Tan0009593 (gene) Snake gourd v1

Overview


Name	Tan0009593
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG02: 77326978 .. 77329604 (-)
RNA-Seq Expression	Tan0009593
Synteny	Tan0009593

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGCGGCGGACGGTGTGAGTAGTAACCGTAAGAACCCGCCTTGGGAGGAAACAACGGGTCGTGAACTCCTTACGACGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGTCGTGAACTTCTTTTCCGAGAAGAAACAATGACGGTATTTGGGGAATAAGCATCGACTAACTCGTGCCGCGTGCGCGTGTATACTGAGAGAATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCAGTAGGTGGCTTTTTAAGTCCGCCACAAATCCCAAGGCTCAACCACAGACAAAGTGGAAACTACCAAGATGGAGTACGGTGAGGGGCGGAGGAAATTTCCGGTGGAGCGGTGAAATGCGTAAGGATCGGAAAAAACACCAACGGCGAAAGCACTCTCTGCTGGGCGACACGAACTCGAGACGAAAGCTAGGGGAGTGAATGGGATTAGATACCCTAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGTTGTGAGTATCAACCCGCGGCGGTGTTGTAGCTAACGCGTTAAGTATCCCGCTTTGGGAATACGTTCGCAAGAATGAAACTCAAAGGAATTGACGGTCCGCATGGCGGTGGAGCATGTGGTTTAATTCGATGCAAAGCGAAGAACCTTACCGTGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGCCCTTCGAACGCGGACACGTGTGGTGCATGGTCGCTGTCGTCGGCTCGTGTCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCAACCGCTGAGGTTGGAACCCTCGAGCAGCATCGGTGGTGATAAGCGGGAGGAAGGTGAGGATGACGTCAAGTCATCATGTCCCTTATGCCCTGGGTGACACACGTGCTACAATGGCGGGACAAAGGGTCGTGATCCCGCGAGGTGAGCTAACTCCAAAACCCCGCCCTCGCCTCGGATTGTAGGTCGCAACTCGCCCTGCATGAAGCCGAATCGCTAGTAATCACCGGGCCACCATACGGCGGTGAATTCGTTCCCGCCCTTGTACACACCGCCCGTCACACTATGGAGTTGGCCATGCCCAAAGTCGTTACCTTAATCGCAATGAGGGGATGCCGGGCGCGTGGCTAGTGACCGGAGTGAAGTCGTAACAAGGTATCCGTCTTTGGAAGGTGCGGCTGGATCACCTCCTTTTCAGGGAGAGCTAATGCTTGTTGGGTATTTTGGTTTGACACTGCTTCACACCCAAAAAGAAGCGAGCTACGTCTGAGTTAAACTTGGAGATGGAAGTCTTCTTTCGTTTCTCGACGGTGAAGTAAGACTAAGCTCATGAGCTTATTATCCTAGGTCGGAACAAGTTGATAGGATCCCCTTTTTTACGTCCCCATGTCCCTCCCGTGTGGCGACATGGGGGCGAAAAAAGGAAAGAGAGGGATGGGGTTTCTCTCGCTTTTGGCATAGCGGGCCCCCAGCGGGAGGCCCGCACGACGGGCTATTAGCTCAGTGGTAGAGCGCGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGTTCAATGTGCTCATCAGCGCCTGACCCTGAGATGTGGATCATCCAAGGCACATTAGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTGCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCGGATATGGGCGCCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATGTTTGACTGATAAATAACTCACTTCTTGGTCGTCGACCCCCTCAGTCACTACGAACACCCCCGATCAGTGCAATGGGATGTGTCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCTTAACGCCTTCTTTTTTCTTCTCATCGGAGTTATTTCACAAAGACTTGCCATGGTAAGGAAGAAGGGGGGAACAAGCACACTTGGAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGAGTTCTATTGATTCTCTCCCAATTAGAGAGTTGTATTCTCTCCCAATTGGTCGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGTTACGCCAAGGAAACGTTGGAATATGATTACATACATCACACTAGATAG

mRNA sequence

ATGATCGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGCGGCGGACGGTGAAACAACGGGTCGTGAACTCCTTACGACGAGCAATGCCGCGTGGAGCATCGACTAACTCGTGCCGCGTGCGCGTGTATACTGAGAGAATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCAGTAGGTGGCTTTTTAAGTCCGCCACAAATCCCAAGGCTCAACCACAGACAAAGTGGAAACTACCAAGATGGAGTACGGTGAGGGGCGGAGGAAATTTCCGGGGAGTGAATGGGATTAGATACCCTAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGTTGTGAGTATCAACCCGCGGCGAACCTTACCGTGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGCCCTTCGAACGCGGACACGTGTGGTGCATGGTCGCTGTCGTCGGCTCGTGTCGTAAGGTCATCGGTGGTGATAAGCGGGAGGAAGGTGAGGATGACGTCAAGTCATCATGTCCCTTATGCCCTGGGTGACACACGTGCTACAATGGCGGGACAAAGGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTGCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCGGATATGGGCGCCTATCTCTCGAGCACAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATTTGTATTCTCTCCCAATTGGTCGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGTTACGCCAAGGAAACGTTGGAATATGATTACATACATCACACTAGATAG

Coding sequence (CDS)

ATGATCGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAGTGGTGTTTCCAGCGGCGGACGGTGAAACAACGGGTCGTGAACTCCTTACGACGAGCAATGCCGCGTGGAGCATCGACTAACTCGTGCCGCGTGCGCGTGTATACTGAGAGAATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCCAGTAGGTGGCTTTTTAAGTCCGCCACAAATCCCAAGGCTCAACCACAGACAAAGTGGAAACTACCAAGATGGAGTACGGTGAGGGGCGGAGGAAATTTCCGGGGAGTGAATGGGATTAGATACCCTAGTAGTCCTAGCCGTAAACGATGGATACTAGGTGTTGTGAGTATCAACCCGCGGCGAACCTTACCGTGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGCCCTTCGAACGCGGACACGTGTGGTGCATGGTCGCTGTCGTCGGCTCGTGTCGTAAGGTCATCGGTGGTGATAAGCGGGAGGAAGGTGAGGATGACGTCAAGTCATCATGTCCCTTATGCCCTGGGTGACACACGTGCTACAATGGCGGGACAAAGGCATGGCGTACTTCTCCTGTTCGAACCGGGGTTTGAAACCAAACTTCTGCTCAGGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCGGATATGGGCGCCTATCTCTCGAGCACAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTGGATCTAGCCGTAAGAAGAATTTGTATTCTCTCCCAATTGGTCGGACCGTAGGTGCGATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGTTACGCCAAGGAAACGTTGGAATATGATTACATACATCACACTAGATAG

Protein sequence

MIAGGMLNTCKSDGKWCFQRRTVKQRVVNSLRRAMPRGASTNSCRVRVYTERMQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVRGGGNFRGVNGIRYPSSPSRKRWILGVVSINPRRTLPWLDMPRILLKERGPSNADTCGAWSLSSARVVRSSVVISGRKVRMTSSHHVPYALGDTRATMAGQRHGVLLLFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYRIWAPISRAQKAAINRIFLILPSRKRKEEREILFPFFRRDQEIGSSRKKNLYSLPIGRTVGAMIYFTGEVSGSSPGWPSYAKETLEYDYIHHTR

Homology

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BLAST of Tan0009593 vs. ExPASy Swiss-Prot
Match: Q49KT9 (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.6e-20
Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0


Query: 204 GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYR 256
           GFETK LLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD  GSSLLENPYIPY+
Sbjct: 44  GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQ 95

[Close]

BLAST of Tan0009593 vs. ExPASy Swiss-Prot
Match: Q85WV9 (Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.0e-17
Identity = 44/59 (74.58%), Postives = 47/59 (79.66%), Query Frame = 0


Query: 200 LFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYR 256
           LFEPGF T+L+LRRIDGAIQVRSN DPTFYS V  G  GG    H GSSLLENPYIPY+
Sbjct: 7   LFEPGFGTELILRRIDGAIQVRSNADPTFYSFVDLGGPGGPVVIHHGSSLLENPYIPYQ 65

[Close]

BLAST of Tan0009593 vs. ExPASy Swiss-Prot
Match: P52807 (Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-15
Identity = 43/59 (72.88%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 200 LFEPGFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGD---HLGSSLLENPYIPYR 256
           L EPGF T+L+LRRIDGAIQVRSN DPTFYS V  G  G     HLGSSLLENPYIPY+
Sbjct: 7   LCEPGFGTELILRRIDGAIQVRSNTDPTFYSFVDLGGPGVPVVIHLGSSLLENPYIPYQ 65

[Close]

BLAST of Tan0009593 vs. ExPASy Swiss-Prot
Match: Q6ENB7 (Uncharacterized protein ycf68 OS=Oryza nivara OX=4536 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.2e-10
Identity = 36/57 (63.16%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 208 KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYRIWAPISRAQ 265
           KLLLRRIDGAIQVRS+VD TFYSLVGSGRSGG                +W  ISRAQ
Sbjct: 15  KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQ 71

[Close]

BLAST of Tan0009593 vs. ExPASy Swiss-Prot
Match: P0C304 (Uncharacterized protein ycf68 OS=Oryza sativa OX=4530 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.2e-10
Identity = 36/57 (63.16%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 208 KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYRIWAPISRAQ 265
           KLLLRRIDGAIQVRS+VD TFYSLVGSGRSGG                +W  ISRAQ
Sbjct: 15  KLLLRRIDGAIQVRSHVDLTFYSLVGSGRSGGGTTAPLFSRIHTSLISVWRAISRAQ 71

[Close]

BLAST of Tan0009593 vs. NCBI nr
Match: KAF1876869.1 (hypothetical protein Lal_00033161 [Lupinus albus])

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-42
Identity = 123/234 (52.56%), Postives = 137/234 (58.55%), Query Frame = 0


Query: 53  MQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVRGGGNFR----GVNGIRYPS 112
           MQALSGMIGRKAS      S +NP+AQP T           GGGN++    G NGIRYPS
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWT-----------GGGNYQAGVGGANGIRYPS 60

Query: 113 SPSRKRWILGVV------------SINPRRTLPWLDMPRILLKERGP-SNADTCGAWSLS 172
           SPSRKRWILGVV            SI P  TLP LDMPRILLKERG   NADT GAW LS
Sbjct: 61  SPSRKRWILGVVRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAW-LS 120

Query: 173 SARVVRSSVVISGR-----KVRMTSSHHVPYALGD--TRATMAG-----QRHGVLLLFEP 232
           SAR         G         +    H  Y   D  +R+  AG      R  +  + E 
Sbjct: 121 SARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREAGPGGRPARRAISSVVER 180

Query: 233 GFETKLLL--RRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYR 256
             +  +++   RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLEN YIPY+
Sbjct: 181 APDNCVVVPGLRIDGAIQVRSNVDPTFYSLVGSGRSGGDHDGSSLLENSYIPYQ 222

[Close]

BLAST of Tan0009593 vs. NCBI nr
Match: OIV94276.1 (hypothetical protein TanjilG_00025 [Lupinus angustifolius])

HSP 1 Score: 152.5 bits (384), Expect = 6.6e-33
Identity = 119/266 (44.74%), Postives = 133/266 (50.00%), Query Frame = 0


Query: 34  AMPRGASTNSCRVRVYTERMQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVR 93
           AMPRGA  NS    V T+RMQALSGMIGRKAS      S +NP+AQP T           
Sbjct: 116 AMPRGA--NSVPAAVVTQRMQALSGMIGRKASIGGFLSSPSNPRAQPWT----------- 175

Query: 94  GGGNFRGVNGIRYPSSPSRKRWILGVVSINPRRTLPWLDMPRILLKERGP-SNADTCGAW 153
           GGGN++   G                       TLP LDMPRILLKERG   NADT GAW
Sbjct: 176 GGGNYQAGVG-----------------------TLPGLDMPRILLKERGAFGNADTGGAW 235

Query: 154 SLSSARV------------VRSSVVI------------------SGRKVRMTSSHHV--- 213
            LSSAR             V+SS  +                   G     T  HH    
Sbjct: 236 -LSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREGELTPKTRPHHTAVN 295

Query: 214 --PYALGDTRATM-AGQRHGVLLLFEPGFE-------TKLLLRRIDGAIQVRSNVDPTFY 256
             P  +   R TM AG      L  + G         ++++ RRIDGAIQVRSNVDPTFY
Sbjct: 296 SFPGLVHTARHTMGAGHARSRYLNRKEGDAEGRASDWSEVVTRRIDGAIQVRSNVDPTFY 344

[Close]

BLAST of Tan0009593 vs. NCBI nr
Match: YP_009939916.1 (hypothetical protein RF68 [Citrus medica] >YP_009939929.1 hypothetical protein RF68 [Citrus medica] >QNV49244.1 hypothetical protein RF68 [Citrus medica] >QNV49257.1 hypothetical protein RF68 [Citrus medica])

HSP 1 Score: 141.4 bits (355), Expect = 1.5e-29
Identity = 88/158 (55.70%), Postives = 94/158 (59.49%), Query Frame = 0


Query: 204 GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYRIW------ 263
           GFE KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLL+NPYIPY+        
Sbjct: 10  GFENKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPYQCMDSYLSS 69

Query: 264 --------------------------APIS----------------------RAQKAAIN 307
                                     +P+S                        +KAAIN
Sbjct: 70  TGLGSASMGKKMEHLTTYLHRPRTTRSPLSFHSGVTEGSYHSSLFFFHAFPGGLEKAAIN 129

[Close]

BLAST of Tan0009593 vs. NCBI nr
Match: QJI81180.1 (hypothetical protein RF68 [Citrus aurantium] >QJI81193.1 hypothetical protein RF68 [Citrus aurantium])

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-29
Identity = 88/159 (55.35%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 204 GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYRIW------ 263
           GFE KLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLL+NPYIPY+        
Sbjct: 10  GFENKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHHGSSLLDNPYIPYQCMDSYLSS 69

Query: 264 --------------------------APIS-----------------------RAQKAAI 307
                                     +P+S                         +KAAI
Sbjct: 70  TGLGSASMGKKMEHLTTYLHRPRTTRSPLSFHSGVTEGSYHSSLFFFFHAFPGGLEKAAI 129

[Close]

BLAST of Tan0009593 vs. NCBI nr
Match: QUO98456.1 (hypothetical chloroplast RF68 [Canarium album] >QUO98473.1 hypothetical chloroplast RF68 [Canarium album])

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-29
Identity = 88/157 (56.05%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 204 GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYRIW------ 263
           GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGG H GSSLL+NPYIPY+        
Sbjct: 10  GFETKLLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGGHHGSSLLDNPYIPYQCMDSYLSS 69

Query: 264 --------------------------APIS---------------------RAQKAAINR 307
                                     +P+S                       +KAAINR
Sbjct: 70  TGLGSASMGKKMEHLTTYLHRPRTTRSPLSFHSGVTEGSYHSSLFFHAFPGGLEKAAINR 129

[Close]

BLAST of Tan0009593 vs. ExPASy TrEMBL
Match: A0A2N9HP93 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.7e-61
Identity = 193/440 (43.86%), Postives = 217/440 (49.32%), Query Frame = 0


Query: 1   MIAGGMLNTCKSDGKWCFQRRTV--------------KQRVVNSLRR---AMPRGASTNS 60
           M AGGMLNTCKSDGKWCFQ RT               +  +  + R+   AMPRGA+   
Sbjct: 43  MNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAV-- 102

Query: 61  CRVRVYTERMQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVRGGGNF----R 120
                  +RMQALSGMIGRKAS        +NP+AQP T           GGGN+    R
Sbjct: 103 ------IQRMQALSGMIGRKASVGGFLSPPSNPRAQPWT-----------GGGNYQAGVR 162

Query: 121 GVNGIRYPSSPSRKRWILGVV------------SINPRRTLPWLDMPRILLKERGP-SNA 180
           G NGIRYPSSPSRKRWILG V            SI P  TLP LDMPRILLKERG   NA
Sbjct: 163 GANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRILLKERGAFGNA 222

Query: 181 DTCGAWSLSSARV------------VRSSVVI--------SGRKVRMTSSHHVPYALGDT 240
           DT GAW LSSAR             V+SS  +        +GR    T+ +  P  +   
Sbjct: 223 DTGGAW-LSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGHTAVNSFPGLVHTA 282

Query: 241 RATMAG------------------------------------------------------ 300
           R TM                                                        
Sbjct: 283 RHTMGAGHARSRYLNHKEGDAEGRASDWSEVVTRSEQVDRIPFFSPPCRHTGGTWERKKG 342

Query: 301 -QRHGVLLLF---EPGFE------TKLLLR-----------RIDGAIQVRSNVDPTFYSL 307
            +R GV L F    PG        + ++ R           RIDGAIQVRSNVDPTFYS+
Sbjct: 343 KERDGVSLAFGIAGPGGRPARRAISSVVERAPDNCVVVPGLRIDGAIQVRSNVDPTFYSI 402

[Close]

BLAST of Tan0009593 vs. ExPASy TrEMBL
Match: A0A2N9GIA5 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 4.0e-60
Identity = 169/323 (52.32%), Postives = 190/323 (58.82%), Query Frame = 0


Query: 34  AMPRGASTNSCRVRVYTERMQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVR 93
           AMPRGA+          +RMQALSGMIGRKAS        +NP+AQP T           
Sbjct: 411 AMPRGAAV--------IQRMQALSGMIGRKASVGGFLSPPSNPRAQPWT----------- 470

Query: 94  GGGNF----RGVNGIRYPSSPSRKRWILGVV------------SINPRRTLPWLDMPRIL 153
           GGGN+    RG NGIRYPSSPSRKRWILG V            SI P  TLP LDMPRIL
Sbjct: 471 GGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRIL 530

Query: 154 LKERGP-SNADTCGAWSLSSARV------------VRSSVVI--------SGRKVRMTSS 213
           LKERG   NADT GAW LSSAR             V+SS  +        +GR    T+ 
Sbjct: 531 LKERGAFGNADTGGAW-LSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGHTAV 590

Query: 214 HHVPYALGDTRATM-AGQRHGVLLLFEPGFE-------TKLLLRRIDGAIQVRSNVDPTF 273
           +  P  +   R TM AG      L  + G         ++++ RRIDGAIQVRSNVDPTF
Sbjct: 591 NSFPGLVHTARHTMGAGHARSRYLNHKEGDAEGRASDWSEVVTRRIDGAIQVRSNVDPTF 650

Query: 274 YSLVGSGRSGGDHLGSSLLENPYIPYRIWAPISRA-----QKAAINRIFLILPSRKRKEE 307
           YS+VGSGRSGGDH GSSLLENPYIPY+       +     +KAAINRIFLILP   RKEE
Sbjct: 651 YSIVGSGRSGGDHHGSSLLENPYIPYQYMDSYLSSTGLGLEKAAINRIFLILPF--RKEE 710

[Close]

BLAST of Tan0009593 vs. ExPASy TrEMBL
Match: A0A2N9HJI4 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39743 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 3.4e-51
Identity = 156/344 (45.35%), Postives = 173/344 (50.29%), Query Frame = 0


Query: 1   MIAGGMLNTCKSDGKWCFQRRTV--------------KQRVVNSLRR---AMPRGASTNS 60
           M AGGMLNTCKSDGKWCFQ RT               +  +  + R+   AMPRGA+   
Sbjct: 121 MNAGGMLNTCKSDGKWCFQWRTATLGLRHGPDSYGRQQWGIFRNGRKPDGAMPRGAAV-- 180

Query: 61  CRVRVYTERMQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVRGGGNF----- 120
                  +RMQALSGMIGRKAS        +NP+AQP T           GGGN+     
Sbjct: 181 ------IQRMQALSGMIGRKASVGGFLSPPSNPRAQPWT-----------GGGNYQAGQA 240

Query: 121 ---------RGVNGIRYPSSPSRKRWILGVV------------SINPRRTLPWLDMPRIL 180
                    RG NGIRYPSSPSRKRWILG V            SI P  TLP LDMPRIL
Sbjct: 241 VETTKLEFPRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRIL 300

Query: 181 LKERGP-SNADTCGAWSLSSARVVR-------------------------------SSVV 240
           LKERG   NADT GAW LSSAR                                   S+V
Sbjct: 301 LKERGAFGNADTGGAW-LSSARATAGDKPEEGEDDVKSSCPLCPGRHTLQLACMKPESLV 360

Query: 241 ISGRKVRMTSSHHVPY--ALGDTRATM-AGQRHGVLLLFEPG-----------FETKLLL 256
           I+G+         VP+   +   R TM AG      L  + G             T    
Sbjct: 361 IAGQPY---GGEFVPFPGLVHTARHTMGAGHARSRYLNHKEGDAEGRASDWSEVVTSSRT 420

[Close]

BLAST of Tan0009593 vs. ExPASy TrEMBL
Match: A0A6A5MVI7 (Uncharacterized protein ycf68 OS=Lupinus albus OX=3870 GN=Lal_00033161 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-42
Identity = 123/234 (52.56%), Postives = 137/234 (58.55%), Query Frame = 0


Query: 53  MQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVRGGGNFR----GVNGIRYPS 112
           MQALSGMIGRKAS      S +NP+AQP T           GGGN++    G NGIRYPS
Sbjct: 1   MQALSGMIGRKASVGGFLSSPSNPRAQPWT-----------GGGNYQAGVGGANGIRYPS 60

Query: 113 SPSRKRWILGVV------------SINPRRTLPWLDMPRILLKERGP-SNADTCGAWSLS 172
           SPSRKRWILGVV            SI P  TLP LDMPRILLKERG   NADT GAW LS
Sbjct: 61  SPSRKRWILGVVRIDPCNAVANALSIPPGETLPGLDMPRILLKERGAFGNADTGGAW-LS 120

Query: 173 SARVVRSSVVISGR-----KVRMTSSHHVPYALGD--TRATMAG-----QRHGVLLLFEP 232
           SAR         G         +    H  Y   D  +R+  AG      R  +  + E 
Sbjct: 121 SARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSREAGPGGRPARRAISSVVER 180

Query: 233 GFETKLLL--RRIDGAIQVRSNVDPTFYSLVGSGRSGGDHLGSSLLENPYIPYR 256
             +  +++   RIDGAIQVRSNVDPTFYSLVGSGRSGGDH GSSLLEN YIPY+
Sbjct: 181 APDNCVVVPGLRIDGAIQVRSNVDPTFYSLVGSGRSGGDHDGSSLLENSYIPYQ 222

[Close]

BLAST of Tan0009593 vs. ExPASy TrEMBL
Match: A0A2N9G477 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22061 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-35
Identity = 132/320 (41.25%), Postives = 151/320 (47.19%), Query Frame = 0


Query: 34   AMPRGASTNSCRVRVYTERMQALSGMIGRKASSRWLFKSATNPKAQPQTKWKLPRWSTVR 93
            AMPRGA+          +RMQALSGMIGRKAS        +NP+AQP T           
Sbjct: 3175 AMPRGAAV--------IQRMQALSGMIGRKASVGGFLSPPSNPRAQPWT----------- 3234

Query: 94   GGGNF----RGVNGIRYPSSPSRKRWILGVV------------SINPRRTLPWLDMPRIL 153
            GGGN+    RG NGIRYPSSPSRKRWILG V            SI P  TLP LDMPRIL
Sbjct: 3235 GGGNYQAGVRGANGIRYPSSPSRKRWILGAVRIDPCSAVANALSIPPGETLPGLDMPRIL 3294

Query: 154  LKERGP-SNADTCGAWSLSSARVVRSSVVISGRKVRMTSSHHVPYALGDTRATMAGQRHG 213
            LKERG   NADT GAW LSSAR         G     +S    P           G R  
Sbjct: 3295 LKERGAFGNADTGGAW-LSSARATAGDKPEEGEDDVKSSCPLCPGRHTCYNGRDKGSRSR 3354

Query: 214  VLLLFEPGFETKL----------------------------LLRRIDGAIQVRSNVDPTF 273
                  P F+ +L                            LL  +DG ++ +   + T 
Sbjct: 3355 EGAAGSPPFQGELTLVGYFGLTLLHTQKEASYVWVKLGDGSLLSFLDGEVRPQWEENKTE 3414

Query: 274  YSLVGSGRSGGDHLGSSLL-ENPYIPYRIWA-PISRAQKAAINRIFLILPSRKRKEEREI 307
            +      R        S   +   +P+  W      A+KAAINRIFLILP   RKEE EI
Sbjct: 3415 HRTTYLHRPRTTRAPLSFWGDGGIVPFEPWGHAFPEAEKAAINRIFLILPF--RKEEVEI 3471

The following BLAST results are available for this feature:

BLAST of Tan0009593 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q49KT9	6.6e-20	92.31	Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus OX=71271 GN...	[more]
Q85WV9	9.0e-17	74.58	Uncharacterized protein ycf68 OS=Pinus koraiensis OX=88728 GN=ycf68 PE=3 SV=1	[more]
P52807	1.3e-15	72.88	Uncharacterized protein ycf68 OS=Pinus thunbergii OX=3350 GN=ycf68 PE=3 SV=1	[more]
Q6ENB7	6.2e-10	63.16	Uncharacterized protein ycf68 OS=Oryza nivara OX=4536 GN=ycf68-1 PE=3 SV=1	[more]
P0C304	6.2e-10	63.16	Uncharacterized protein ycf68 OS=Oryza sativa OX=4530 GN=ycf68-1 PE=3 SV=1	[more]

BLAST of Tan0009593 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1876869.1	3.5e-42	52.56	hypothetical protein Lal_00033161 [Lupinus albus]	[more]
OIV94276.1	6.6e-33	44.74	hypothetical protein TanjilG_00025 [Lupinus angustifolius]	[more]
YP_009939916.1	1.5e-29	55.70	hypothetical protein RF68 [Citrus medica] >YP_009939929.1 hypothetical protein R...	[more]
QJI81180.1	2.0e-29	55.35	hypothetical protein RF68 [Citrus aurantium] >QJI81193.1 hypothetical protein RF...	[more]
QUO98456.1	2.0e-29	56.05	hypothetical chloroplast RF68 [Canarium album] >QUO98473.1 hypothetical chloropl...	[more]

BLAST of Tan0009593 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HP93	4.7e-61	43.86	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3...	[more]
A0A2N9GIA5	4.0e-60	52.32	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26796 PE=3...	[more]
A0A2N9HJI4	3.4e-51	45.35	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39743 PE=3...	[more]
A0A6A5MVI7	1.7e-42	52.56	Uncharacterized protein ycf68 OS=Lupinus albus OX=3870 GN=Lal_00033161 PE=3 SV=1	[more]
A0A2N9G477	1.5e-35	41.25	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22061 PE=3...	[more]

BLAST of Tan0009593 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022546	Uncharacterised protein family Ycf68	PFAM	PF10839	DUF2647	coord: 207..263 e-value: 3.8E-18 score: 65.3
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 176..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009593.1	Tan0009593.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043229	intracellular organelle