Tan0009074 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATGAATAAAGGAAGCTCCCATTCAAAAGAGAAACTGACTGTGGGTCGTTCTTCATCTTCCAGTGAAGTGAAAAAGCCTGCAGAAAAAGATTTGAGCTCCTCCACATTTGTTAATCAGGGTAATAAGCAAGCATGTAGGAAGTTTGTAATTGCAGTTTCAGATTTGATATTTGATATGCATGAGCCACCTGTTTTCCAGTTTCTTGGAATTAGTATTTCTTTGTGCTTGATTGCGCCTGCTATAATTGATGACCCCATGGAATTTAAGACTCTTAAATAAATGCTCAAAAGAAAAGGAAAAAAAAAAGAAAAAAAAAGTATATCTCGTTATTTGGTTCTATTCATGCAAATATTTTTTAGGTTCTTTATAGCAATTTATGTATTCCATTCAATTTAGAGGCTTCAACTAAATGGTGACTGACAATGCGAAGCAACAAAATTCAAATCCCATCTAGTTTCTTGGATGGGGTTGGAATCTGTCGATGATCTAGAATTTCACTTTCTTAAAGCGTGAATTTAATAATGATAGAAATATTGGATTGAAAGGAAAGTGGACTAGTAGTTATGGTGGCTTGGGAGAGGAGGAGGTTTTCTGAGGGAAGATTGGCACCTTCATGACCTATACATTTTTGTTTCATTGATTGAATATCAGATGATGCATATCATGAAAAAGAATCTACTACGAGTTAAAATTGAACATCTGGTAGAACTAGAAGGACATATCTCCCAGCACAAATAAATATACAAGTTGCTTAATTGATGTGACAACTGTACCTCTTTTGGCCTTTAAATGTTCATGAATTGTCTTAAATAAGCTGTTTGTTTCTTCTAGCTTAGATTTCTTAAAATAGTGACAGTAACTTTTAGTTCATTACGTTTTGTTTGAAATGTACTTTTCATTGTCAATCTGATTGGATGTGTTGTGTAGCTGCAATTCGTTGGCATGAGAGTAGAAAGAAGTGGATTGATAAACAATCTCAGCAACAACAAAGAATGGAGAGGGAATCAATCATAAGGTGATCTCTCGCTCTCCTGAATGTTCTCAGTTGCAGAATAGTTAAATCATTCCATGTCGTGCTTTTGCTTGCAAGTAGTTTAGTTGGTGAACTTGAAAAAAAGTTTATAAATCATAATAAAATGAAGAATTCTGCGCATACGGTGAAAGTTGAACAAGAAATCCTACTATGGTTATGATATTACCCAAAACACTATAATAGTATTAAATTGAATCCCGAAAGATAACAGCAAATTAACCCAAACAGGAGTAGGTAAATAAGTAGACCTTCCAATTTTTGAGGATCAAAATATGCCTGAAGATATTAACTTAAGCCTATAGATTTTAAGCAAAGCTTTTCTAAATGTCAAGGTAGTCATTACTCTGACCAAACCCCACGGGAAGGAAATTAGATAATGATTGAAATAAAAAGTTGTAATTCTACCCACCTGAGCACATCTTAATTGGGTAAGACAGCTATCCTCGATCAAAAGGTCATATGTTCAAATCCTTCCATTTAGCATGTGGTTGAACTTTAGAACCGAAGGATACACACTTGTACAACCTATAGAGCGAATTCTGTCCAAGTAAGGTCGTACATGTTGTTGAGCTAAAAAAAAGTTTTGTAATTCTTGAAATAACTCTTTGGTGGGGGATAACTCTTCCATATCCATAACTAATGAAGCAAGATTATCTATAATCGCTCGATTCAAATGCGCAGTCGCTGACTCACTGGTCCTTGTCATTCTGAATGATGCAAAAGTCTTAGCATAAAGAGAAGAAAAAGGAAAAGCAGAAAGAGGTCATTGTATATCTTGAAGGAACATACCTTTTCCATTTTTTAATAACCAAGTATTTGATTTTCTTCTGTTGCTTTCCTTCACCCCTAGCAAAAAAACATTTGTCGTTACAAACATAATCTGAATGATGAATTTTTCACTTTAAATTTGCAGCTGGTCAACAGCATACGAAGATCTGCTCTCCACCAACGAGCCCTTCACTGAGCCAATACCTCTCACAGTAAGCTTCTGAAAAGTGCATGCAATTTCTATATATGTACCTGCATATATAGTCTCCCTTTGACCGTTAATCTATATATGTACCTGCAATACCTCAATCAGTTTTCTTTTTGTCTTTCTCTCTCGAGTTCAACTATATGTGGGAGTGAAGATTTAAACCTCGACCTTTTCGATCTGAGACCAGGATTCTGTTGTTCTGGTTTCATATTTTCTTGATTCTTTTCAATGAGCATGTTGCGATTGTTGATGCTTGTAATATGACTGGCAGGAGATGGTAGATTTCTTGGTTGATATTTGGCAAGATGAAGGGCTTTTCGATTAG ATGGAAATGAATAAAGGAAGCTCCCATTCAAAAGAGAAACTGACTGTGGGTCGTTCTTCATCTTCCAGTGAAGTGAAAAAGCCTGCAGAAAAAGATTTGAGCTCCTCCACATTTGTTAATCAGGCTGCAATTCGTTGGCATGAGAGTAGAAAGAAGTGGATTGATAAACAATCTCAGCAACAACAAAGAATGGAGAGGGAATCAATCATAAGCTGGTCAACAGCATACGAAGATCTGCTCTCCACCAACGAGCCCTTCACTGAGCCAATACCTCTCACAGAGATGGTAGATTTCTTGGTTGATATTTGGCAAGATGAAGGGCTTTTCGATTAG ATGGAAATGAATAAAGGAAGCTCCCATTCAAAAGAGAAACTGACTGTGGGTCGTTCTTCATCTTCCAGTGAAGTGAAAAAGCCTGCAGAAAAAGATTTGAGCTCCTCCACATTTGTTAATCAGGCTGCAATTCGTTGGCATGAGAGTAGAAAGAAGTGGATTGATAAACAATCTCAGCAACAACAAAGAATGGAGAGGGAATCAATCATAAGCTGGTCAACAGCATACGAAGATCTGCTCTCCACCAACGAGCCCTTCACTGAGCCAATACCTCTCACAGAGATGGTAGATTTCTTGGTTGATATTTGGCAAGATGAAGGGCTTTTCGATTAG MEMNKGSSHSKEKLTVGRSSSSSEVKKPAEKDLSSSTFVNQAAIRWHESRKKWIDKQSQQQQRMERESIISWSTAYEDLLSTNEPFTEPIPLTEMVDFLVDIWQDEGLFD Homology
BLAST of Tan0009074 vs. NCBI nr
Match: XP_038886790.1 (uncharacterized protein LOC120076904 [Benincasa hispida] >XP_038886792.1 uncharacterized protein LOC120076904 [Benincasa hispida] >XP_038886793.1 uncharacterized protein LOC120076904 [Benincasa hispida] >XP_038886794.1 uncharacterized protein LOC120076904 [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 6.2e-46 Identity = 99/110 (90.00%), Postives = 103/110 (93.64%), Query Frame = 0
BLAST of Tan0009074 vs. NCBI nr
Match: XP_022134091.1 (uncharacterized protein LOC111006447 [Momordica charantia]) HSP 1 Score: 185.3 bits (469), Expect = 2.9e-43 Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. NCBI nr
Match: XP_022957458.1 (uncharacterized protein LOC111458848 isoform X1 [Cucurbita moschata] >KAG6602292.1 hypothetical protein SDJN03_07525, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42 Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. NCBI nr
Match: XP_022957466.1 (uncharacterized protein LOC111458848 isoform X2 [Cucurbita moschata]) HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42 Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. NCBI nr
Match: XP_022957473.1 (uncharacterized protein LOC111458848 isoform X3 [Cucurbita moschata] >XP_022957481.1 uncharacterized protein LOC111458848 isoform X3 [Cucurbita moschata] >XP_022957490.1 uncharacterized protein LOC111458848 isoform X3 [Cucurbita moschata] >XP_022990494.1 uncharacterized protein LOC111487341 [Cucurbita maxima] >XP_022990496.1 uncharacterized protein LOC111487341 [Cucurbita maxima] >XP_022990497.1 uncharacterized protein LOC111487341 [Cucurbita maxima] >XP_022990498.1 uncharacterized protein LOC111487341 [Cucurbita maxima] >XP_022990499.1 uncharacterized protein LOC111487341 [Cucurbita maxima] >XP_022990500.1 uncharacterized protein LOC111487341 [Cucurbita maxima] >XP_023528467.1 uncharacterized protein LOC111791378 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023528477.1 uncharacterized protein LOC111791378 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023528483.1 uncharacterized protein LOC111791378 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023528491.1 uncharacterized protein LOC111791378 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7032973.1 hypothetical protein SDJN02_07024, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42 Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. ExPASy TrEMBL
Match: A0A0A0LK63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324430 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45 Identity = 98/110 (89.09%), Postives = 103/110 (93.64%), Query Frame = 0
BLAST of Tan0009074 vs. ExPASy TrEMBL
Match: A0A6J1BWZ9 (uncharacterized protein LOC111006447 OS=Momordica charantia OX=3673 GN=LOC111006447 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43 Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. ExPASy TrEMBL
Match: A0A6J1JTG3 (uncharacterized protein LOC111487341 OS=Cucurbita maxima OX=3661 GN=LOC111487341 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. ExPASy TrEMBL
Match: A0A6J1H0B4 (uncharacterized protein LOC111458848 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111458848 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. ExPASy TrEMBL
Match: A0A6J1GZA2 (uncharacterized protein LOC111458848 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458848 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42 Identity = 95/110 (86.36%), Postives = 102/110 (92.73%), Query Frame = 0
BLAST of Tan0009074 vs. TAIR 10
Match: AT3G54880.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 137 Blast hits to 137 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 55/106 (51.89%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of Tan0009074 vs. TAIR 10
Match: AT5G03440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17 Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Tan0009074 vs. TAIR 10
Match: AT5G03440.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17 Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 0
BLAST of Tan0009074 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 6.1e-15 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0
BLAST of Tan0009074 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). ) HSP 1 Score: 77.8 bits (190), Expect = 6.1e-15 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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