Tan0009292 (gene) Snake gourd v1

Overview
NameTan0009292
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
LocationLG03: 42856361 .. 42857080 (+)
RNA-Seq ExpressionTan0009292
SyntenyTan0009292
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTCACTACTTCCACACCCATTCAGTATCGTCTTTATGGCCACAGCACCACCCCTTCCGCCCACCGTTCCCATCAAACTCTGGAAGTCCGATTACACTATCTCTACCGTCTGATCTACGTTTCTCCCTCCGCCGGAGTTCCTCCCCAAACCATCCATGAAACCGCACCCACCCTACTGAAAAATGCTCTGTTCCATCTCTCTCTGCGCCAACTCCAGGATCCCTTGTCCTACGTCACACAGTTCCTCTCCTCACTCAACATCCGCGCCGCTGTTTGCGATATCATTGCTCCGCATATCGCGTCCTTCATCACCCAAATCTCCGGCGAAAACAGAGAGACGAACTTTCACTTTGTCGCGGAGGTCGATTTCATCCGACTGATCACCTGGATGGGAATAACTCCTCAACCGTACCAGGGATGGATCAACGGTGGTGCGATGGTGGAGGAAACGGTGGTTTTAGAAGAAGCTCCGCCGGCGAGGAGAGGAGTGGCGGAGACTGCGATGGAGAGGTTGAGAATGGAGAAATTGGAAGAGAATGAGGAAGATGATGATTTTGGGGATTGCAGTATCTGTTTGAATGAAATGAATTGCAAGAAGAGAGAGGTGATAAAAATCCCCTGCGGGCATGTGTATCATCAATCATGCATCTTCAAGTGGCTTAACACTAACAATTCTTGCCCTTTGTGTAGAAGGCCATTGCCATTGGAGAACTGA

mRNA sequence

ATGTCTTTCACTACTTCCACACCCATTCAGTATCGTCTTTATGGCCACAGCACCACCCCTTCCGCCCACCGTTCCCATCAAACTCTGGAAGTCCGATTACACTATCTCTACCGTCTGATCTACGTTTCTCCCTCCGCCGGAGTTCCTCCCCAAACCATCCATGAAACCGCACCCACCCTACTGAAAAATGCTCTGTTCCATCTCTCTCTGCGCCAACTCCAGGATCCCTTGTCCTACGTCACACAGTTCCTCTCCTCACTCAACATCCGCGCCGCTGTTTGCGATATCATTGCTCCGCATATCGCGTCCTTCATCACCCAAATCTCCGGCGAAAACAGAGAGACGAACTTTCACTTTGTCGCGGAGGTCGATTTCATCCGACTGATCACCTGGATGGGAATAACTCCTCAACCGTACCAGGGATGGATCAACGGTGGTGCGATGGTGGAGGAAACGGTGGTTTTAGAAGAAGCTCCGCCGGCGAGGAGAGGAGTGGCGGAGACTGCGATGGAGAGGTTGAGAATGGAGAAATTGGAAGAGAATGAGGAAGATGATGATTTTGGGGATTGCAGTATCTGTTTGAATGAAATGAATTGCAAGAAGAGAGAGGTGATAAAAATCCCCTGCGGGCATGTGTATCATCAATCATGCATCTTCAAGTGGCTTAACACTAACAATTCTTGCCCTTTGTGTAGAAGGCCATTGCCATTGGAGAACTGA

Coding sequence (CDS)

ATGTCTTTCACTACTTCCACACCCATTCAGTATCGTCTTTATGGCCACAGCACCACCCCTTCCGCCCACCGTTCCCATCAAACTCTGGAAGTCCGATTACACTATCTCTACCGTCTGATCTACGTTTCTCCCTCCGCCGGAGTTCCTCCCCAAACCATCCATGAAACCGCACCCACCCTACTGAAAAATGCTCTGTTCCATCTCTCTCTGCGCCAACTCCAGGATCCCTTGTCCTACGTCACACAGTTCCTCTCCTCACTCAACATCCGCGCCGCTGTTTGCGATATCATTGCTCCGCATATCGCGTCCTTCATCACCCAAATCTCCGGCGAAAACAGAGAGACGAACTTTCACTTTGTCGCGGAGGTCGATTTCATCCGACTGATCACCTGGATGGGAATAACTCCTCAACCGTACCAGGGATGGATCAACGGTGGTGCGATGGTGGAGGAAACGGTGGTTTTAGAAGAAGCTCCGCCGGCGAGGAGAGGAGTGGCGGAGACTGCGATGGAGAGGTTGAGAATGGAGAAATTGGAAGAGAATGAGGAAGATGATGATTTTGGGGATTGCAGTATCTGTTTGAATGAAATGAATTGCAAGAAGAGAGAGGTGATAAAAATCCCCTGCGGGCATGTGTATCATCAATCATGCATCTTCAAGTGGCTTAACACTAACAATTCTTGCCCTTTGTGTAGAAGGCCATTGCCATTGGAGAACTGA

Protein sequence

MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTLLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFVAEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPARRGVAETAMERLRMEKLEENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLEN
Homology
BLAST of Tan0009292 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-10
Identity = 28/88 (31.82%), Postives = 53/88 (60.23%), Query Frame = 0

Query: 155 LEEAPPARRG---VAETAMERLRMEKLEENEEDDDFGDCSICLNEMNCKKREVIKIPCGH 214
           L E  P R G    +++A+E L +  + ++  + +F  C++C+++   +  E  ++PC H
Sbjct: 186 LAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKH 245

Query: 215 VYHQSCIFKWLNTNNSCPLCRRPLPLEN 240
           +YH+ C+  WL  +NSCP+CR  LP ++
Sbjct: 246 LYHKDCLLPWLELHNSCPVCRHELPTDD 272

BLAST of Tan0009292 vs. ExPASy Swiss-Prot
Match: Q6AXU4 (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-09
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0

Query: 159 PPARRGVAETAMER-LRMEKLEENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSC 218
           PPA + V E+     +R  K E          C +CL E   ++  VI++PC H++H +C
Sbjct: 64  PPAAKAVVESLPRTVIRSSKAELK--------CPVCLLEFE-EEETVIEMPCHHLFHSNC 123

Query: 219 IFKWLNTNNSCPLCRRPLPLEN 240
           I  WL+  NSCPLCR  LP ++
Sbjct: 124 ILPWLSKTNSCPLCRHELPTDD 136

BLAST of Tan0009292 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-09
Identity = 29/88 (32.95%), Postives = 51/88 (57.95%), Query Frame = 0

Query: 155 LEEAPPARRG---VAETAMERLRMEKLEENEEDDDFGDCSICLNEMNCKKREVIKIPCGH 214
           L E  P R G    +++A++ L   K+ ++    +   C++C++E      +V ++PC H
Sbjct: 178 LAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKH 237

Query: 215 VYHQSCIFKWLNTNNSCPLCRRPLPLEN 240
           V+HQ C+  WL  +NSCP+CR  LP ++
Sbjct: 238 VFHQDCLLPWLELHNSCPVCRFELPTDD 264

BLAST of Tan0009292 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 26/58 (44.83%), Postives = 35/58 (60.34%), Query Frame = 0

Query: 182 EEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLEN 240
           E+ D    C +CL E   ++  V ++PC H++H  CI  WLN  NSCPLCR  LP +N
Sbjct: 71  EQADKGVKCPVCLLEFE-EQESVREMPCKHLFHTGCILPWLNKTNSCPLCRLELPTDN 127

BLAST of Tan0009292 vs. ExPASy Swiss-Prot
Match: Q9NVW2 (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-08
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 0

Query: 163 RGVAETAMERLRMEKLEENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWL 222
           RG+ +  ++ L M    EN   D    CS+C+ E   +  ++ K+PC H YH  CI +WL
Sbjct: 546 RGLTKEQIDNLAMRSFGEN---DALKTCSVCITEYT-EGNKLRKLPCSHEYHVHCIDRWL 605

Query: 223 NTNNSCPLCRR 234
           + N++CP+CRR
Sbjct: 606 SENSTCPICRR 612

BLAST of Tan0009292 vs. NCBI nr
Match: KAG6603237.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-64
Identity = 134/238 (56.30%), Postives = 165/238 (69.33%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  STPIQYRLY   T  +   +H+ LEVR+    RLI  S   GVPPQ + ET PT 
Sbjct: 1   MSFAASTPIQYRLY---TAAAQSETHKALEVRMRSFNRLISASSFTGVPPQILFETRPTP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
           + +ALFHLSLRQL DPL ++ + LS+L+I AA C++I   IAS ITQ+S  NRET+FH V
Sbjct: 61  VNDALFHLSLRQLHDPLFHIPRLLSTLDIHAAACEVIGWKIASQITQLSAGNRETSFHIV 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPARRGVAETAMERLRMEKLEE 180
            EVDFI+ I WMG     +QG  NGG +VEET+VL+E P  RR       +R  +    E
Sbjct: 121 VEVDFIQNI-WMGQVAGMHQGQGNGGGLVEETLVLDELPARRR-------QRRGVVARVE 180

Query: 181 NEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLE 239
            EE+ + GDC ICL+EM  KKREVI+ PCGHVYH+SCIF+WLN +NSCPLC+RPLPLE
Sbjct: 181 VEEEKELGDCCICLDEMMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLE 227

BLAST of Tan0009292 vs. NCBI nr
Match: KAG6603243.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-63
Identity = 133/238 (55.88%), Postives = 164/238 (68.91%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  STPIQYRLY   T  +   +H+ LEVR+    RLI  S   GVPPQ + ET PT 
Sbjct: 1   MSFAASTPIQYRLY---TAAAQSETHKALEVRMRSFNRLISASSFPGVPPQILFETRPTP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
           + +ALFHLSLRQL DPL ++ + LS+L+I AA C++I   IAS I Q+S  NRET+FH V
Sbjct: 61  VNDALFHLSLRQLHDPLFHIPRLLSTLHIHAAACEVIGWKIASQIAQLSAGNRETSFHIV 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPARRGVAETAMERLRMEKLEE 180
            EVDFI+ I WMG     +QG  NGG +VEET+VL+E P  RR       +R  +    E
Sbjct: 121 VEVDFIQNI-WMGQVAGMHQGQGNGGGLVEETLVLDELPARRR-------QRRGVVARVE 180

Query: 181 NEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLE 239
            EE+ + GDC ICL+EM  KKREVI+ PCGHVYH+SCIF+WLN +NSCPLC+RPLPLE
Sbjct: 181 VEEEKELGDCCICLDEMMNKKREVIRTPCGHVYHESCIFQWLNLHNSCPLCKRPLPLE 227

BLAST of Tan0009292 vs. NCBI nr
Match: XP_038883574.1 (E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 1.4e-63
Identity = 131/239 (54.81%), Postives = 164/239 (68.62%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MS   STPIQYRLYG      +   +  LEV+  Y  R+I VSP  G PP+ +HET    
Sbjct: 1   MSSAASTPIQYRLYG----TGSGTGNGVLEVQTSYFERMISVSPVTGRPPRILHETPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NALF+LSL QLQ+PL Y++QFLSSLNI  A C+I+A  IAS+I ++  ENRE+NF  +
Sbjct: 61  FHNALFYLSLHQLQNPLFYISQFLSSLNICPAACEIMARQIASYIDRMINENRESNFRII 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPARRGVAETAMERLRMEKLEE 180
           AEVDF R+I WM            G AM EETVV +EAPP RRGV + A+ER+R     E
Sbjct: 121 AEVDFSRVI-WM-----EEHSIYGGDAMAEETVVFDEAPPPRRGVEKVAVERVR-----E 180

Query: 181 NEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLEN 240
            +  ++ GDC ICL E++C+KREVI+IPCGHVYH+SC+FKWL  NNSCPLCR+PLPL +
Sbjct: 181 LKSQEELGDCCICLEELSCEKREVIRIPCGHVYHESCVFKWLRKNNSCPLCRKPLPLND 224

BLAST of Tan0009292 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa] >TYK29842.1 E3 ubiquitin-protein ligase RNF181-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 241.1 bits (614), Expect = 9.7e-60
Identity = 129/239 (53.97%), Postives = 163/239 (68.20%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  S PIQYRLYG  T       +  LEVR+ +  ++I +SP  G P Q +H+T    
Sbjct: 1   MSFAISNPIQYRLYGSGT-----GGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NAL +L+LRQLQ PL Y+TQFLSSLNIR A    +A  IAS I Q+   N + NFH +
Sbjct: 61  YHNALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHII 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPA-RRGVAETAMERLRMEKLE 180
           AEVDFIR+I W+ +  Q      + GA  EETVV +EAPPA +RGV +   ERL+ E   
Sbjct: 121 AEVDFIRVI-WLELEEQ------SMGAGAEETVVFDEAPPALKRGVGKARGERLKSE--- 180

Query: 181 ENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLE 239
             E+ +D GDCSICL+E++C+KREVI+IPCGHVYH+SCIFKWL  +NSCPLCR+PLPL+
Sbjct: 181 --EKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLK 222

BLAST of Tan0009292 vs. NCBI nr
Match: XP_004144954.1 (uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_020356 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 6.3e-59
Identity = 130/236 (55.08%), Postives = 160/236 (67.80%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  S PIQYRLY   T       +  L+V + ++ ++I VSP  G P + +H+T    
Sbjct: 1   MSFAISNPIQYRLYASGT-----GGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NALF+LSLRQLQ PL Y+TQ LSSLNIR A    +A  IAS I Q+   N ETNFH +
Sbjct: 61  YHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHIL 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPA-RRGVAETAMERLRMEKLE 180
           AEVDFIRLI W+     P  G   GGA  EETVVL+EAPPA +RGV     ERLR E   
Sbjct: 121 AEVDFIRLI-WL-----PSMG--GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSE--- 180

Query: 181 ENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPL 236
             E+ ++ GDCSICL+E++C+KREV++IPCGHVYH+SCIFKWL  +NSCPLCR+PL
Sbjct: 181 --EKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

BLAST of Tan0009292 vs. ExPASy TrEMBL
Match: A0A5D3E1S5 (E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00800 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.7e-60
Identity = 129/239 (53.97%), Postives = 163/239 (68.20%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  S PIQYRLYG  T       +  LEVR+ +  ++I +SP  G P Q +H+T    
Sbjct: 1   MSFAISNPIQYRLYGSGT-----GGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NAL +L+LRQLQ PL Y+TQFLSSLNIR A    +A  IAS I Q+   N + NFH +
Sbjct: 61  YHNALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHII 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPA-RRGVAETAMERLRMEKLE 180
           AEVDFIR+I W+ +  Q      + GA  EETVV +EAPPA +RGV +   ERL+ E   
Sbjct: 121 AEVDFIRVI-WLELEEQ------SMGAGAEETVVFDEAPPALKRGVGKARGERLKSE--- 180

Query: 181 ENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLE 239
             E+ +D GDCSICL+E++C+KREVI+IPCGHVYH+SCIFKWL  +NSCPLCR+PLPL+
Sbjct: 181 --EKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLK 222

BLAST of Tan0009292 vs. ExPASy TrEMBL
Match: A0A1S4DUZ4 (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.7e-60
Identity = 129/239 (53.97%), Postives = 163/239 (68.20%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  S PIQYRLYG  T       +  LEVR+ +  ++I +SP  G P Q +H+T    
Sbjct: 1   MSFAISNPIQYRLYGSGT-----GGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NAL +L+LRQLQ PL Y+TQFLSSLNIR A    +A  IAS I Q+   N + NFH +
Sbjct: 61  YHNALVYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHII 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPA-RRGVAETAMERLRMEKLE 180
           AEVDFIR+I W+ +  Q      + GA  EETVV +EAPPA +RGV +   ERL+ E   
Sbjct: 121 AEVDFIRVI-WLELEEQ------SMGAGAEETVVFDEAPPALKRGVGKARGERLKSE--- 180

Query: 181 ENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLE 239
             E+ +D GDCSICL+E++C+KREVI+IPCGHVYH+SCIFKWL  +NSCPLCR+PLPL+
Sbjct: 181 --EKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPLPLK 222

BLAST of Tan0009292 vs. ExPASy TrEMBL
Match: A0A0A0K696 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59
Identity = 130/236 (55.08%), Postives = 160/236 (67.80%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  S PIQYRLY   T       +  L+V + ++ ++I VSP  G P + +H+T    
Sbjct: 1   MSFAISNPIQYRLYASGT-----GGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NALF+LSLRQLQ PL Y+TQ LSSLNIR A    +A  IAS I Q+   N ETNFH +
Sbjct: 61  YHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHIL 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPA-RRGVAETAMERLRMEKLE 180
           AEVDFIRLI W+     P  G   GGA  EETVVL+EAPPA +RGV     ERLR E   
Sbjct: 121 AEVDFIRLI-WL-----PSMG--GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSE--- 180

Query: 181 ENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPL 236
             E+ ++ GDCSICL+E++C+KREV++IPCGHVYH+SCIFKWL  +NSCPLCR+PL
Sbjct: 181 --EKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

BLAST of Tan0009292 vs. ExPASy TrEMBL
Match: A0A0A0K2W2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.0e-59
Identity = 130/236 (55.08%), Postives = 160/236 (67.80%), Query Frame = 0

Query: 1   MSFTTSTPIQYRLYGHSTTPSAHRSHQTLEVRLHYLYRLIYVSPSAGVPPQTIHETAPTL 60
           MSF  S PIQYRLY   T       +  L+V + ++ ++I VSP  G P + +H+T    
Sbjct: 1   MSFAISNPIQYRLYASGT-----GGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIP 60

Query: 61  LKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDIIAPHIASFITQISGENRETNFHFV 120
             NALF+LSLRQLQ PL Y+TQ LSSLNIR A    +A  IAS I Q+   N ETNFH +
Sbjct: 61  YHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHIL 120

Query: 121 AEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEEAPPA-RRGVAETAMERLRMEKLE 180
           AEVDFIRLI W+     P  G   GGA  EETVVL+EAPPA +RGV     ERLR E   
Sbjct: 121 AEVDFIRLI-WL-----PSMG--GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSE--- 180

Query: 181 ENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPL 236
             E+ ++ GDCSICL+E++C+KREV++IPCGHVYH+SCIFKWL  +NSCPLCR+PL
Sbjct: 181 --EKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 218

BLAST of Tan0009292 vs. ExPASy TrEMBL
Match: A0A6J1EKL4 (E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111435522 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 3.5e-55
Identity = 116/201 (57.71%), Postives = 141/201 (70.15%), Query Frame = 0

Query: 38  RLIYVSPSAGVPPQTIHETAPTLLKNALFHLSLRQLQDPLSYVTQFLSSLNIRAAVCDII 97
           RLI  S   GVPPQ + ET PT + +ALFHLSLRQL DPL ++ + LS+L+I AA C++I
Sbjct: 6   RLISASSFPGVPPQILFETRPTPVNDALFHLSLRQLHDPLFHIPRLLSTLDIHAAACEVI 65

Query: 98  APHIASFITQISGENRETNFHFVAEVDFIRLITWMGITPQPYQGWINGGAMVEETVVLEE 157
              IAS I Q+S  NRET+FH V EVDFI+ I WMG      QG  NGG +VEETVVL+E
Sbjct: 66  GWKIASQIAQLSAGNRETSFHIVVEVDFIQNI-WMGQVAGMRQGQGNGGGLVEETVVLDE 125

Query: 158 APPARRGVAETAMERLRMEKLEENEEDDDFGDCSICLNEMNCKKREVIKIPCGHVYHQSC 217
            P  RR       +R  +    E EE+ + GDC ICL+EM  KKREVI+ PCGHVYH+SC
Sbjct: 126 LPARRR-------QRRGVVARVEVEEEKELGDCCICLDEMMNKKREVIRTPCGHVYHESC 185

Query: 218 IFKWLNTNNSCPLCRRPLPLE 239
           IF+WLN +NSCPLC+RPLPLE
Sbjct: 186 IFQWLNLHNSCPLCKRPLPLE 198

BLAST of Tan0009292 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12
Identity = 31/100 (31.00%), Postives = 52/100 (52.00%), Query Frame = 0

Query: 142 WINGGAMVEETV--VLEEAPPARRGVAETAMERLRMEKLEENEEDDDFGDCSICLNEMNC 201
           +  G + +E+ +  + ++  P     +E  +  L   K+      +D   C++C+ E   
Sbjct: 174 YFTGASSLEQLIEQLTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEF-I 233

Query: 202 KKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLPLEN 240
              +  ++PC H+YH+ CI  WL  NNSCP+CRR LPL N
Sbjct: 234 VGGDATELPCKHIYHKDCIVPWLRLNNSCPICRRDLPLVN 272

BLAST of Tan0009292 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.2e-11
Identity = 28/63 (44.44%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 178 LEENEEDDDFG-DCSICLNEMNCKKREVIKIPCGHVYHQSCIFKWLNTNNSCPLCRRPLP 237
           L E E DDD G  C++C +EMN   +  +++PC H YH  CI  WL   N+CP+CR  LP
Sbjct: 296 LLEGENDDDGGLVCAVCKDEMNIGNK-AVQLPCNHKYHSECIVPWLKVRNTCPVCRYELP 355

Query: 238 LEN 240
            ++
Sbjct: 356 TDD 357

BLAST of Tan0009292 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.8e-11
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0

Query: 150 EETVVLEEAPP-ARRGVAETAMERL----RMEKLEENEEDDDFGDCSICLNEMNCKKREV 209
           E  V+    P    RG +     RL    R+E  +  EED+    CSIC+ + +    ++
Sbjct: 117 ERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDE---TCSICIEKFSESHEDI 176

Query: 210 IKIP-CGHVYHQSCIFKWLNTNNSCPLCRR 234
           I++P C H++HQ C+F+WL   NSCPLCR+
Sbjct: 177 IRVPDCLHLFHQGCLFEWLGLQNSCPLCRK 203

BLAST of Tan0009292 vs. TAIR 10
Match: AT5G37270.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.8e-11
Identity = 39/122 (31.97%), Postives = 63/122 (51.64%), Query Frame = 0

Query: 119 FVAEVDFIRLITW-----MGITPQPYQGWINGGAMVEETVVLEEAPPARRGVAETAMERL 178
           F+ +++F RL++          PQP+   ++    V   V+L       R + +  +E  
Sbjct: 81  FITDIEFCRLLSERIALDCAHIPQPFS--VSFYVRVTRDVMLPSIAVPSRDMFQRLLEEQ 140

Query: 179 RMEKLEENEEDDDFGDCSICLNEMN-CKKREVIKIP-CGHVYHQSCIFKWLNTNNSCPLC 234
            ME  +  +E++    CSICL + +      +I +P C H++HQSCIF+WL    SCPLC
Sbjct: 141 TMEFTDLGDEEET--TCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLC 198

BLAST of Tan0009292 vs. TAIR 10
Match: AT5G37230.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.0e-10
Identity = 39/122 (31.97%), Postives = 61/122 (50.00%), Query Frame = 0

Query: 119 FVAEVDFIRLITWMGI-----TPQPYQGWINGGAMVEETVVLEEAPPARRGVAETAMERL 178
           F+   +F RL++   +      PQP+   ++    V   V+L       R + +  +E  
Sbjct: 81  FITHTEFCRLLSERIVLDCAHIPQPFS--VSFYVRVTRDVMLPSIVVRSRDMFQRLLEEQ 140

Query: 179 RMEKLEENEEDDDFGDCSICLNEMN-CKKREVIKIP-CGHVYHQSCIFKWLNTNNSCPLC 234
            ME     +E++    CSIC+ + +      +I +P C H++HQSCIFKWL    SCPLC
Sbjct: 141 TMELTNLGDEEET--TCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLC 198

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0CH304.3e-1031.82E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
Q6AXU46.2e-0937.80E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus OX=10116 GN=Rnf181 PE=1 ... [more]
Q8LPN76.2e-0932.95E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
Q7ZW781.1e-0844.83E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2[more]
Q9NVW21.1e-0838.03E3 ubiquitin-protein ligase RLIM OS=Homo sapiens OX=9606 GN=RLIM PE=1 SV=3[more]
Match NameE-valueIdentityDescription
KAG6603237.12.9e-6456.30E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ... [more]
KAG6603243.11.4e-6355.88E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ... [more]
XP_038883574.11.4e-6354.81E3 ubiquitin-protein ligase RNF181-like [Benincasa hispida][more]
XP_016899530.19.7e-6053.97PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo] >KAA0035774.1 ... [more]
XP_004144954.16.3e-5955.08uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
A0A5D3E1S54.7e-6053.97E3 ubiquitin-protein ligase RNF181-like protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S4DUZ44.7e-6053.97E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ... [more]
A0A0A0K6963.0e-5955.08RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 P... [more]
A0A0A0K2W23.0e-5955.08RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 P... [more]
A0A6J1EKL43.5e-5557.71E3 ubiquitin-protein ligase arkadia-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
Match NameE-valueIdentityDescription
AT1G60360.13.6e-1231.00RING/U-box superfamily protein [more]
AT5G08139.15.2e-1144.44RING/U-box superfamily protein [more]
AT5G37200.18.8e-1136.67RING/U-box superfamily protein [more]
AT5G37270.18.8e-1131.97RING/U-box superfamily protein [more]
AT5G37230.12.0e-1031.97RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 190..231
e-value: 2.2E-7
score: 40.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 189..232
e-value: 1.8E-13
score: 50.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 190..232
score: 13.462976
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 153..237
e-value: 1.9E-20
score: 74.3
NoneNo IPR availablePANTHERPTHR45931SI:CH211-59O9.10coord: 67..235
NoneNo IPR availablePANTHERPTHR45931:SF9E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKEcoord: 67..235
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 173..236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0009292.1Tan0009292.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process