Tan0009371 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATAAGTCTATCCACTCACTCTCACACCGCGTTGTTTTCAGAAACCCACTTCGAAATTTCCCTCTCCCTCAACTCAGCTCACAAATTCCCAATTCCATAAAAACCCACCAAAGAATTAGAAGAAATTAGCAAAGCAACCCAAAAATGGGTGTTGATCACAAAACCCAGAAGGAAGGAATTAGAAGAAGGGCGCCATTTTTTAGGCCAAAATTGTGGGCTGCAGCGTTGGGGTGTGGAGTGATTGTACTGTTTTGTTTGGTACAATTGCGGAATTATTACTATTATTATTATTATTGCAGTAGTAGCGTGGTAATTGTGGTGGGTGGTTTGTTGGTTTGGTTAGCGATGGCGTCGGCTGCTGCAGTGGTGGTGGCTGCGGCGGTGGTAACGTGGATCACGGTGGTGGTTTTGTTGGCGTTCATCGGGAGGCCGAGAAGGAGGTTGGTGGCGGAAGGGATAAGGATTAGTAAAGAGATAATGATAGGGCTTCTGGTCAAGGTTTTGTTGAAGGAAGGCAACGTTTTGGCTGCCCTTTGCGCTGCTGTTTTTGGTTGCTTGGCGTTGGCTTGGGGTCCACCATTGCTACCCACTGCTAATTATTTTAGTTGAGATTGGATTTCGCTAACCATCAAGTTTGTGTTAAAATTATTAGATGTGGCCGCCACAATTTCATCGCTCTTTATCAGAGGTAGACCACTTAGAGTTGGTATATTTGTGACAATATGTTATGTAATTTTTGTTATATATCCAACGATTTAAAACTATCAGCGGAGAGATGCTTTTTTTTTTTTTTTAATATCTTTTTGTATGGGTGTCTTTCTTGATGTTAATTATTAACTATACTACTACTAGTATGAGTAATTTTTGTTTTTAATGAATAGTTTTGTGATAATTAAAAGAGAAAAGCTAAAGAAGGAGCTTCTTGGGCTTATCTTTCTTCGTTTCTTGTGGGGAGAATTTTAAGGATGGTTTTATGTTTCAAAGTTGTCGCAAGTACGATGTAAAATCAGATATGCTTTAATTTGATATTGTCTAACATGGAAGCATTTGAGGTCTATTGTTAGATTGATATGGGCCAAAAGAATCGCAGAG CATAAGTCTATCCACTCACTCTCACACCGCGTTGTTTTCAGAAACCCACTTCGAAATTTCCCTCTCCCTCAACTCAGCTCACAAATTCCCAATTCCATAAAAACCCACCAAAGAATTAGAAGAAATTAGCAAAGCAACCCAAAAATGGGTGTTGATCACAAAACCCAGAAGGAAGGAATTAGAAGAAGGGCGCCATTTTTTAGGCCAAAATTGTGGGCTGCAGCGTTGGGGTGTGGAGTGATTGTACTGTTTTGTTTGGTACAATTGCGGAATTATTACTATTATTATTATTATTGCAGTAGTAGCGTGGTAATTGTGGTGGGTGGTTTGTTGGTTTGGTTAGCGATGGCGTCGGCTGCTGCAGTGGTGGTGGCTGCGGCGGTGGTAACGTGGATCACGGTGGTGGTTTTGTTGGCGTTCATCGGGAGGCCGAGAAGGAGGTTGGTGGCGGAAGGGATAAGGATTAGTAAAGAGATAATGATAGGGCTTCTGGTCAAGGTTTTGTTGAAGGAAGGCAACGTTTTGGCTGCCCTTTGCGCTGCTGTTTTTGGTTGCTTGGCGTTGGCTTGGGGTCCACCATTGCTACCCACTGCTAATTATTTTAGTTGAGATTGGATTTCGCTAACCATCAAGTTTGTGTTAAAATTATTAGATGTGGCCGCCACAATTTCATCGCTCTTTATCAGAGGTAGACCACTTAGAGTTGGTATATTTGTGACAATATGTTATGTAATTTTTGTTATATATCCAACGATTTAAAACTATCAGCGGAGAGATGCTTTTTTTTTTTTTTTAATATCTTTTTGTATGGGTGTCTTTCTTGATGTTAATTATTAACTATACTACTACTAGTATGAGTAATTTTTGTTTTTAATGAATAGTTTTGTGATAATTAAAAGAGAAAAGCTAAAGAAGGAGCTTCTTGGGCTTATCTTTCTTCGTTTCTTGTGGGGAGAATTTTAAGGATGGTTTTATGTTTCAAAGTTGTCGCAAGTACGATGTAAAATCAGATATGCTTTAATTTGATATTGTCTAACATGGAAGCATTTGAGGTCTATTGTTAGATTGATATGGGCCAAAAGAATCGCAGAG ATGGGTGTTGATCACAAAACCCAGAAGGAAGGAATTAGAAGAAGGGCGCCATTTTTTAGGCCAAAATTGTGGGCTGCAGCGTTGGGGTGTGGAGTGATTGTACTGTTTTGTTTGGTACAATTGCGGAATTATTACTATTATTATTATTATTGCAGTAGTAGCGTGGTAATTGTGGTGGGTGGTTTGTTGGTTTGGTTAGCGATGGCGTCGGCTGCTGCAGTGGTGGTGGCTGCGGCGGTGGTAACGTGGATCACGGTGGTGGTTTTGTTGGCGTTCATCGGGAGGCCGAGAAGGAGGTTGGTGGCGGAAGGGATAAGGATTAGTAAAGAGATAATGATAGGGCTTCTGGTCAAGGTTTTGTTGAAGGAAGGCAACGTTTTGGCTGCCCTTTGCGCTGCTGTTTTTGGTTGCTTGGCGTTGGCTTGGGGTCCACCATTGCTACCCACTGCTAATTATTTTAGTTGA MGVDHKTQKEGIRRRAPFFRPKLWAAALGCGVIVLFCLVQLRNYYYYYYYCSSSVVIVVGGLLVWLAMASAAAVVVAAAVVTWITVVVLLAFIGRPRRRLVAEGIRISKEIMIGLLVKVLLKEGNVLAALCAAVFGCLALAWGPPLLPTANYFS Homology
BLAST of Tan0009371 vs. NCBI nr
Match: XP_022970724.1 (uncharacterized protein LOC111469624 [Cucurbita maxima]) HSP 1 Score: 163.7 bits (413), Expect = 1.3e-36 Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 0
BLAST of Tan0009371 vs. NCBI nr
Match: XP_022947668.1 (uncharacterized protein LOC111451463 [Cucurbita moschata]) HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33 Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 0
BLAST of Tan0009371 vs. NCBI nr
Match: XP_023534045.1 (uncharacterized protein LOC111795714 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 151.0 bits (380), Expect = 8.5e-33 Identity = 92/141 (65.25%), Postives = 108/141 (76.60%), Query Frame = 0
BLAST of Tan0009371 vs. NCBI nr
Match: XP_038902352.1 (uncharacterized protein LOC120088986 [Benincasa hispida]) HSP 1 Score: 112.8 bits (281), Expect = 2.6e-21 Identity = 76/142 (53.52%), Postives = 93/142 (65.49%), Query Frame = 0
BLAST of Tan0009371 vs. NCBI nr
Match: KAE8646853.1 (hypothetical protein Csa_020628 [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.9e-16 Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 0
BLAST of Tan0009371 vs. ExPASy TrEMBL
Match: A0A6J1I6G7 (uncharacterized protein LOC111469624 OS=Cucurbita maxima OX=3661 GN=LOC111469624 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 6.1e-37 Identity = 100/150 (66.67%), Postives = 115/150 (76.67%), Query Frame = 0
BLAST of Tan0009371 vs. ExPASy TrEMBL
Match: A0A6J1G791 (uncharacterized protein LOC111451463 OS=Cucurbita moschata OX=3662 GN=LOC111451463 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 8.3e-34 Identity = 95/145 (65.52%), Postives = 111/145 (76.55%), Query Frame = 0
BLAST of Tan0009371 vs. ExPASy TrEMBL
Match: A0A0A0KE95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127980 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 9.2e-17 Identity = 76/150 (50.67%), Postives = 93/150 (62.00%), Query Frame = 0
BLAST of Tan0009371 vs. ExPASy TrEMBL
Match: A0A5N6RDW9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014621 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.7e-10 Identity = 47/84 (55.95%), Postives = 66/84 (78.57%), Query Frame = 0
BLAST of Tan0009371 vs. ExPASy TrEMBL
Match: A0A2N9F0Z5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS8423 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.2e-10 Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = 0
BLAST of Tan0009371 vs. TAIR 10
Match: AT4G03600.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of Tan0009371 vs. TAIR 10
Match: AT1G03730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 50 Blast hits to 50 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 40/78 (51.28%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of Tan0009371 vs. TAIR 10
Match: AT4G28330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28340.1); Has 48 Blast hits to 48 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 4.1e-09 Identity = 37/76 (48.68%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Tan0009371 vs. TAIR 10
Match: AT4G28340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28330.1); Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 5.9e-08 Identity = 36/78 (46.15%), Postives = 55/78 (70.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|