVAYYNIKGYVW 164

Query: 65  AFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVAFEDE 124
            ++++ST    + +R N   I RI RW+CT +PSY  L   IF +    + P L     E
Sbjct: 165 GYEVLSTASEHLTTRNNKGVIPRILRWNCTQAPSYKMLQKNIFDNKNTVVKPKLKLSTQE 224

Query: 125 VRFINRRIQ 133
             F+  RI+
Sbjct: 225 KAFMESRIR 233

[Close]

BLAST of Tan0009652 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 8.6e-21
Identity = 66/149 (44.30%), Postives = 89/149 (59.73%), Query Frame = 0


Query: 1   MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEK-QNTMKKSETYSLY 60
           MDTS+L I+D WE FC  D S++IF +T+ SLK  LK K E+YK+K        ETYSLY
Sbjct: 10  MDTSLLGIVDRWEVFCDYDRSSMIFERTLWSLKNALKDKVEAYKQKVAIDSSHVETYSLY 69

Query: 61  GFLYAFQI-----VSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIH 120
           GF YAFQ+     +STL   V  RLND +I R+ RWSCT+S ++  L  E+F +  + + 
Sbjct: 70  GFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVV 129

Query: 121 PDLVAFEDEVRFINRRIQPPRVPAATPVP 144
             L A + E + + R + PP  P   P P
Sbjct: 130 VRLEATDVERQHMARVMHPPVAPVGPPAP 158

[Close]

BLAST of Tan0009652 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.2e-19
Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 1   MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNTMKKS--ETYSL 60
           MDTS+L I+D WE FC  DWS++IF +T+ SLK  LK K E YK+K   M  S  ETYSL
Sbjct: 169 MDTSLLGIVDRWEVFCNYDWSSMIFERTLWSLKNALKDKVEXYKQKV-AMDSSHVETYSL 228

Query: 61  YGFLYAFQI-----VSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIF 107
           Y F YAFQ+     +STL   V  RLND +I R+ RWSCT+S ++  L  E+F
Sbjct: 229 YXFPYAFQVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 280

[Close]

BLAST of Tan0009652 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 0


Query: 1   MDTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNT-MKKSETYSLY 60
           +DT++L ++D WE FC  DWS++IF++TI SLK  LK K   Y++K        ETYSLY
Sbjct: 169 IDTALLGVVDRWEVFCNYDWSSMIFDRTIWSLKNALKDKLSVYQQKATADPSHVETYSLY 228

Query: 61  GFLYAFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVA 120
           GF YAFQ+ +      +S L+D +I R+ RWSC +S  +  LTSE+F +  + +   L+A
Sbjct: 229 GFPYAFQVWAYE---TISTLSDDAIPRLLRWSCIYSCGFRVLTSEVFDNTRSKVKEHLLA 288

Query: 121 FEDEVRFINRRIQPPRVPA-ATPVPLPPPAPVPLPPLS-------DPPS 161
            + + + + R I PP V     P  +P  A VP PP S       DPP+
Sbjct: 289 TDAKEQHMVRVILPPEVRVIPDPPAVPDRAVVPDPPASPERAAVPDPPA 334

[Close]

BLAST of Tan0009652 vs. ExPASy TrEMBL
Match: A0A5A7T1E1 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002690 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-13
Identity = 45/132 (34.09%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 2   DTSMLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYK-EKQNTMKKSETYSLYG 61
           D  +L  +DD E F   DWST  + + + SLK  L+GK E+Y+ +K  + K    Y++ G
Sbjct: 167 DMDILGRVDDEEAFKSFDWSTFFYTRLLNSLKTSLQGKKEAYELKKTRSFKAVSYYNIKG 226

Query: 62  FLYAFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVAF 121
           +++A++++ST    + +R N   I RI RW+CT +PSY  L   IF +    + P L   
Sbjct: 227 YVWAYEVLSTANEHLATRNNKGLIPRILRWNCTQAPSYKMLQKNIFDNKNTVVQPKLKMS 286

Query: 122 EDEVRFINRRIQ 133
             E  F+  +I+
Sbjct: 287 TQEKAFMESQIR 298

[Close]

BLAST of Tan0009652 vs. ExPASy TrEMBL
Match: A0A5A7U388 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G00110 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12
Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 0


Query: 5   MLDIIDDWETFCCEDWSTLIFNKTIKSLKKGLKGKAESYKEKQNTMKKSET-YSLYGFLY 64
           +L  +DD   F   DWST  + + + SLK  L+GK E+Y+ K+ T  K+   Y++ G+++
Sbjct: 105 ILGRVDDEGAFKSFDWSTFFYTRLLNSLKTSLQGKKEAYELKKTTSSKAVAYYNIKGYVW 164

Query: 65  AFQIVSTLRGCVVSRLNDTSISRICRWSCTHSPSYLRLTSEIFASNMATIHPDLVAFEDE 124
            ++++ST    + +R N   I RI RW+CT +PSY  L   IF +    + P L     E
Sbjct: 165 GYEVLSTASEHLTTRNNKGVIPRILRWNCTQAPSYKMLQKNIFDNKNTVVKPKLKLSTQE 224

Query: 125 VRFINRRIQ 133
             F+  RI+
Sbjct: 225 KAFMESRIR 233

The following BLAST results are available for this feature:

BLAST of Tan0009652 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0009652 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154965.1	1.8e-20	44.30	uncharacterized protein LOC111022110 [Momordica charantia]	[more]
XP_022157020.1	1.3e-18	52.21	uncharacterized protein LOC111023847 [Momordica charantia]	[more]
XP_022153201.1	3.1e-17	40.24	uncharacterized protein LOC111020757 [Momordica charantia]	[more]
KAA0035169.1	4.7e-13	34.09	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0048125.1	4.0e-12	34.11	Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK23047.1 Ulp1-like peptidase [...	[more]

BLAST of Tan0009652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DL40	8.6e-21	44.30	uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DRZ7	6.2e-19	52.21	uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DJX9	1.5e-17	40.24	uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7T1E1	2.3e-13	34.09	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0...	[more]
A0A5A7U388	1.9e-12	34.11	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G...	[more]

BLAST of Tan0009652 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009652.1	Tan0009652.1	mRNA