Tan0008971 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAACTAATCGCATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGGTAACTGCGTTGAATATTGTCCAACAAATTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTAAATTATAATCAAATTTCTTTGGGTCGTTTACCAATGTCAGTAGTTGATGATTATACAATTAGAACAATTTTGAATTCGCCTCGAATTTAAGTCTAAAATAAGTAAATCCCTTGATTAAAGAGTAATTGGAAATTACTAAGGTTATGTTTTGATCTAAAGAAATGAGGTTTCTTTCGTTTTGTTTGTTTGGTCACTAGCTACAAATCCAAACTATTGATTCATTAGAATTGCGGCTTAATTTAGATTTCAATTTCGATTGAAACTATATATTTCGAAATATATAGTTTCAATCGACTCTACTCTTTCAGATCAAGACTAAGATTAATACAATAACTGTACCTACATGAATTAACACCCCCCTAAGATTTAATTAGGAATTGATTATCCATTTTTTTTCCCGGTCAGATCAATAAGGTCATGAAAAACATTTAGATTGATTTATCTCTTTTTTTACTACATATAATGGATTTGCCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACGCCATTTATTCTGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCCTTATTCTATATTCTAGCAAACGCCCAGTTTGTAGCTGCTGCGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTGCTGTGATGTTCATGAAGGGTTCAGAATATTCCAAAGATTTTAATCTTTGGACCGTTGGGAGTGGAGTTACTTTTCTGGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAACCAGATTCTAGAACAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTATTTATCAACATATTTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTAGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGCCAGTAATAAATCTTTAGTTAGAAATAGCATAAATTAAACTTTGTTCTATGTTATCACACACATTCCCCTTCAATTCTATTTGAAGATTGTTTCTGTCTAAAATCAAAATTCTTTTAGTCGATCGATTACCAATATATTCCCTTGTTCTGTACTTTTTTTTTGTCAATTGAATTGAATCTATTAAATTTTTGTTCATATTGAAATGAATCGGAATTGATAAGGAGTTGGTCAATCATGCTCGAACATGTCCTTGTTATAAGTGCCTATTTATTTTCTATCGGTATCTATGGATTGATCACGAGCCGAAATATGGTTAGAGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATGAATTTCGTAACATTTTCTGATTTTTTTGATAGTCGCCAATTAAAAGGGAATATTTTCTCAATTTTTGTTATAGCTATTGCAGCCGCTGAAGCAGCTATTGGCCCAGCTATTGTTTCGTCAATTTATCGTAACAGAAAATCAACTCGTATCAATCAATCGAATTTGTTGAATAAGTAG ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAACTAATCGCATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGCCAGAGTTGGTCAATCATGCTCGAACATGTCCTTGTTATAAGTGCCTATTTATTTTCTATCGGTATCTATGGATTGATCACGAGCCGAAATATGGTTAGAGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATGAATTTCGTAACATTTTCTGATTTTTTTGATAGTCGCCAATTAAAAGGGAATATTTTCTCAATTTTTGTTATAGCTATTGCAGCCGCTGAAGCAGCTATTGGCCCAGCTATTGTTTCGTCAATTTATCGTAACAGAAAATCAACTCGTATCAATCAATCGAATTTGTTGAATAAGTAG ATGTTCCCTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTACGAAAAACTAATCGCATCGGAGCGTTTCCGCGGTCGAATCCATTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTCGGGATCTGTATATTTTGTGCTGCTTTGATCGGCGCAATTGCCGTGGCTCGCCAGAGTTGGTCAATCATGCTCGAACATGTCCTTGTTATAAGTGCCTATTTATTTTCTATCGGTATCTATGGATTGATCACGAGCCGAAATATGGTTAGAGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATGAATTTCGTAACATTTTCTGATTTTTTTGATAGTCGCCAATTAAAAGGGAATATTTTCTCAATTTTTGTTATAGCTATTGCAGCCGCTGAAGCAGCTATTGGCCCAGCTATTGTTTCGTCAATTTATCGTAACAGAAAATCAACTCGTATCAATCAATCGAATTTGTTGAATAAGTAG MFPMVTGFMNYGQQTVRAARYIGQGFMITLSHANRLPVTIQYPYEKLIASERFRGRIHFEFDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCAALIGAIAVARQSWSIMLEHVLVISAYLFSIGIYGLITSRNMVRALMCLELILNAVNMNFVTFSDFFDSRQLKGNIFSIFVIAIAAAEAAIGPAIVSSIYRNRKSTRINQSNLLNK Homology
BLAST of Tan0008971 vs. ExPASy Swiss-Prot
Match: Q2QD37 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhI PE=3 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.9e-59 Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy Swiss-Prot
Match: Q09FQ6 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nandina domestica OX=41776 GN=ndhI PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.9e-58 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy Swiss-Prot
Match: Q49KU4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=ndhI PE=3 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 5.1e-58 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy Swiss-Prot
Match: Q8HVW2 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Acmella radicans OX=217838 GN=ndhI PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 6.7e-58 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy Swiss-Prot
Match: Q8HVV8 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Ambrosia trifida OX=4214 GN=ndhI PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 6.7e-58 Identity = 105/107 (98.13%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of Tan0008971 vs. NCBI nr
Match: KAF4400800.1 (hypothetical protein G4B88_004343 [Cannabis sativa]) HSP 1 Score: 338.6 bits (867), Expect = 4.2e-89 Identity = 205/388 (52.84%), Postives = 211/388 (54.38%), Query Frame = 0
BLAST of Tan0008971 vs. NCBI nr
Match: RYR58339.1 (hypothetical protein Ahy_A05g024027 [Arachis hypogaea]) HSP 1 Score: 322.0 bits (824), Expect = 4.0e-84 Identity = 203/398 (51.01%), Postives = 207/398 (52.01%), Query Frame = 0
BLAST of Tan0008971 vs. NCBI nr
Match: BBH03065.1 (hypothetical protein Prudu_013827 [Prunus dulcis]) HSP 1 Score: 280.0 bits (715), Expect = 1.8e-71 Identity = 190/436 (43.58%), Postives = 195/436 (44.72%), Query Frame = 0
BLAST of Tan0008971 vs. NCBI nr
Match: KAF4348543.1 (hypothetical protein F8388_000222 [Cannabis sativa]) HSP 1 Score: 234.6 bits (597), Expect = 8.4e-58 Identity = 142/274 (51.82%), Postives = 162/274 (59.12%), Query Frame = 0
BLAST of Tan0008971 vs. NCBI nr
Match: QJD26525.1 (NdhI [Trichosanthes kirilowii var. japonica] >QJD26612.1 NdhI [Trichosanthes kirilowii var. japonica]) HSP 1 Score: 229.9 bits (585), Expect = 2.1e-56 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy TrEMBL
Match: A0A7J6I2E8 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_004343 PE=3 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 2.0e-89 Identity = 205/388 (52.84%), Postives = 211/388 (54.38%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy TrEMBL
Match: A0A445D565 (9 kDa polypeptide OS=Arachis hypogaea OX=3818 GN=Ahy_A05g024027 PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.9e-84 Identity = 203/398 (51.01%), Postives = 207/398 (52.01%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy TrEMBL
Match: A0A4Y1RG88 (9 kDa polypeptide OS=Prunus dulcis OX=3755 GN=Prudu_013827 PE=3 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 8.5e-72 Identity = 190/436 (43.58%), Postives = 195/436 (44.72%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy TrEMBL
Match: A0A7J6DR26 (9 kDa polypeptide OS=Cannabis sativa OX=3483 GN=F8388_000222 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 4.1e-58 Identity = 142/274 (51.82%), Postives = 162/274 (59.12%), Query Frame = 0
BLAST of Tan0008971 vs. ExPASy TrEMBL
Match: A0A6H0ERZ5 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=ndhI PE=3 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 1.0e-56 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Tan0008971 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases ) HSP 1 Score: 221.1 bits (562), Expect = 9.0e-58 Identity = 101/107 (94.39%), Postives = 104/107 (97.20%), Query Frame = 0
BLAST of Tan0008971 vs. TAIR 10
Match: ATCG01070.1 (NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ) HSP 1 Score: 161.8 bits (408), Expect = 6.5e-40 Identity = 89/101 (88.12%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Tan0008971 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin ) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08 Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0
BLAST of Tan0008971 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin ) HSP 1 Score: 57.4 bits (137), Expect = 1.7e-08 Identity = 32/89 (35.96%), Postives = 46/89 (51.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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