Tan0009274 (gene) Snake gourd v1

Overview


Name	Tan0009274
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pectin lyase-like superfamily protein
Location	LG02: 43089149 .. 43090523 (-)
RNA-Seq Expression	Tan0009274
Synteny	Tan0009274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGACACGTTGATGGAGTTACCATATCAGGTGGAATTCTTGATGGTCAAGGAGCTGGTTTATGGGCTTGTAAAAACTCAACCAAAGCTTGTCCGAATGGAGCTTCGGTATGCAAATTAATATGAATTCTGTTTTCTGTTTTTTAATCTCTTTGGTCATCAAGTCTCACTATAATGTTTTTAATTTTGCTTCTTTATTCTCTTGCATATTTGTTATTGTTTGTGCAGGCACTTGAATTCTCCAACTCAAAAAAAAAAATGTTGTTGTTAGTGCATTAACATCACTCAATAGCCAAATGTTCCACATAGTGGTCAATGGTTGCCAAAATCTCAAAATGAAGGGACTTAAAATCTTAGCCTCTAGAAATAGCCCCAACACGGATGGTATTCATGTAGAACTATCATCTAATGTTACCATACTAAATTCTAAGATAGGCACCGGGGATGATTGTATATCCATTGGTCCTGGTACCTCCAATATGTGGATTGAGAATATTGTTTGTAGGCCTGGTCACGGAATAAGGTACGTATGATTATTTTATCATTTTTTCGATATTTGAATATGAAAGAAGAGATTAAATGAAAATTTTTTAAGGGTCTATTTGAAGTGCATAATATAATAACCTGTGTTATAATAGTTTGCAATAACTTTGGACCCCAAATCAACCTAGATTAAATAACTATACATCCCAAAACACAAATTACTTAAATTGACAGACTATTATAACTCATATATTATAACCCACTTAACGCCTCAAATAATCTAAAAGTTTTGGTGTTTGTTTGAATGGTTTTGCAGCATTGGAAGTCTAGGAAAGAACCTTGAAGAGGCTGGAGTGCAAAATATAACTGTGAAAAAAACTTCATTTTCACACACTCAAAATGGGGTAAGAATCAAAACATGGGGCAAGTCAAGCAATGGATTTGCTAGGAACATTCTCTTCCAACATATTGTAATGGACAATGTTCAAAATCCAATTATTATCGATCAAAATTATTGTCCAAACCACAATGATTGTTCGAGCCAGGTATGAATTTTAGATCTTGCACTTTCTAGTTATATGGTATTTCATCACACAATAAAAAAACAACCAAATAAAATAGGTTTGCCACTTTTTTTTTTTAAATTGTTATTGTTCAACATATCGAGCAGGCTTCTGGAGTCAGAATTAGTAATGTGACATATCAAGACATTCATGGAACATCAGTCACCCAAATTGCAGTCAAATTCGATTGCAGTCCAACAAATCCATGTGTTCAAATAAGATTGGAGGACATAAAGCTTACTTATATGAATCAAACAGCCCAAGCGACATGTAGCCATGTAGAAGGAATTGCTGCTGGTCTCGTTGAGCCCACTAGTTGCTTCTAA

mRNA sequence

ATGTTTAGACACGTTGATGGAGTTACCATATCAGGTGGAATTCTTGATGGTCAAGGAGCTGGTTTATGGGCTTGTAAAAACTCAACCAAAGCTTGTCCGAATGGAGCTTCGGGACTTAAAATCTTAGCCTCTAGAAATAGCCCCAACACGGATGGTATTCATGTAGAACTATCATCTAATGTTACCATACTAAATTCTAAGATAGGCACCGGGGATGATTGTATATCCATTGGTCCTGGTACCTCCAATATGTGGATTGAGAATATTGTTTGTAGGCCTGGTCACGGAATAAGCATTGGAAGTCTAGGAAAGAACCTTGAAGAGGCTGGAGTGCAAAATATAACTGTGAAAAAAACTTCATTTTCACACACTCAAAATGGGGTAAGAATCAAAACATGGGGCAAGTCAAGCAATGGATTTGCTAGGAACATTCTCTTCCAACATATTGTAATGGACAATGTTCAAAATCCAATTATTATCGATCAAAATTATTGTCCAAACCACAATGATTGTTCGAGCCAGGCTTCTGGAGTCAGAATTAGTAATGTGACATATCAAGACATTCATGGAACATCAGTCACCCAAATTGCAGTCAAATTCGATTGCAGTCCAACAAATCCATGTGTTCAAATAAGATTGGAGGACATAAAGCTTACTTATATGAATCAAACAGCCCAAGCGACATGTAGCCATGTAGAAGGAATTGCTGCTGGTCTCGTTGAGCCCACTAGTTGCTTCTAA

Coding sequence (CDS)

ATGTTTAGACACGTTGATGGAGTTACCATATCAGGTGGAATTCTTGATGGTCAAGGAGCTGGTTTATGGGCTTGTAAAAACTCAACCAAAGCTTGTCCGAATGGAGCTTCGGGACTTAAAATCTTAGCCTCTAGAAATAGCCCCAACACGGATGGTATTCATGTAGAACTATCATCTAATGTTACCATACTAAATTCTAAGATAGGCACCGGGGATGATTGTATATCCATTGGTCCTGGTACCTCCAATATGTGGATTGAGAATATTGTTTGTAGGCCTGGTCACGGAATAAGCATTGGAAGTCTAGGAAAGAACCTTGAAGAGGCTGGAGTGCAAAATATAACTGTGAAAAAAACTTCATTTTCACACACTCAAAATGGGGTAAGAATCAAAACATGGGGCAAGTCAAGCAATGGATTTGCTAGGAACATTCTCTTCCAACATATTGTAATGGACAATGTTCAAAATCCAATTATTATCGATCAAAATTATTGTCCAAACCACAATGATTGTTCGAGCCAGGCTTCTGGAGTCAGAATTAGTAATGTGACATATCAAGACATTCATGGAACATCAGTCACCCAAATTGCAGTCAAATTCGATTGCAGTCCAACAAATCCATGTGTTCAAATAAGATTGGAGGACATAAAGCTTACTTATATGAATCAAACAGCCCAAGCGACATGTAGCCATGTAGAAGGAATTGCTGCTGGTCTCGTTGAGCCCACTAGTTGCTTCTAA

Protein sequence

MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF

Homology

[Close]

BLAST of Tan0009274 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 1.2e-95
Identity = 168/281 (59.79%), Postives = 206/281 (73.31%), Query Frame = 0


Query: 2   FRHVDGVTISGGILDGQGAGLWACKN-STKACPNGAS----------------------- 61
           F HV+GVTISGGILDGQG  LWACK    ++CP+GA+                       
Sbjct: 112 FHHVNGVTISGGILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMF 171

Query: 62  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 121
                        G+++  S NSPNTDGIHV++SS VTILNSKI TGDDC+SIGPGTSN+
Sbjct: 172 HIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNL 231

Query: 122 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 181
           WIE + C PGHGISIGSLGK  EEAGVQN+TVK  +FS TQNG+RIK+WG+ S GFARNI
Sbjct: 232 WIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNI 291

Query: 182 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 241
           LFQH  M NV+NPI+IDQ+YCP++  C  Q SGV+IS+VTY+DIHGTS T++AVKFDCSP
Sbjct: 292 LFQHATMVNVENPIVIDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSP 351

Query: 242 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
            +PC +I+LED+KLTY NQ A+++CSH +G   G+V+PTSC
Sbjct: 352 KHPCREIKLEDVKLTYKNQAAESSCSHADGTTEGVVQPTSC 392

[Close]

BLAST of Tan0009274 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 9.0e-72
Identity = 144/281 (51.25%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 2   FRHVDGVTISGGILDGQGAGLWACKNS-TKACPNGA------------------------ 61
           F  V  V+I GGILD QG  LW CKN+    CP GA                        
Sbjct: 118 FEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKF 177

Query: 62  ------------SGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 121
                        G+K+ A  NSPNTDGIHVE S +V I NS+IGTGDDCISIGPG++N+
Sbjct: 178 HIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNV 237

Query: 122 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 181
           +I+ I C PGHGISIGSLG+  EE GV N+TV    F  T NGVRIKTWGK SN FARNI
Sbjct: 238 FIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNI 297

Query: 182 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 241
           +FQHI M  V+NPIIIDQ+YC  H  C  Q SGV++SNV Y+DIHGTS T++AV  DCS 
Sbjct: 298 VFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSK 357

Query: 242 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
             PC  I ++D+ L  +++ AQA+C +  G A  +V  T C
Sbjct: 358 EKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPC 397

[Close]

BLAST of Tan0009274 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.7e-52
Identity = 120/283 (42.40%), Postives = 159/283 (56.18%), Query Frame = 0


Query: 2   FRHVDGVTISG-GILDGQGAGLWACKNSTK--ACPNGASGLK------------------ 61
           F  +DG+T+SG G LDGQG   WA  N  K   C + A  L+                  
Sbjct: 91  FYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDITSLNSK 150

Query: 62  ------------------ILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTS 121
                             + A   S NTDGIHV +S  VTI N+KI TGDDCISIGPG+ 
Sbjct: 151 MFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPGSQ 210

Query: 122 NMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFAR 181
           N+ I  + C PGHGISIGSLG+   E  V+ ITVK  +FS T NGVR+KTW  S  G A 
Sbjct: 211 NVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPPGAAT 270

Query: 182 NILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQA-SGVRISNVTYQDIHGTSVTQIAVKFD 241
           ++ FQ + M+NVQNP+I+DQ YCP +  CS QA S +++SN+ + +I GTS  ++AV   
Sbjct: 271 DLTFQDLTMNNVQNPVILDQEYCP-YGQCSRQAPSRIKLSNINFNNIRGTSTGKVAVVIA 330

Query: 242 CSPTNPCVQIRLEDIKLTYMNQ--TAQATCSHVEGIAAGLVEP 243
           CS   PC  +++ +I L+Y      A +TCS+V+   +G   P
Sbjct: 331 CSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSGKQVP 372

[Close]

BLAST of Tan0009274 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 2.2e-49
Identity = 105/223 (47.09%), Postives = 140/223 (62.78%), Query Frame = 0


Query: 25  CKNSTKACPNGASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 84
           CKN T       S + I A   S NTDGIH+  S+ V ++ +KI TGDDC+SIG GT N+
Sbjct: 220 CKNIT------LSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENL 279

Query: 85  WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 144
            +EN+ C PGHGISIGSLG+   E  V+ +TV+K    +T NGVRIKTW  S  G A NI
Sbjct: 280 IVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNI 339

Query: 145 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 204
           LF+ I MDNV  P++IDQ YCP  +  +   S V++S+VT + I GTS T++AVK  CS 
Sbjct: 340 LFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSK 399

Query: 205 TNPCVQIRLEDIKLTYMNQ--TAQATCSHVEGIAAGLVEPTSC 246
             PC  I L DI L +  +   A + CS+++ I +G + P +C
Sbjct: 400 GVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAAC 436

[Close]

BLAST of Tan0009274 vs. ExPASy Swiss-Prot
Match: P35336 (Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.3e-49
Identity = 103/208 (49.52%), Postives = 130/208 (62.50%), Query Frame = 0


Query: 36  ASGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMWIENIVCRPGH 95
           AS L + A  NSPNTDGIHV  + N+ I +  IGTGDDCISI  G+  + + +I C PGH
Sbjct: 247 ASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNGSRKVRVNDITCGPGH 306

Query: 96  GISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNILFQHIVMDNVQ 155
           GISIGSLG    EA V ++ V       T NGVRIKTW +  +G A NI FQ++ M NV+
Sbjct: 307 GISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTW-QGGSGSASNIKFQNVEMHNVE 366

Query: 156 NPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPTNPCVQIRLED 215
           NPIIIDQNYC     C  Q+S V++ NV YQ+I GT  + +A+ FDCS   PC  I LED
Sbjct: 367 NPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCASNVAITFDCSKRFPCQGIVLED 426

Query: 216 IKLTYM-NQTAQATCSHVEGIAAGLVEP 243
           + L       A+A C++VE    G+V P
Sbjct: 427 VDLEIEGGAAAKALCNNVELSETGVVSP 453

[Close]

BLAST of Tan0009274 vs. NCBI nr
Match: XP_022927887.1 (polygalacturonase-like [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 9.5e-119
Identity = 221/283 (78.09%), Postives = 230/283 (81.27%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           MFRHVDGVTISGGILDGQG GLWACKNSTKACPNGA+                       
Sbjct: 111 MFRHVDGVTISGGILDGQGTGLWACKNSTKACPNGATTLEFSNSKNIAITGLTSLNSQMF 170

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLKI+AS +SPNTDGIHVE SSNVTILNS IGTGDDCISIGPGTS+M
Sbjct: 171 HVVVNDCQNLKIKGLKIIASGDSPNTDGIHVEQSSNVTILNSHIGTGDDCISIGPGTSDM 230

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC+PGHGISIGSLGKNLEEAGVQNITVKK  FSHTQNGVRIKTWGK SNGFA NI
Sbjct: 231 WIENIVCKPGHGISIGSLGKNLEEAGVQNITVKKALFSHTQNGVRIKTWGKPSNGFATNI 290

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQ I+MDNV+NPIIIDQNYCPNH DCS+QASGV+ISNVTYQDIHGTS TQIAVKFDCSP
Sbjct: 291 LFQKIIMDNVKNPIIIDQNYCPNHKDCSTQASGVQISNVTYQDIHGTSATQIAVKFDCSP 350

Query: 241 TNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF 247
           TNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Sbjct: 351 TNPCVQIRLEDINLTSRKNQTAQAVCSHVEGIATGLVEPTSCF 393

[Close]

BLAST of Tan0009274 vs. NCBI nr
Match: XP_023531798.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 2.8e-118
Identity = 219/283 (77.39%), Postives = 230/283 (81.27%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           MFRHVDGVTISGGILDGQG GLWACKNSTKACPNGA+                       
Sbjct: 111 MFRHVDGVTISGGILDGQGTGLWACKNSTKACPNGATTLEFSNAKNIAITGLTSLNSQMF 170

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLKI+AS +SPNTDGIHVE SSNVTILNS +GTGDDCISIGPGTS+M
Sbjct: 171 HVVVNDCQNFKIKGLKIIASGDSPNTDGIHVEQSSNVTILNSHVGTGDDCISIGPGTSDM 230

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC+PGHGISIGSLGKNLEEAGV+NITVKK  FSHTQNGVRIKTWGK SNGFA NI
Sbjct: 231 WIENIVCKPGHGISIGSLGKNLEEAGVRNITVKKALFSHTQNGVRIKTWGKPSNGFATNI 290

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQ I+MDNV+NPIIIDQNYCPNH DCS+QASGV+ISNVTYQDIHGTS TQIAVKFDCSP
Sbjct: 291 LFQKIIMDNVKNPIIIDQNYCPNHKDCSTQASGVKISNVTYQDIHGTSATQIAVKFDCSP 350

Query: 241 TNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF 247
           TNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Sbjct: 351 TNPCVQIRLEDINLTSRKNQTAQAVCSHVEGIATGLVEPTSCF 393

[Close]

BLAST of Tan0009274 vs. NCBI nr
Match: XP_022989658.1 (polygalacturonase-like [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.8e-115
Identity = 216/283 (76.33%), Postives = 226/283 (79.86%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           MFRHV+GVTI+GGILDGQG GLW CKNSTK CPNGA+                       
Sbjct: 111 MFRHVNGVTIAGGILDGQGTGLWDCKNSTKDCPNGATTLEFSNSKNIAITGLTSLNSQMF 170

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLKI+AS +SPNTDGIHVE SSNVTILNS I TGDDCISIGPGT NM
Sbjct: 171 HVVVNDCQNLKIKGLKIIASGDSPNTDGIHVEQSSNVTILNSHISTGDDCISIGPGTFNM 230

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC+PGHGISIGSLGKNLEEAGV+NITVKK  FSHTQNGVRIKTWG+ SNGFA NI
Sbjct: 231 WIENIVCKPGHGISIGSLGKNLEEAGVRNITVKKALFSHTQNGVRIKTWGRPSNGFATNI 290

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQ IVMDNV+NPIIIDQNYCPNH DCSSQASGV+ISNVTYQDIHGTS TQIAVKFDCSP
Sbjct: 291 LFQKIVMDNVKNPIIIDQNYCPNHKDCSSQASGVQISNVTYQDIHGTSATQIAVKFDCSP 350

Query: 241 TNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF 247
           TNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Sbjct: 351 TNPCVQIRLEDINLTSRKNQTAQAVCSHVEGIATGLVEPTSCF 393

[Close]

BLAST of Tan0009274 vs. NCBI nr
Match: XP_038888714.1 (polygalacturonase-like [Benincasa hispida])

HSP 1 Score: 402.1 bits (1032), Expect = 3.4e-108
Identity = 197/284 (69.37%), Postives = 225/284 (79.23%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKA--CPNGAS--------------------- 60
           +FRH+DGVTISGG LDG+GA LWACKNS+ +  CP GA+                     
Sbjct: 95  LFRHIDGVTISGGNLDGKGAALWACKNSSTSTTCPTGATTLEFSNSKNVVVSALTSLNSQ 154

Query: 61  ---------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTS 120
                          GLK+LAS +SPNTDGIHV+LSS+VTILNSKIGTGDDCISIGPGTS
Sbjct: 155 MFHIVINGCQNVMMKGLKVLASGHSPNTDGIHVQLSSDVTILNSKIGTGDDCISIGPGTS 214

Query: 121 NMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFAR 180
           N+WIENIVC PGHGISIGSL K+L+E GVQNITVK   FS TQNGVRIK WGK SNGFAR
Sbjct: 215 NLWIENIVCGPGHGISIGSLAKDLQEPGVQNITVKNVVFSRTQNGVRIKAWGKPSNGFAR 274

Query: 181 NILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDC 240
           NILFQHIVMDNVQNPI+IDQNYCP+H  C  +ASGV+I++VTYQDIHGTS T+IA+KFDC
Sbjct: 275 NILFQHIVMDNVQNPIVIDQNYCPSHKGCPGKASGVKINDVTYQDIHGTSATEIAIKFDC 334

Query: 241 SPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF 247
           SPTNPCV+I+LED++LTYMNQTAQATC++V GI AGLV+PTSCF
Sbjct: 335 SPTNPCVRIKLEDVRLTYMNQTAQATCNNVGGIVAGLVQPTSCF 378

[Close]

BLAST of Tan0009274 vs. NCBI nr
Match: XP_023530186.1 (polygalacturonase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.7 bits (1023), Expect = 3.7e-107
Identity = 194/281 (69.04%), Postives = 219/281 (77.94%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           +FR VDGVTISGG+ DG+G+GLWACKNSTK CP+GA+                       
Sbjct: 110 LFRRVDGVTISGGVFDGKGSGLWACKNSTKTCPSGATTIEISNSKNVVLSALTSLNSQMF 169

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLK+LAS NSPNTDGIHV+LSS+VTILNSKIGTGDDCISIGPGTSN+
Sbjct: 170 HIVVNGCQNIKMKGLKVLASGNSPNTDGIHVQLSSDVTILNSKIGTGDDCISIGPGTSNL 229

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC PGHGISIGSL K+LEEAGVQN+TVKK  FS TQNGVRIK WG+ SNGF +NI
Sbjct: 230 WIENIVCGPGHGISIGSLAKDLEEAGVQNVTVKKALFSRTQNGVRIKAWGRPSNGFVKNI 289

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQHIVMDNVQNPI+IDQNYCP+H  C  QASGV+IS+VTYQDIHGTS TQIAVKFDCSP
Sbjct: 290 LFQHIVMDNVQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQDIHGTSATQIAVKFDCSP 349

Query: 241 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
           TNPC  I++ED+KL+Y +Q A ATCSHV G A G VEP++C
Sbjct: 350 TNPCSGIKMEDVKLSYKDQIAGATCSHVGGTATGSVEPSNC 390

[Close]

BLAST of Tan0009274 vs. ExPASy TrEMBL
Match: A0A6J1EIF8 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434651 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.6e-119
Identity = 221/283 (78.09%), Postives = 230/283 (81.27%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           MFRHVDGVTISGGILDGQG GLWACKNSTKACPNGA+                       
Sbjct: 111 MFRHVDGVTISGGILDGQGTGLWACKNSTKACPNGATTLEFSNSKNIAITGLTSLNSQMF 170

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLKI+AS +SPNTDGIHVE SSNVTILNS IGTGDDCISIGPGTS+M
Sbjct: 171 HVVVNDCQNLKIKGLKIIASGDSPNTDGIHVEQSSNVTILNSHIGTGDDCISIGPGTSDM 230

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC+PGHGISIGSLGKNLEEAGVQNITVKK  FSHTQNGVRIKTWGK SNGFA NI
Sbjct: 231 WIENIVCKPGHGISIGSLGKNLEEAGVQNITVKKALFSHTQNGVRIKTWGKPSNGFATNI 290

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQ I+MDNV+NPIIIDQNYCPNH DCS+QASGV+ISNVTYQDIHGTS TQIAVKFDCSP
Sbjct: 291 LFQKIIMDNVKNPIIIDQNYCPNHKDCSTQASGVQISNVTYQDIHGTSATQIAVKFDCSP 350

Query: 241 TNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF 247
           TNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Sbjct: 351 TNPCVQIRLEDINLTSRKNQTAQAVCSHVEGIATGLVEPTSCF 393

[Close]

BLAST of Tan0009274 vs. ExPASy TrEMBL
Match: A0A6J1JQZ3 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486676 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 216/283 (76.33%), Postives = 226/283 (79.86%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           MFRHV+GVTI+GGILDGQG GLW CKNSTK CPNGA+                       
Sbjct: 111 MFRHVNGVTIAGGILDGQGTGLWDCKNSTKDCPNGATTLEFSNSKNIAITGLTSLNSQMF 170

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLKI+AS +SPNTDGIHVE SSNVTILNS I TGDDCISIGPGT NM
Sbjct: 171 HVVVNDCQNLKIKGLKIIASGDSPNTDGIHVEQSSNVTILNSHISTGDDCISIGPGTFNM 230

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC+PGHGISIGSLGKNLEEAGV+NITVKK  FSHTQNGVRIKTWG+ SNGFA NI
Sbjct: 231 WIENIVCKPGHGISIGSLGKNLEEAGVRNITVKKALFSHTQNGVRIKTWGRPSNGFATNI 290

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQ IVMDNV+NPIIIDQNYCPNH DCSSQASGV+ISNVTYQDIHGTS TQIAVKFDCSP
Sbjct: 291 LFQKIVMDNVKNPIIIDQNYCPNHKDCSSQASGVQISNVTYQDIHGTSATQIAVKFDCSP 350

Query: 241 TNPCVQIRLEDIKLT-YMNQTAQATCSHVEGIAAGLVEPTSCF 247
           TNPCVQIRLEDI LT   NQTAQA CSHVEGIA GLVEPTSCF
Sbjct: 351 TNPCVQIRLEDINLTSRKNQTAQAVCSHVEGIATGLVEPTSCF 393

[Close]

BLAST of Tan0009274 vs. ExPASy TrEMBL
Match: A0A6J1EHY1 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434520 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 195/281 (69.40%), Postives = 220/281 (78.29%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           +FR VDGVTISGGI DG+G+GLWACKNSTK CP+GA+                       
Sbjct: 110 LFRGVDGVTISGGIFDGKGSGLWACKNSTKTCPSGATTIEISDSKNVVLSALTSFNSQMF 169

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLK+LAS NSPNTDGIHV+LSS+VTILNSKIGTGDDCISIGPGTSN+
Sbjct: 170 HIVVNGCQNIKMKGLKVLASGNSPNTDGIHVQLSSDVTILNSKIGTGDDCISIGPGTSNL 229

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC PGHGISIGSL K+LEEAGVQN+TVKK  FS TQNGVRIK WG+ SNGF +NI
Sbjct: 230 WIENIVCGPGHGISIGSLAKDLEEAGVQNVTVKKALFSRTQNGVRIKAWGRPSNGFVKNI 289

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQHIVMDNVQNPI+IDQNYCP+H  C  QASGV+IS+VTYQ+IHGTS TQIAVKFDCSP
Sbjct: 290 LFQHIVMDNVQNPIVIDQNYCPSHKGCPGQASGVKISDVTYQNIHGTSATQIAVKFDCSP 349

Query: 241 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
           TNPC +I++ED+KL+Y +Q A ATCSHV G A G VEP+SC
Sbjct: 350 TNPCSRIKMEDVKLSYKDQIAGATCSHVGGTATGRVEPSSC 390

[Close]

BLAST of Tan0009274 vs. ExPASy TrEMBL
Match: A0A6J1EJA0 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434653 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.5e-106
Identity = 193/281 (68.68%), Postives = 218/281 (77.58%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           +FR VDGVTISGGI DG+G+GLWACKNSTK CP+GA+                       
Sbjct: 110 LFRGVDGVTISGGIFDGKGSGLWACKNSTKTCPSGATTIEISNSKNVVLSALTSLNSQMF 169

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        GLK+LAS NSPNTDGIHV+LSS+V ILNSKIGTGDDCISIGPGTSN+
Sbjct: 170 HIVVNGCQNIKMKGLKVLASGNSPNTDGIHVQLSSDVIILNSKIGTGDDCISIGPGTSNL 229

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIENIVC PGHGISIGSL K+L+EAGVQN+TVKK  FS TQNGVRIK WG+ SNGF +NI
Sbjct: 230 WIENIVCGPGHGISIGSLAKDLQEAGVQNVTVKKALFSRTQNGVRIKAWGRPSNGFVKNI 289

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQHIVMDNVQNPI+IDQNYCP+H DC  +ASGV+IS+VTYQDIHGTS TQIAVKFDCSP
Sbjct: 290 LFQHIVMDNVQNPIVIDQNYCPSHKDCPGKASGVKISDVTYQDIHGTSATQIAVKFDCSP 349

Query: 241 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
           TNPC  I++ED+KL+Y +Q A ATCSH  G A G VEP+SC
Sbjct: 350 TNPCSGIKMEDVKLSYKDQIAGATCSHAGGTATGSVEPSSC 390

[Close]

BLAST of Tan0009274 vs. ExPASy TrEMBL
Match: A0A5A7VKX0 (Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00120 PE=3 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 4.4e-106
Identity = 195/284 (68.66%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTK--ACPNGAS--------------------- 60
           +FRHVDGVT+SGG LDG+GAGLWACKNS+    CP GA+                     
Sbjct: 117 IFRHVDGVTVSGGNLDGKGAGLWACKNSSSRTTCPTGATTLQFSNSKNVVISALTSLNSQ 176

Query: 61  ---------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTS 120
                          GLK+LAS NSPNTDGIHV++SSNV +LNSKIGTGDDCISIGPGTS
Sbjct: 177 MFHIVINGCQNVTMKGLKVLASGNSPNTDGIHVQMSSNVAVLNSKIGTGDDCISIGPGTS 236

Query: 121 NMWIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFAR 180
           N+ IENIVC PGHGISIGSL K+++E GVQN+TVK   FS TQNGVRIK WGK SNGFAR
Sbjct: 237 NLHIENIVCGPGHGISIGSLAKDVQEDGVQNVTVKNVVFSRTQNGVRIKAWGKPSNGFAR 296

Query: 181 NILFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDC 240
           NILFQHIVMDNVQNPIIIDQNYCP+H  C  +ASGV+I++VTYQDIHGTS T+IAVKFDC
Sbjct: 297 NILFQHIVMDNVQNPIIIDQNYCPSHKGCPEKASGVKINDVTYQDIHGTSATKIAVKFDC 356

Query: 241 SPTNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSCF 247
           SPTNPC  I+LE+++LTYMNQTAQATC++V GIAAGLV+PTSCF
Sbjct: 357 SPTNPCGGIKLENVRLTYMNQTAQATCNNVGGIAAGLVQPTSCF 400

[Close]

BLAST of Tan0009274 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 325.1 bits (832), Expect = 4.9e-89
Identity = 153/281 (54.45%), Postives = 192/281 (68.33%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS----------------------- 60
           +F+H+DG+++ GG+LD QGA LW+CK S K CP+GA+                       
Sbjct: 107 LFQHLDGISVYGGVLDAQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMF 166

Query: 61  -------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                        G+K+ A  NSPNTDGIHV+ SS V+ILNSKI TGDDC+SIGPGT+ +
Sbjct: 167 HVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGL 226

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIEN+ C PGHGISIGSLGK   E GVQNITVK  +F+ T+NGVRIK+W + SNGFA+NI
Sbjct: 227 WIENVACGPGHGISIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNI 286

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
            FQH VM+NVQNPI+IDQNYCP + +C +Q SG++IS+V + DIHGTS T++ VK DCS 
Sbjct: 287 RFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSS 346

Query: 241 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
             PC  IR++D+KLTY N+ A   CSH  G  AG   P SC
Sbjct: 347 KKPCTGIRIQDVKLTYRNKPATTDCSHAGGSEAGFQRPNSC 387

[Close]

BLAST of Tan0009274 vs. TAIR 10
Match: AT2G43870.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 7.1e-88
Identity = 152/277 (54.87%), Postives = 194/277 (70.04%), Query Frame = 0


Query: 2   FRHVDGVTISGGILDGQGAGLWACKNSTKACPNGAS------------------------ 61
           F+H+DG+T+ GG+LD +GA LW CK S K CP+GA+                        
Sbjct: 106 FQHLDGITVYGGVLDARGASLWDCKKSGKNCPSGATTIGFQSSSNVVVSGLTSLNSQMFH 165

Query: 62  ------------GLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNMW 121
                       G+K+LA+ NSPNTDGIHV+ SS+V+I N+KI TGDDC+SIGPGT+ +W
Sbjct: 166 VVINGCNNVKLQGVKVLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLW 225

Query: 122 IENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNIL 181
           IEN+ C PGHGISIGSLGK+  E+GVQN+TVK  +F+ T NGVRIK+W + S+GFA+NI 
Sbjct: 226 IENVACGPGHGISIGSLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIR 285

Query: 182 FQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSPT 241
           FQH VM+NV+NPIIIDQNYCP+H DC  Q SG++IS+V + DIHGTS T++ VK DCS  
Sbjct: 286 FQHCVMNNVENPIIIDQNYCPDH-DCPRQVSGIKISDVLFVDIHGTSATEVGVKLDCSSK 345

Query: 242 NPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEP 243
            PC  IRLED+KLTY N+ A + C+H  GI AG  +P
Sbjct: 346 KPCTGIRLEDVKLTYQNKPAASACTHAGGIEAGFFQP 381

[Close]

BLAST of Tan0009274 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 278.9 bits (712), Expect = 4.0e-75
Identity = 138/281 (49.11%), Postives = 184/281 (65.48%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGA-------------SGL-------- 60
           +F  V+ ++I GG LD +GA  WAC+ S K+CP GA             SGL        
Sbjct: 111 LFVKVNRISIIGGTLDARGASFWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTT 170

Query: 61  ---------------KILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                          K++A   SPNTDG+HV+ S+ VT+ +    TGDDCISIGPGT N+
Sbjct: 171 HLVINSCNNVIVRKVKLVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNL 230

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           ++  + C PGHGISIGSLG++  EAGV+NIT+  + FS + NGVRIKTW + S GF RN+
Sbjct: 231 YMSKLNCGPGHGISIGSLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNV 290

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           LFQ+++M NVQNPII+DQNYCP++  C  Q SGV+IS V Y++I GTS TQ A+ FDCS 
Sbjct: 291 LFQNLIMKNVQNPIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSR 350

Query: 241 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
           +NPC  IRL DIKLT+  ++A +TC +++G+ AG+V P  C
Sbjct: 351 SNPCQAIRLHDIKLTFNGRSATSTCKNIKGVKAGVVMPQGC 391

[Close]

BLAST of Tan0009274 vs. TAIR 10
Match: AT2G43860.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 6.4e-73
Identity = 144/281 (51.25%), Postives = 174/281 (61.92%), Query Frame = 0


Query: 2   FRHVDGVTISGGILDGQGAGLWACKNS-TKACPNGA------------------------ 61
           F  V  V+I GGILD QG  LW CKN+    CP GA                        
Sbjct: 118 FEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKSLVFSGSNNIKISGLTSINSQKF 177

Query: 62  ------------SGLKILASRNSPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 121
                        G+K+ A  NSPNTDGIHVE S +V I NS+IGTGDDCISIGPG++N+
Sbjct: 178 HIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVHITNSRIGTGDDCISIGPGSTNV 237

Query: 122 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 181
           +I+ I C PGHGISIGSLG+  EE GV N+TV    F  T NGVRIKTWGK SN FARNI
Sbjct: 238 FIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNSFARNI 297

Query: 182 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 241
           +FQHI M  V+NPIIIDQ+YC  H  C  Q SGV++SNV Y+DIHGTS T++AV  DCS 
Sbjct: 298 VFQHINMKMVKNPIIIDQHYC-LHKPCPKQESGVKVSNVRYEDIHGTSNTEVAVLLDCSK 357

Query: 242 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
             PC  I ++D+ L  +++ AQA+C +  G A  +V  T C
Sbjct: 358 EKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPFTPC 397

[Close]

BLAST of Tan0009274 vs. TAIR 10
Match: AT2G43880.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 9.3e-72
Identity = 131/281 (46.62%), Postives = 177/281 (62.99%), Query Frame = 0


Query: 1   MFRHVDGVTISGGILDGQGAGLWACKNSTKACPNGA-------------SGLKILASRN- 60
           +F  V+ +++ GG +D +GAG W+C+     CP GA             SGL    S+N 
Sbjct: 113 LFAKVNRISVYGGTIDARGAGYWSCRKKGSHCPQGARSISFSWCNNVLLSGLSSFNSQNM 172

Query: 61  ----------------------SPNTDGIHVELSSNVTILNSKIGTGDDCISIGPGTSNM 120
                                 SPNTDGIHV+ SS VTI    I TGDDCI++  G+ N+
Sbjct: 173 HVTVHHSSNVRIENVRIRAPSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNI 232

Query: 121 WIENIVCRPGHGISIGSLGKNLEEAGVQNITVKKTSFSHTQNGVRIKTWGKSSNGFARNI 180
           WIE + C PGHGISIGSLG    E GVQN+TV  + F+ TQNGVRIKTW + S GF  N+
Sbjct: 233 WIERVNCGPGHGISIGSLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNV 292

Query: 181 LFQHIVMDNVQNPIIIDQNYCPNHNDCSSQASGVRISNVTYQDIHGTSVTQIAVKFDCSP 240
           +F++++M+NV+NP+IIDQNYCPN   C  Q+SGV+IS VT+ +I GTS T IA+K DCS 
Sbjct: 293 VFRNLIMNNVENPVIIDQNYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSG 352

Query: 241 TNPCVQIRLEDIKLTYMNQTAQATCSHVEGIAAGLVEPTSC 246
           +N C  +RL+DIKLTYM +++ + C +  G A+G++ P +C
Sbjct: 353 SNHCTGLRLQDIKLTYMRRSSASYCRNAHGRASGVMVPRNC 393

The following BLAST results are available for this feature:

BLAST of Tan0009274 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	1.2e-95	59.79	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	9.0e-72	51.25	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q6H9K0	4.7e-52	42.40	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P49063	2.2e-49	47.09	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]
P35336	6.3e-49	49.52	Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1	[more]

BLAST of Tan0009274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927887.1	9.5e-119	78.09	polygalacturonase-like [Cucurbita moschata]	[more]
XP_023531798.1	2.8e-118	77.39	polygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989658.1	2.8e-115	76.33	polygalacturonase-like [Cucurbita maxima]	[more]
XP_038888714.1	3.4e-108	69.37	polygalacturonase-like [Benincasa hispida]	[more]
XP_023530186.1	3.7e-107	69.04	polygalacturonase-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0009274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIF8	4.6e-119	78.09	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434651 PE=3 SV=1	[more]
A0A6J1JQZ3	1.4e-115	76.33	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486676 PE=3 SV=1	[more]
A0A6J1EHY1	1.8e-107	69.40	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434520 PE=3 SV=1	[more]
A0A6J1EJA0	1.5e-106	68.68	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434653 PE=3 SV=1	[more]
A0A5A7VKX0	4.4e-106	68.66	Polygalacturonase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00...	[more]

BLAST of Tan0009274 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59850.1	4.9e-89	54.45	Pectin lyase-like superfamily protein	[more]
AT2G43870.1	7.1e-88	54.87	Pectin lyase-like superfamily protein	[more]
AT2G43890.1	4.0e-75	49.11	Pectin lyase-like superfamily protein	[more]
AT2G43860.1	6.4e-73	51.25	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	9.3e-72	46.62	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 81..101 e-value: 3300.0 score: 3.6 coord: 58..79 e-value: 540.0 score: 9.1 coord: 5..26 e-value: 3300.0 score: 3.5 coord: 111..132 e-value: 95.0 score: 11.8 coord: 141..182 e-value: 3700.0 score: 3.1
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 34..245 e-value: 4.7E-73 score: 248.5
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 37..233 e-value: 4.1E-62 score: 210.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 88..101
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 38..245
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 38..245
None	No IPR available	PANTHER	PTHR31375:SF219	PUTATIVE-RELATED	coord: 1..46
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..46
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 2..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009274.1	Tan0009274.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004650	polygalacturonase activity