Tan0009093 (gene) Snake gourd v1

Overview


Name	Tan0009093
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG10: 39824441 .. 39826168 (-)
RNA-Seq Expression	Tan0009093
Synteny	Tan0009093

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGCTCTTTTATTCAATTACTCGCCTCCGACAAACTTAACGGCGATAACTTTGGAACTTGGAAATCAAACTTGAATACAATTCTTGTAATTGATGATCTAAGGTTCGTCTTGACGGAGGAATGTCCTTCCCCTCCCAGCTCGTCTGCAACCCGAACAGTTCGGGATGCATTTGACAAATGGACTAGAGCTAATGATAAAGCCCGGGTCTACATCTTAGCCAGCATATCTGATGTGTTGTCTAAAGAAACATGAGGGCATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTCCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGGAGGAACATCGTTAGGAGCATGTCCTTAATATGATGGTCCACTTCAACGTGGGAGAGGTAAACGGGTCATCATTGATGAGAACACCAAAGTTAGCTTCATAATGGAATCTCTTCCGAAGAGTTTCCTGCAGTTCCGCACCAACTCGGTAATGAACAAGATAGAGTATAACCTGACTACTCTACTTAACGAGCTCCAGACATTTGAGTCCCTGATGAAATCAAAGGGAAAAGAGAAGGAAGCAAACGTTGTTACTTCAAGGAAGTTCCTGAGAGGATCATCCTCAGGGACTAAGTCTGGTCCTTCTTTTTCTAAAAATAAGGGTATTGTAAGAAGAAGAAGGAAGGATAAAGGAAGGAAAAAGCTCCCATTCGCAAGGGTAAAGCCACAGGAAAATGTTTCTATTGTGGCGAAGATGGGCACTGGAAGAGGAACTGCCCAAAGTACCTTGCAGAAAAGAAAGCTGAGAAAGAAAAACAAGGTAAATATGATTTACTCGTTGTTGAAACATGTTTAGTGGAACATGATGATTCCGCCTGGATACTAGATTCAGGAGCCACTAACCATGTGTGTTCTTCTTTACAGGAAACTAGTTCCTGGAGGCAGCTTGCTGATAGTGAGATAACTCTCAGGGTTGGAACAGGAGAGGTTGTCTCAGTTAGAGCAGTGGGAGCGATAAAGTTGTTATTTAGAGATAGATTCGTTTTATTAGAAAATGTACTTTTGGTTCCTGGAATCAAAAGAAATCTTGTATCTATCTCTTGATTACTTGAACATATGTATAAAGTGTCTTTTGATTATAATGAAGCGTTCATTTGCAAGAGAGGTGTACGAATATGTTCTGCTAAACTTGAAAACAACTTATATGTGTTAAGACCAACAGAGATAAAAGCTATTTTGAACACTGAGATGTTTAAAAAAGCTGATACTCAAAATAAAAGGCAGAAGTTTTCTCCAAGTACCTATCTTTGGCACCTGAGACTAGGTCACATTAATCTCAATAGGATTGAAAGATTGGTTAAGAGTGGTCTCCTAAGTCAGTTAGAGGACAACTCCTTACCACCATGTGAGTCTTGTCTTGAGGGAAAAATGACTAAACGACCTTTTTCTGAAAAAGGATATAGAGCCAAAGAACCCTTGGAACTCATACATTCGGATCTCTGTGGTCCAATGAATGTCAAGGCACGAGGAGGGTATGAATATTTCATCAGTTTCATTGATGATTATTCAAGGTATGGCTATCTTTACCTAATGCATCATAAGTCCGAAACCCTTGAAAAGTTCAAGGAATATAAGGCAGAGGTTGAGAATTCGTTAGGTAAAACGATTAAAACACTTCGATCAGATCGAGGTGGATAG

mRNA sequence

ATGTCGAGCTCTTTTATTCAATTACTCGCCTCCGACAAACTTAACGGCGATAACTTTGGAACTTGGAAATCAAACTTGAATACAATTCTTGTAATTGATGATCTAAGGTTCGTCTTGACGGAGGAATGTCCTTCCCCTCCCAGCTCGTCTGCAACCCGAACAGTTCGGGATGCATTTGACAAATGGACTAGAGCTAATGATAAAGCCCGGGTCTACATCTTAGCCAGCATATCTGATGTGTTAGCCAAAGAACCCTTGGAACTCATACATTCGGATCTCTGTGGTCCAATGAATGTCAAGGCACGAGGAGGGTATGAATATTTCATCAGTTTCATTGATGATTATTCAAGGTATGGCTATCTTTACCTAATGCATCATAAGTCCGAAACCCTTGAAAAGTTCAAGGAATATAAGGCAGAGGTTGAGAATTCGTTAGGTAAAACGATTAAAACACTTCGATCAGATCGAGGTGGATAG

Coding sequence (CDS)

ATGTCGAGCTCTTTTATTCAATTACTCGCCTCCGACAAACTTAACGGCGATAACTTTGGAACTTGGAAATCAAACTTGAATACAATTCTTGTAATTGATGATCTAAGGTTCGTCTTGACGGAGGAATGTCCTTCCCCTCCCAGCTCGTCTGCAACCCGAACAGTTCGGGATGCATTTGACAAATGGACTAGAGCTAATGATAAAGCCCGGGTCTACATCTTAGCCAGCATATCTGATGTGTTAGCCAAAGAACCCTTGGAACTCATACATTCGGATCTCTGTGGTCCAATGAATGTCAAGGCACGAGGAGGGTATGAATATTTCATCAGTTTCATTGATGATTATTCAAGGTATGGCTATCTTTACCTAATGCATCATAAGTCCGAAACCCTTGAAAAGTTCAAGGAATATAAGGCAGAGGTTGAGAATTCGTTAGGTAAAACGATTAAAACACTTCGATCAGATCGAGGTGGATAG

Protein sequence

MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFDKWTRANDKARVYILASISDVLAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSETLEKFKEYKAEVENSLGKTIKTLRSDRGG

Homology

[Close]

BLAST of Tan0009093 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.1e-13
Identity = 32/73 (43.84%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 86  LELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSETLEKFKEYKAEVENSL 145
           L+L++SD+CGPM +++ GG +YF++FIDD SR  ++Y++  K +  + F+++ A VE   
Sbjct: 481 LDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERET 540

Query: 146 GKTIKTLRSDRGG 159
           G+ +K LRSD GG
Sbjct: 541 GRKLKRLRSDNGG 553

[Close]

BLAST of Tan0009093 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.5e-07
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 76  SISDVLAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSETLEKFK 135
           S S + + +PLE I+SD+     + +   Y Y++ F+D ++RY +LY +  KS+  + F 
Sbjct: 493 SNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFI 552

Query: 136 EYKAEVENSLGKTIKTLRSDRGG 159
            +K+ VEN     I TL SD GG
Sbjct: 553 IFKSLVENRFQTRIGTLYSDNGG 574

[Close]

BLAST of Tan0009093 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 53.1 bits (126), Expect = 3.2e-06
Identity = 24/75 (32.00%), Postives = 40/75 (53.33%), Query Frame = 0


Query: 83  KEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSETLEKFKEYKAEVE 142
           K PL ++HSD+CGP+         YF+ F+D ++ Y   YL+ +KS+    F+++ A+ E
Sbjct: 478 KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537

Query: 143 NSLGKTIKTLRSDRG 158
                 +  L  D G
Sbjct: 538 AHFNLKVVYLYIDNG 552

[Close]

BLAST of Tan0009093 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-06
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 76  SISDVLAKEPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSETLEKFK 135
           S S + +  PLE I+SD+     + +   Y Y++ F+D ++RY +LY +  KS+  E F 
Sbjct: 514 SQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFI 573

Query: 136 EYKAEVENSLGKTIKTLRSDRGG 159
            +K  +EN     I T  SD GG
Sbjct: 574 TFKNLLENRFQTRIGTFYSDNGG 595

[Close]

BLAST of Tan0009093 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.0e-05
Identity = 23/76 (30.26%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 84  EPLELIHSDLCGPMNVKARGGYEYFISFIDDYSRYGYLYLMHHKSE--TLEKFKEYKAEV 143
           EP + +H+D+ GP++   +    YFISF D+ +R+ ++Y +H + E   L  F    A +
Sbjct: 659 EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFI 718

Query: 144 ENSLGKTIKTLRSDRG 158
           +N     +  ++ DRG
Sbjct: 719 KNQFNARVLVIQMDRG 734

[Close]

BLAST of Tan0009093 vs. NCBI nr
Match: KAA0054515.1 (gag/pol protein [Cucumis melo var. makuwa] >TYJ98280.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-49
Identity = 121/259 (46.72%), Postives = 136/259 (52.51%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           MSSS I LL  D+L G+N+ TWKS LN ILVI DLRFVL EECP  P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIPDLRFVLMEECPHFPTKYASQSVRDAYD 60

Query: 61  KWTRANDKARVYILASISDVL--------------------------------------- 120
           +WT+ANDKAR++ILAS+SD+L                                       
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMITARATNHVCSSLQETSSFKQLEESEMTLKVE 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 TGVVILARAVGDAKLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLKGKMTKRPFTGKG 180

[Close]

BLAST of Tan0009093 vs. NCBI nr
Match: KAA0059677.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK26116.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 6.2e-47
Identity = 117/271 (43.17%), Postives = 137/271 (50.55%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           M+SS +QLLA +KLNGDN+  WKSNLNTILV+DDLRFVLTEECP  P+S+A +T   A+D
Sbjct: 1   MNSSIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQTPASNANQTSPKAYD 60

Query: 61  KWTRANDKARVYILASISDVLAKE------------------------------------ 120
           +W +AN+KA VYILAS+SDVLAK+                                    
Sbjct: 61  RWIKANEKACVYILASMSDVLAKKYESLTTAKEIMDSLKGMFGQPKWSLRHETIKYIYIK 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 RMKEGTSVREHVLDMMIHFNIAEVNGGAIDEAMRIGRLVKNGLLSQFEDNSLLPCDSCLE 180

[Close]

BLAST of Tan0009093 vs. NCBI nr
Match: TYK29762.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-45
Identity = 118/278 (42.45%), Postives = 139/278 (50.00%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           M+SS +QLLAS+KLNGDN+  WKSNLNTIL + DLRFVLT +CP  P+S+A RT R A+D
Sbjct: 1   MNSSIVQLLASEKLNGDNYAAWKSNLNTILDVGDLRFVLTGKCPQTPASNANRTSRKAYD 60

Query: 61  KWTRANDKARVYILASISDVLAKE------------------------------------ 120
           +W +AN+KARVYILAS+SDVLAK+                                    
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHKSLATAKEIMDSLKGMFGQPELFLGHDVIKYIHTK 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 QMKEGTSIREHVLDMMMHFNIAEVNGSVIDEGNQVSFILESLPKSFIPFQTNVSLNKIEF 180

[Close]

BLAST of Tan0009093 vs. NCBI nr
Match: KAA0059678.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 9.9e-45
Identity = 118/282 (41.84%), Postives = 134/282 (47.52%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           MSSS I LL  D+L  +N+ TWKS LN ILVI DLRFVL EECP  P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKIDQLTDENYATWKSKLNMILVIADLRFVLMEECPPFPTKYASQSVRDAYD 60

Query: 61  KWTRANDKARVYILASISDVL--------------------------------------- 120
           +WT+ANDK+R++IL S+SD+L                                       
Sbjct: 61  RWTKANDKSRLHILTSMSDILSKKHEIMIKQEANVAHSRRFAPSSSGSEKIQKRKEGKGK 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 GPTITVEGKGKTKVVIKGKCFHCNVDEHWKKNCPKYLVKKKEKEGATNHVCSSLQETSSF 180

[Close]

BLAST of Tan0009093 vs. NCBI nr
Match: TYJ98650.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.4 bits (459), Expect = 6.0e-42
Identity = 110/252 (43.65%), Postives = 124/252 (49.21%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           MSS  I LL  D+L G+N+ TWKS LN ILVI DLRFVL EEC   P   A+++VRDA+D
Sbjct: 1   MSSLIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECHPFPIKYASQSVRDAYD 60

Query: 61  KWTRANDKARVYILASISDVL--------------------------------------- 120
           +WT+ANDKAR++ILAS+SD+L                                       
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMVTTRQIMDSLREMFGQPSIQIKQEANVAYSRR 120

Query: 121 ------------------------------------------------------------ 146
                                                                       
Sbjct: 121 FSPSSSGSEKIQKRKGGKGKGPTIAAEGNGKAKVTIKGNISTEMLIDIGKETALSKMTKR 180

[Close]

BLAST of Tan0009093 vs. ExPASy TrEMBL
Match: A0A5A7ULG4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G00250 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 121/259 (46.72%), Postives = 136/259 (52.51%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           MSSS I LL  D+L G+N+ TWKS LN ILVI DLRFVL EECP  P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIPDLRFVLMEECPHFPTKYASQSVRDAYD 60

Query: 61  KWTRANDKARVYILASISDVL--------------------------------------- 120
           +WT+ANDKAR++ILAS+SD+L                                       
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMITARATNHVCSSLQETSSFKQLEESEMTLKVE 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 TGVVILARAVGDAKLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLKGKMTKRPFTGKG 180

[Close]

BLAST of Tan0009093 vs. ExPASy TrEMBL
Match: A0A5A7UYF5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00290 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.0e-47
Identity = 117/271 (43.17%), Postives = 137/271 (50.55%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           M+SS +QLLA +KLNGDN+  WKSNLNTILV+DDLRFVLTEECP  P+S+A +T   A+D
Sbjct: 1   MNSSIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQTPASNANQTSPKAYD 60

Query: 61  KWTRANDKARVYILASISDVLAKE------------------------------------ 120
           +W +AN+KA VYILAS+SDVLAK+                                    
Sbjct: 61  RWIKANEKACVYILASMSDVLAKKYESLTTAKEIMDSLKGMFGQPKWSLRHETIKYIYIK 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 RMKEGTSVREHVLDMMIHFNIAEVNGGAIDEAMRIGRLVKNGLLSQFEDNSLLPCDSCLE 180

[Close]

BLAST of Tan0009093 vs. ExPASy TrEMBL
Match: A0A5D3E1K0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00190 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.4e-46
Identity = 118/278 (42.45%), Postives = 139/278 (50.00%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           M+SS +QLLAS+KLNGDN+  WKSNLNTIL + DLRFVLT +CP  P+S+A RT R A+D
Sbjct: 1   MNSSIVQLLASEKLNGDNYAAWKSNLNTILDVGDLRFVLTGKCPQTPASNANRTSRKAYD 60

Query: 61  KWTRANDKARVYILASISDVLAKE------------------------------------ 120
           +W +AN+KARVYILAS+SDVLAK+                                    
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHKSLATAKEIMDSLKGMFGQPELFLGHDVIKYIHTK 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 QMKEGTSIREHVLDMMMHFNIAEVNGSVIDEGNQVSFILESLPKSFIPFQTNVSLNKIEF 180

[Close]

BLAST of Tan0009093 vs. ExPASy TrEMBL
Match: A0A5A7UWW4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G001280 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.8e-45
Identity = 118/282 (41.84%), Postives = 134/282 (47.52%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           MSSS I LL  D+L  +N+ TWKS LN ILVI DLRFVL EECP  P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKIDQLTDENYATWKSKLNMILVIADLRFVLMEECPPFPTKYASQSVRDAYD 60

Query: 61  KWTRANDKARVYILASISDVL--------------------------------------- 120
           +WT+ANDK+R++IL S+SD+L                                       
Sbjct: 61  RWTKANDKSRLHILTSMSDILSKKHEIMIKQEANVAHSRRFAPSSSGSEKIQKRKEGKGK 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 GPTITVEGKGKTKVVIKGKCFHCNVDEHWKKNCPKYLVKKKEKEGATNHVCSSLQETSSF 180

[Close]

BLAST of Tan0009093 vs. ExPASy TrEMBL
Match: A0A5D3DDH0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00180 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 5.0e-42
Identity = 117/297 (39.39%), Postives = 133/297 (44.78%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNGDNFGTWKSNLNTILVIDDLRFVLTEECPSPPSSSATRTVRDAFD 60
           MSSS I LL  D+L G N+  WKS LN ILVI DLRFVL E+CP   +  A+++VRDA+D
Sbjct: 1   MSSSIIALLKKDQLTGKNYAMWKSKLNMILVIADLRFVLMEKCPPFSTKYASQSVRDAYD 60

Query: 61  KWTRANDKARVYILASISDVL--------------------------------------- 120
           +WT+AND+A ++ILAS+SD+L                                       
Sbjct: 61  RWTKANDEAHLHILASMSDILSEKHEIMKRKEGKGKGPTIAVEGKGKTKVVIKGKCFHCN 120

Query: 121 ------------------------------------------------------------ 159
                                                                       
Sbjct: 121 VDEHWKTNCSKYLVKKKEKEETSSFKQLEESEMTLKVGTGDVISARALGDAKLGHINLDR 180

The following BLAST results are available for this feature:

BLAST of Tan0009093 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	6.1e-13	43.84	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	8.5e-07	36.14	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	3.2e-06	32.00	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	4.2e-06	34.94	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12491	8.0e-05	30.26	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Tan0009093 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054515.1	3.0e-49	46.72	gag/pol protein [Cucumis melo var. makuwa] >TYJ98280.1 gag/pol protein [Cucumis ...	[more]
KAA0059677.1	6.2e-47	43.17	gag/pol protein [Cucumis melo var. makuwa] >TYK26116.1 gag/pol protein [Cucumis ...	[more]
TYK29762.1	1.5e-45	42.45	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059678.1	9.9e-45	41.84	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ98650.1	6.0e-42	43.65	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0009093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ULG4	1.4e-49	46.72	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G0025...	[more]
A0A5A7UYF5	3.0e-47	43.17	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G0029...	[more]
A0A5D3E1K0	7.4e-46	42.45	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G001...	[more]
A0A5A7UWW4	4.8e-45	41.84	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00128...	[more]
A0A5D3DDH0	5.0e-42	39.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G001...	[more]

BLAST of Tan0009093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 79..158 e-value: 2.3E-12 score: 48.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 81..158 score: 10.189523
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 82..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0009093.1	Tan0009093.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding