Tan0009638 (gene) Snake gourd v1

Overview


Name	Tan0009638
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Signaling peptide TAXIMIN 1
Location	LG02: 1387108 .. 1387473 (+)
RNA-Seq Expression	Tan0009638
Synteny	Tan0009638

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTGTGGAGATGGCGATTGTAGGCCACTGGGCTTCTTGCTCGGCTTGCCTTTTGCTTTCCTTTCTCTTCTCCTTTCCATCGTCGGCGTAGTTATCTGGATTGTGGGGTAAATTTCTCAAACCCCCTTTAATTTTTAGCTTCTGGGTGTTCTTGATTTGGTTCGTTTCTTCTGAATCTGTTGGCTCTTTTCATGTTTCTGTTGATTCGTGACTCTGTTTTCTCTGGGTTTTCGCCGCAGATTGACGCTTACTTGCATATGTCCTTGTTGTTTGTGCTTGACGGTGATAGTGGAGCTTGCGTTGGAATTGATCAAAGCCCCAATTCATGTCATGCAGTGGTTCACTTCTCAGATTCCTTGTTGA

mRNA sequence

ATGTGCTGTGGAGATGGCGATTGTAGGCCACTGGGCTTCTTGCTCGGCTTGCCTTTTGCTTTCCTTTCTCTTCTCCTTTCCATCGTCGGCGTAGTTATCTGGATTGTGGGATTGACGCTTACTTGCATATGTCCTTGTTGTTTGTGCTTGACGGTGATAGTGGAGCTTGCGTTGGAATTGATCAAAGCCCCAATTCATGTCATGCAGTGGTTCACTTCTCAGATTCCTTGTTGA

Coding sequence (CDS)

ATGTGCTGTGGAGATGGCGATTGTAGGCCACTGGGCTTCTTGCTCGGCTTGCCTTTTGCTTTCCTTTCTCTTCTCCTTTCCATCGTCGGCGTAGTTATCTGGATTGTGGGATTGACGCTTACTTGCATATGTCCTTGTTGTTTGTGCTTGACGGTGATAGTGGAGCTTGCGTTGGAATTGATCAAAGCCCCAATTCATGTCATGCAGTGGTTCACTTCTCAGATTCCTTGTTGA

Protein sequence

MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALELIKAPIHVMQWFTSQIPC

Homology

[Close]

BLAST of Tan0009638 vs. ExPASy Swiss-Prot
Match: O82275 (Signaling peptide TAXIMIN 1 OS=Arabidopsis thaliana OX=3702 GN=TAX1 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 6.0e-30
Identity = 63/77 (81.82%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MC  DGDCRPLGFLLGLPFAFLSLLLSI+GV+IWIVGL L+CICPCCLC+TV+VE+A+ L
Sbjct: 1  MC--DGDCRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVM+WF S+IPC
Sbjct: 61 IKAPIHVMEWFMSKIPC 75

[Close]

BLAST of Tan0009638 vs. ExPASy Swiss-Prot
Match: Q1G309 (Signaling peptide TAXIMIN 2 OS=Arabidopsis thaliana OX=3702 GN=TAX2 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.6e-21
Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 6  GDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALELIKAPI 65
          GDCRPLGFL+GLPFA ++L+L++VG VIWI+G  L+C+CPCC C   +   A++LIK PI
Sbjct: 2  GDCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLPI 61

Query: 66 HVMQWFTSQIPC 78
           V++WFT  IPC
Sbjct: 62 KVLRWFTHSIPC 73

[Close]

BLAST of Tan0009638 vs. NCBI nr
Match: XP_038888035.1 (signaling peptide TAXIMIN 1 [Benincasa hispida] >XP_038888036.1 signaling peptide TAXIMIN 1 [Benincasa hispida])

HSP 1 Score: 155.2 bits (391), Expect = 2.2e-34
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAFLSLLLSI+GV+IWIVGLTLTCICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVM+WFTSQIPC
Sbjct: 61 IKAPIHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. NCBI nr
Match: XP_022930666.1 (uncharacterized protein LOC111437071 [Cucurbita moschata] >XP_022930667.1 uncharacterized protein LOC111437071 [Cucurbita moschata] >XP_023530442.1 uncharacterized protein LOC111793011 [Cucurbita pepo subsp. pepo] >XP_023530443.1 uncharacterized protein LOC111793011 [Cucurbita pepo subsp. pepo] >KAG7022960.1 hypothetical protein SDJN02_16696 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 72/77 (93.51%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAF+SL+LS+VGV+IWIVGLTL+CICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFVSLILSLVGVIIWIVGLTLSCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVMQWFTSQIPC
Sbjct: 61 IKAPIHVMQWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. NCBI nr
Match: XP_008449391.1 (PREDICTED: uncharacterized protein LOC103491288 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 1.5e-33
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAF+SLLLSI+GV+IWIVGLTLTCICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFVSLLLSIIGVIIWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAP HVM+WFTSQIPC
Sbjct: 61 IKAPFHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. NCBI nr
Match: XP_004140113.1 (signaling peptide TAXIMIN 1 [Cucumis sativus] >KGN47949.1 hypothetical protein Csa_003666 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33
Identity = 71/77 (92.21%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAF+SL+LSI+GV+IWIVGLTLTCICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFVSLILSIIGVIIWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAP HVM+WFTSQIPC
Sbjct: 61 IKAPFHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. NCBI nr
Match: XP_024987348.1 (uncharacterized protein LOC112522459 [Cynara cardunculus var. scolymus])

HSP 1 Score: 151.8 bits (382), Expect = 2.5e-33
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVV+WIVGL LTCICPCCLCLTVIVE+A+EL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVVWIVGLLLTCICPCCLCLTVIVEIAIEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVM+WFTSQIPC
Sbjct: 61 IKAPIHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. ExPASy TrEMBL
Match: A0A6J1ER78 (uncharacterized protein LOC111437071 OS=Cucurbita moschata OX=3662 GN=LOC111437071 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.1e-34
Identity = 72/77 (93.51%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAF+SL+LS+VGV+IWIVGLTL+CICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFVSLILSLVGVIIWIVGLTLSCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVMQWFTSQIPC
Sbjct: 61 IKAPIHVMQWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. ExPASy TrEMBL
Match: A0A1S3BLY0 (uncharacterized protein LOC103491288 OS=Cucumis melo OX=3656 GN=LOC103491288 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.1e-34
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAF+SLLLSI+GV+IWIVGLTLTCICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFVSLLLSIIGVIIWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAP HVM+WFTSQIPC
Sbjct: 61 IKAPFHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. ExPASy TrEMBL
Match: A0A0A0KGH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419460 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 71/77 (92.21%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAF+SL+LSI+GV+IWIVGLTLTCICPCCLCLTVIVELALEL
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFVSLILSIIGVIIWIVGLTLTCICPCCLCLTVIVELALEL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAP HVM+WFTSQIPC
Sbjct: 61 IKAPFHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. ExPASy TrEMBL
Match: A0A6J1GJJ0 (uncharacterized protein LOC111454865 OS=Cucurbita moschata OX=3662 GN=LOC111454865 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAFLSL+LSI+GV+IWIVGLTLTCICPCCLCLTVIVELAL L
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFLSLILSIIGVIIWIVGLTLTCICPCCLCLTVIVELALGL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVM+WFTSQIPC
Sbjct: 61 IKAPIHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. ExPASy TrEMBL
Match: A0A6J1I283 (uncharacterized protein LOC111468358 OS=Cucurbita maxima OX=3661 GN=LOC111468358 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MCCGDGDCRPLGFLLGLPFAFLSL+LSIVGV+IWIVGLTLTCICPCCLCLTVIVE+AL L
Sbjct: 1  MCCGDGDCRPLGFLLGLPFAFLSLILSIVGVIIWIVGLTLTCICPCCLCLTVIVEIALGL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVM+WFTSQIPC
Sbjct: 61 IKAPIHVMEWFTSQIPC 77

[Close]

BLAST of Tan0009638 vs. TAIR 10
Match: AT2G31090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20562.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 4.2e-31
Identity = 63/77 (81.82%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MCCGDGDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALEL 60
          MC  DGDCRPLGFLLGLPFAFLSLLLSI+GV+IWIVGL L+CICPCCLC+TV+VE+A+ L
Sbjct: 1  MC--DGDCRPLGFLLGLPFAFLSLLLSIIGVIIWIVGLLLSCICPCCLCVTVLVEIAIGL 60

Query: 61 IKAPIHVMQWFTSQIPC 78
          IKAPIHVM+WF S+IPC
Sbjct: 61 IKAPIHVMEWFMSKIPC 75

[Close]

BLAST of Tan0009638 vs. TAIR 10
Match: AT2G20562.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31090.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.9 bits (250), Expect = 4.7e-22
Identity = 43/72 (59.72%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 6  GDCRPLGFLLGLPFAFLSLLLSIVGVVIWIVGLTLTCICPCCLCLTVIVELALELIKAPI 65
          GDCRPLGFL+GLPFA ++L+L++VG VIWI+G  L+C+CPCC C   +   A++LIK PI
Sbjct: 2  GDCRPLGFLIGLPFALVALVLALVGAVIWIIGTVLSCLCPCCFCFAALANFAVDLIKLPI 61

Query: 66 HVMQWFTSQIPC 78
           V++WFT  IPC
Sbjct: 62 KVLRWFTHSIPC 73

The following BLAST results are available for this feature:

BLAST of Tan0009638 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82275	6.0e-30	81.82	Signaling peptide TAXIMIN 1 OS=Arabidopsis thaliana OX=3702 GN=TAX1 PE=2 SV=2	[more]
Q1G309	6.6e-21	59.72	Signaling peptide TAXIMIN 2 OS=Arabidopsis thaliana OX=3702 GN=TAX2 PE=2 SV=1	[more]

BLAST of Tan0009638 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888035.1	2.2e-34	96.10	signaling peptide TAXIMIN 1 [Benincasa hispida] >XP_038888036.1 signaling peptid...	[more]
XP_022930666.1	1.5e-33	93.51	uncharacterized protein LOC111437071 [Cucurbita moschata] >XP_022930667.1 unchar...	[more]
XP_008449391.1	1.5e-33	93.51	PREDICTED: uncharacterized protein LOC103491288 [Cucumis melo]	[more]
XP_004140113.1	2.5e-33	92.21	signaling peptide TAXIMIN 1 [Cucumis sativus] >KGN47949.1 hypothetical protein C...	[more]
XP_024987348.1	2.5e-33	93.51	uncharacterized protein LOC112522459 [Cynara cardunculus var. scolymus]	[more]

BLAST of Tan0009638 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER78	7.1e-34	93.51	uncharacterized protein LOC111437071 OS=Cucurbita moschata OX=3662 GN=LOC1114370...	[more]
A0A1S3BLY0	7.1e-34	93.51	uncharacterized protein LOC103491288 OS=Cucumis melo OX=3656 GN=LOC103491288 PE=...	[more]
A0A0A0KGH9	1.2e-33	92.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419460 PE=4 SV=1	[more]
A0A6J1GJJ0	1.2e-33	93.51	uncharacterized protein LOC111454865 OS=Cucurbita moschata OX=3662 GN=LOC1114548...	[more]
A0A6J1I283	1.6e-33	93.51	uncharacterized protein LOC111468358 OS=Cucurbita maxima OX=3661 GN=LOC111468358...	[more]

BLAST of Tan0009638 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31090.1	4.2e-31	81.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G20562.1	4.7e-22	59.72	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33834:SF2	SIGNALING PEPTIDE TAXIMIN 1	coord: 1..77
None	No IPR available	PANTHER	PTHR33834	SIGNALING PEPTIDE TAXIMIN 2	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009638.1	Tan0009638.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane