Tan0009458 (gene) Snake gourd v1

Overview


Name	Tan0009458
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Serine/threonine-protein kinase AtPK2/AtPK19
Location	LG05: 70844305 .. 70845312 (-)
RNA-Seq Expression	Tan0009458
Synteny	Tan0009458

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGCCATGTATTCTTCTTCCTCCTCCTCCTCCTCCCTAGATTACGTAGTCCTTAGCAAGTGAGAAAGGGATCCATCCACTTGCAAAAAGCCCTAAATTATTCTTTGAAATTTTGAACATGGAATCTCCTTCTAACGAACCCTAACCAAAATTAAACTAAATTCACTCATCTCTCTCTCTCTCCCCCTCCCAAAAAGCAAAGAACCTCAAGACAAAACAATGCTTATTATACTATAAATACAACACAATTTCATCTCTGTTTCTTCATTCCAATCCATTCCATTACAGCTATGATCGGTAAAGAAAGCAGATCCAGCGAATCGCTCTGCGAGAAATCGATGCTGTTGGTAGCGAATTTAATCAAGCTTTCCAGCTCTATTTCTTTCGCCAAGACGGCGGATGAAGGATCTAGGGCGGCTGGGCGGCGATCGGGAGGAAATCCGGCGGCGACGCCTCTAATTCCGGGAAGTAGACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATCTACTTGACGAAGCCGGGCGGAGGCGGCTTCCAAATCGGCCATGGATCGCCGAGGTATTCGTCGTCGTCTTCTTCTTCTTCGTATTTGATTCACGAAGAGAGTGATTTTGATGAGGCGAATGTGGATGGTTGGGCGTCTGAGTACATAGAGAAAGTTCATAAGAACAGGAAGGATTTGGATGAATCGACGATGAAGAAACCATATTCAATTGCTAAAAGTCGTCTTCGAAGAGCCTCCTCTGTTCTGAACTAATTAACTAGGTTTGGGGGGGTGCAAAATAAACCTATCTTTTCTGAATTTAATCACTGTTTATTAATTTCTAATTGCTGGTAATTGATTATTATGCTGCTTTTGATGAATTATATCTTTTATGCCAATTAGTTTTGATAGTCAAGTTATCTCTATGTGAATAATAATGGAGTTGGTATGAAACTAATGGTCAAATTTAGCATAATTTACTCGTAAGTACTCTCAATCAAAAGCTCTGATCCGAACTCACC

mRNA sequence

TGGCCATGTATTCTTCTTCCTCCTCCTCCTCCTCCCTAGATTACGTAGTCCTTAGCAAGTGAGAAAGGGATCCATCCACTTGCAAAAAGCCCTAAATTATTCTTTGAAATTTTGAACATGGAATCTCCTTCTAACGAACCCTAACCAAAATTAAACTAAATTCACTCATCTCTCTCTCTCTCCCCCTCCCAAAAAGCAAAGAACCTCAAGACAAAACAATGCTTATTATACTATAAATACAACACAATTTCATCTCTGTTTCTTCATTCCAATCCATTCCATTACAGCTATGATCGGTAAAGAAAGCAGATCCAGCGAATCGCTCTGCGAGAAATCGATGCTGTTGGTAGCGAATTTAATCAAGCTTTCCAGCTCTATTTCTTTCGCCAAGACGGCGGATGAAGGATCTAGGGCGGCTGGGCGGCGATCGGGAGGAAATCCGGCGGCGACGCCTCTAATTCCGGGAAGTAGACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATCTACTTGACGAAGCCGGGCGGAGGCGGCTTCCAAATCGGCCATGGATCGCCGAGGTATTCGTCGTCGTCTTCTTCTTCTTCGTATTTGATTCACGAAGAGAGTGATTTTGATGAGGCGAATGTGGATGGTTGGGCGTCTGAGTACATAGAGAAAGTTCATAAGAACAGGAAGGATTTGGATGAATCGACGATGAAGAAACCATATTCAATTGCTAAAAGTCGTCTTCGAAGAGCCTCCTCTGTTCTGAACTAATTAACTAGGTTTGGGGGGGTGCAAAATAAACCTATCTTTTCTGAATTTAATCACTGTTTATTAATTTCTAATTGCTGGTAATTGATTATTATGCTGCTTTTGATGAATTATATCTTTTATGCCAATTAGTTTTGATAGTCAAGTTATCTCTATGTGAATAATAATGGAGTTGGTATGAAACTAATGGTCAAATTTAGCATAATTTACTCGTAAGTACTCTCAATCAAAAGCTCTGATCCGAACTCACC

Coding sequence (CDS)

ATGATCGGTAAAGAAAGCAGATCCAGCGAATCGCTCTGCGAGAAATCGATGCTGTTGGTAGCGAATTTAATCAAGCTTTCCAGCTCTATTTCTTTCGCCAAGACGGCGGATGAAGGATCTAGGGCGGCTGGGCGGCGATCGGGAGGAAATCCGGCGGCGACGCCTCTAATTCCGGGAAGTAGACGGCTGCAGGAGCCGCAGAGCCGAGCGAAGCCGATCTACTTGACGAAGCCGGGCGGAGGCGGCTTCCAAATCGGCCATGGATCGCCGAGGTATTCGTCGTCGTCTTCTTCTTCTTCGTATTTGATTCACGAAGAGAGTGATTTTGATGAGGCGAATGTGGATGGTTGGGCGTCTGAGTACATAGAGAAAGTTCATAAGAACAGGAAGGATTTGGATGAATCGACGATGAAGAAACCATATTCAATTGCTAAAAGTCGTCTTCGAAGAGCCTCCTCTGTTCTGAACTAA

Protein sequence

MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADEGSRAAGRRSGGNPAATPLIPGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVDGWASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRASSVLN

Homology

[Close]

BLAST of Tan0009458 vs. NCBI nr
Match: XP_022954798.1 (uncharacterized protein LOC111456949 [Cucurbita moschata])

HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 141/161 (87.58%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE---GSRAAGRRSGGNPAATPLI 60
           MIGKE RSSESLCEKSMLLVANLIKLSSSISFAKTA+E   GSRAAGR+S GNPA TPLI
Sbjct: 1   MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAGRQSRGNPATTPLI 60

Query: 61  PGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSS--SSSSYLIHEESDFDEANVD 120
           PGSRRLQEPQSRAKPIY+TKPGGGGFQIGHGSPRYSS S  S SSYLI EESDF EANVD
Sbjct: 61  PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSLPSPSSYLIREESDFVEANVD 120

Query: 121 GWASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRASSVLN 157
           GWASEYIEKVHKNRK+LDEST KKPYSIA+SRLRRASS  N
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 161

[Close]

BLAST of Tan0009458 vs. NCBI nr
Match: XP_023541667.1 (uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 6.7e-62
Identity = 139/161 (86.34%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE---GSRAAGRRSGGNPAATPLI 60
           MIGKE RSSESLCEKSMLLVANLIKLSSSISFAKTA+E   GSRAA R+S GNPA TPLI
Sbjct: 1   MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPATTPLI 60

Query: 61  PGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYS--SSSSSSSYLIHEESDFDEANVD 120
           PGSRRLQEPQSRAKPIY+TKPGGGGFQIGHGSPRYS  SS S SSYLI EESDF EANVD
Sbjct: 61  PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSSPSPSSYLIREESDFIEANVD 120

Query: 121 GWASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRASSVLN 157
           GWASEYIEKVHKNRK+LDEST KKPY IA+SRLRRASS  N
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYPIAESRLRRASSARN 161

[Close]

BLAST of Tan0009458 vs. NCBI nr
Match: XP_022994676.1 (uncharacterized protein LOC111490318 [Cucurbita maxima])

HSP 1 Score: 245.7 bits (626), Expect = 2.6e-61
Identity = 138/159 (86.79%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE---GSRAAGRRSGGNPAATPLI 60
           MI KE RSSESLCEKSMLLVANLIKLSSSISFAKTA+E   GSRAA R+S GNPA TPLI
Sbjct: 1   MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPAKTPLI 60

Query: 61  PGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVDGW 120
           PGSRRLQEPQSRAKPIY+TKPGGGGFQIGHGSPRY SS S SSYLI EESDF EANVDGW
Sbjct: 61  PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRY-SSPSPSSYLIREESDFIEANVDGW 120

Query: 121 ASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRASSVLN 157
           ASEYIEKVHKNRK+LDEST KKPYSIA+SRLRRASS  N
Sbjct: 121 ASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 158

[Close]

BLAST of Tan0009458 vs. NCBI nr
Match: TYJ99125.1 (hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa])

HSP 1 Score: 234.6 bits (597), Expect = 5.9e-58
Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE----GSRAAGRRSGGNPAATPL 60
           MI KESRS+ESLCEKSMLLVANLIKLSSSISFAKTA+     GS    RRSGGNPAATPL
Sbjct: 1   MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAGSPTTRRRSGGNPAATPL 60

Query: 61  IPGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVDG 120
           IPGS+RLQEPQSRAKPIY+TKPGGGGFQIGHGSP    S+SSSS +I+EESDFDEANVDG
Sbjct: 61  IPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSSVIYEESDFDEANVDG 120

Query: 121 WASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRA-SSVLN 157
           WASEYIEKVHKNRKD ++STMKKP S+AKSR RR  SSVLN
Sbjct: 121 WASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 161

[Close]

BLAST of Tan0009458 vs. NCBI nr
Match: KGN64274.1 (hypothetical protein Csa_013446 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-57
Identity = 130/162 (80.25%), Postives = 140/162 (86.42%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE-----GSRAAGRRSGGNPAATP 60
           MIGKESRS+ESLCEKSMLLVANLIKLSSSISFA+TA+       S    RRSGGNPAATP
Sbjct: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60

Query: 61  LIPGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVD 120
           LIPGS+RLQEPQSRAKPIY+TKPGGGGFQIGHGSP    SSSSSS +I+EESDFDE NVD
Sbjct: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120

Query: 121 GWASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRA-SSVLN 157
           GWASEYIEKVHKNRKD ++STMKKP S+AKSR RR  SSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 162

[Close]

BLAST of Tan0009458 vs. ExPASy TrEMBL
Match: A0A6J1GS37 (uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC111456949 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.8e-64
Identity = 141/161 (87.58%), Postives = 146/161 (90.68%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE---GSRAAGRRSGGNPAATPLI 60
           MIGKE RSSESLCEKSMLLVANLIKLSSSISFAKTA+E   GSRAAGR+S GNPA TPLI
Sbjct: 1   MIGKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAGRQSRGNPATTPLI 60

Query: 61  PGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSS--SSSSYLIHEESDFDEANVD 120
           PGSRRLQEPQSRAKPIY+TKPGGGGFQIGHGSPRYSS S  S SSYLI EESDF EANVD
Sbjct: 61  PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSPSLPSPSSYLIREESDFVEANVD 120

Query: 121 GWASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRASSVLN 157
           GWASEYIEKVHKNRK+LDEST KKPYSIA+SRLRRASS  N
Sbjct: 121 GWASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 161

[Close]

BLAST of Tan0009458 vs. ExPASy TrEMBL
Match: A0A6J1JZU4 (uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 138/159 (86.79%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE---GSRAAGRRSGGNPAATPLI 60
           MI KE RSSESLCEKSMLLVANLIKLSSSISFAKTA+E   GSRAA R+S GNPA TPLI
Sbjct: 1   MISKERRSSESLCEKSMLLVANLIKLSSSISFAKTANEVTAGSRAAVRQSRGNPAKTPLI 60

Query: 61  PGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVDGW 120
           PGSRRLQEPQSRAKPIY+TKPGGGGFQIGHGSPRY SS S SSYLI EESDF EANVDGW
Sbjct: 61  PGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRY-SSPSPSSYLIREESDFIEANVDGW 120

Query: 121 ASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRASSVLN 157
           ASEYIEKVHKNRK+LDEST KKPYSIA+SRLRRASS  N
Sbjct: 121 ASEYIEKVHKNRKNLDESTAKKPYSIAESRLRRASSARN 158

[Close]

BLAST of Tan0009458 vs. ExPASy TrEMBL
Match: A0A5D3BLA2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003300 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.9e-58
Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE----GSRAAGRRSGGNPAATPL 60
           MI KESRS+ESLCEKSMLLVANLIKLSSSISFAKTA+     GS    RRSGGNPAATPL
Sbjct: 1   MIRKESRSTESLCEKSMLLVANLIKLSSSISFAKTANNEATAGSPTTRRRSGGNPAATPL 60

Query: 61  IPGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVDG 120
           IPGS+RLQEPQSRAKPIY+TKPGGGGFQIGHGSP    S+SSSS +I+EESDFDEANVDG
Sbjct: 61  IPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSTSSSSSVIYEESDFDEANVDG 120

Query: 121 WASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRA-SSVLN 157
           WASEYIEKVHKNRKD ++STMKKP S+AKSR RR  SSVLN
Sbjct: 121 WASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 161

[Close]

BLAST of Tan0009458 vs. ExPASy TrEMBL
Match: A0A0A0LTD3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.9e-58
Identity = 130/162 (80.25%), Postives = 140/162 (86.42%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE-----GSRAAGRRSGGNPAATP 60
           MIGKESRS+ESLCEKSMLLVANLIKLSSSISFA+TA+       S    RRSGGNPAATP
Sbjct: 1   MIGKESRSTESLCEKSMLLVANLIKLSSSISFARTANNEPTAGSSTTTRRRSGGNPAATP 60

Query: 61  LIPGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRYSSSSSSSSYLIHEESDFDEANVD 120
           LIPGS+RLQEPQSRAKPIY+TKPGGGGFQIGHGSP    SSSSSS +I+EESDFDE NVD
Sbjct: 61  LIPGSKRLQEPQSRAKPIYVTKPGGGGFQIGHGSPSPRYSSSSSSSVIYEESDFDEGNVD 120

Query: 121 GWASEYIEKVHKNRKDLDESTMKKPYSIAKSRLRRA-SSVLN 157
           GWASEYIEKVHKNRKD ++STMKKP S+AKSR RR  SSVLN
Sbjct: 121 GWASEYIEKVHKNRKDFEQSTMKKPKSMAKSRFRRTNSSVLN 162

[Close]

BLAST of Tan0009458 vs. ExPASy TrEMBL
Match: A0A6J1KL49 (uncharacterized protein LOC111495176 OS=Cucurbita maxima OX=3661 GN=LOC111495176 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 124/164 (75.61%), Postives = 138/164 (84.15%), Query Frame = 0


Query: 1   MIGKESRSSESLCEKSMLLVANLIKLSSSISFAKTADE---GSRAAGRRSGGNPAATPLI 60
           MIGKE RSSESLCEKSMLL+ANLIKLSSSISFA TA+E   G+ A  +RSGGN AATPLI
Sbjct: 1   MIGKEGRSSESLCEKSMLLLANLIKLSSSISFANTANEATAGTSATRQRSGGNSAATPLI 60

Query: 61  PGSRRLQEPQSRAKPIYLTKPGGGGFQIGHGSPRY----SSSSSSSSYLIHEESDFDEAN 120
           PGSRRLQEPQSRAKPIY+TKPGG GFQI HGSPRY    SSSSSSSS +IH ESD DEAN
Sbjct: 61  PGSRRLQEPQSRAKPIYVTKPGGDGFQISHGSPRYSPSSSSSSSSSSNVIHGESDCDEAN 120

Query: 121 VDGWASEYIEKVHKNRKDLDE-STMKKPYSIAKSRLRRASSVLN 157
           VDGWA +YIE+VH+NRKD D+  T +KPYS+ K+R RR +SVLN
Sbjct: 121 VDGWAYKYIERVHRNRKDFDQYPTNEKPYSMGKNRHRRVTSVLN 164

The following BLAST results are available for this feature:

BLAST of Tan0009458 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0009458 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954798.1	1.6e-63	87.58	uncharacterized protein LOC111456949 [Cucurbita moschata]	[more]
XP_023541667.1	6.7e-62	86.34	uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo]	[more]
XP_022994676.1	2.6e-61	86.79	uncharacterized protein LOC111490318 [Cucurbita maxima]	[more]
TYJ99125.1	5.9e-58	81.37	hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa]	[more]
KGN64274.1	1.0e-57	80.25	hypothetical protein Csa_013446 [Cucumis sativus]	[more]

BLAST of Tan0009458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS37	7.8e-64	87.58	uncharacterized protein LOC111456949 OS=Cucurbita moschata OX=3662 GN=LOC1114569...	[more]
A0A6J1JZU4	1.2e-61	86.79	uncharacterized protein LOC111490318 OS=Cucurbita maxima OX=3661 GN=LOC111490318...	[more]
A0A5D3BLA2	2.9e-58	81.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LTD3	4.9e-58	80.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045720 PE=4 SV=1	[more]
A0A6J1KL49	1.6e-53	75.61	uncharacterized protein LOC111495176 OS=Cucurbita maxima OX=3661 GN=LOC111495176...	[more]

BLAST of Tan0009458 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009458.1	Tan0009458.1	mRNA