Tan0008942 (gene) Snake gourd v1

Overview


Name	Tan0008942
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG03: 81858064 .. 81858419 (-)
RNA-Seq Expression	Tan0008942
Synteny	Tan0008942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATGGAGTGCGACGATGATTGGAGCCCTTCTGGGGCTCGGCACTCAGATGTATTCCAATGCTCTTCGTAAACTCCCTTACATGCGCCGTACGGCTCTTTAAAAAAACCCTAACCTTCTCCTTTCCCGATCAGATTTTTCATAGCTCTTCCACTGTTTTCGATTTTTATCATTGATTTCATAGTTAATTTTGCAGATCCTTGGGAGCACTTGGTTGGAATGGGATTGGGAGCCGTGTTCGTCAATCAGCTGGTCAAATGGGACGCTAAGCTCCAGGAGGACCTTGACAAGATGCTCGAAAAGGCCAAAGCCGCCAACGAGCGCCGTTACTTTGGTCTTTTTCTTCTTCTATAA

mRNA sequence

ATGGCATGGAGTGCGACGATGATTGGAGCCCTTCTGGGGCTCGGCACTCAGATGTATTCCAATGCTCTTCGTAAACTCCCTTACATGCGCCATCCTTGGGAGCACTTGGTTGGAATGGGATTGGGAGCCGTGTTCGTCAATCAGCTGGTCAAATGGGACGCTAAGCTCCAGGAGGACCTTGACAAGATGCTCGAAAAGGCCAAAGCCGCCAACGAGCGCCGTTACTTTGGTCTTTTTCTTCTTCTATAA

Coding sequence (CDS)

ATGGCATGGAGTGCGACGATGATTGGAGCCCTTCTGGGGCTCGGCACTCAGATGTATTCCAATGCTCTTCGTAAACTCCCTTACATGCGCCATCCTTGGGAGCACTTGGTTGGAATGGGATTGGGAGCCGTGTTCGTCAATCAGCTGGTCAAATGGGACGCTAAGCTCCAGGAGGACCTTGACAAGATGCTCGAAAAGGCCAAAGCCGCCAACGAGCGCCGTTACTTTGGTCTTTTTCTTCTTCTATAA

Protein sequence

MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDLDKMLEKAKAANERRYFGLFLLL

Homology

[Close]

BLAST of Tan0008942 vs. NCBI nr
Match: KAE8647788.1 (hypothetical protein Csa_003686 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 8.8e-37
Identity = 78/82 (95.12%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYFGLFLLL 83
          DKML+KAKAANERRYFG+  LL
Sbjct: 61 DKMLDKAKAANERRYFGICFLL 82

[Close]

BLAST of Tan0008942 vs. NCBI nr
Match: KAG2689400.1 (hypothetical protein I3760_09G137100 [Carya illinoinensis] >KAG6696262.1 hypothetical protein I3842_09G139500 [Carya illinoinensis] >KAG7963797.1 hypothetical protein I3843_09G135800 [Carya illinoinensis])

HSP 1 Score: 161.8 bits (408), Expect = 2.6e-36
Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVFVNQLVKWDA+LQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAQLQEDL 60

Query: 61 DKMLEKAKAANERRYFGLFLLL 83
          DKML+KAKAANERRYFG F LL
Sbjct: 61 DKMLDKAKAANERRYFGNFFLL 82

[Close]

BLAST of Tan0008942 vs. NCBI nr
Match: KAA0052414.1 (uncharacterized protein E6C27_scaffold120G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 5.7e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYFG 78
          DKML+KAKAANERRYFG
Sbjct: 61 DKMLDKAKAANERRYFG 77

[Close]

BLAST of Tan0008942 vs. NCBI nr
Match: OWM75155.1 (hypothetical protein CDL15_Pgr012641 [Punica granatum])

HSP 1 Score: 158.7 bits (400), Expect = 2.2e-35
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDA+L+EDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVIGMGLGAVFVNQLVKWDAQLKEDL 60

Query: 61 DKMLEKAKAANERRYFGLF 80
          DKMLEKAKAANERRYFG F
Sbjct: 61 DKMLEKAKAANERRYFGTF 79

[Close]

BLAST of Tan0008942 vs. NCBI nr
Match: XP_008439421.1 (PREDICTED: uncharacterized protein LOC103484235 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 3.7e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYF 77
          DKML+KAKAANERRYF
Sbjct: 61 DKMLDKAKAANERRYF 76

[Close]

BLAST of Tan0008942 vs. ExPASy TrEMBL
Match: A0A5A7UAL0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G00090 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.8e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYFG 78
          DKML+KAKAANERRYFG
Sbjct: 61 DKMLDKAKAANERRYFG 77

[Close]

BLAST of Tan0008942 vs. ExPASy TrEMBL
Match: A0A218WQS1 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012641 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.0e-35
Identity = 74/79 (93.67%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH++GMGLGAVFVNQLVKWDA+L+EDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVIGMGLGAVFVNQLVKWDAQLKEDL 60

Query: 61 DKMLEKAKAANERRYFGLF 80
          DKMLEKAKAANERRYFG F
Sbjct: 61 DKMLEKAKAANERRYFGTF 79

[Close]

BLAST of Tan0008942 vs. ExPASy TrEMBL
Match: A0A6J1KPJ8 (uncharacterized protein LOC111497120 OS=Cucurbita maxima OX=3661 GN=LOC111497120 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYF 77
          DKMLEKAKAANERRYF
Sbjct: 61 DKMLEKAKAANERRYF 76

[Close]

BLAST of Tan0008942 vs. ExPASy TrEMBL
Match: A0A0A0KJ47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538720 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 75/76 (98.68%), Postives = 76/76 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60

Query: 61 DKMLEKAKAANERRYF 77
          DKML+KAKAANERRYF
Sbjct: 61 DKMLDKAKAANERRYF 76

[Close]

BLAST of Tan0008942 vs. ExPASy TrEMBL
Match: A0A067GPI2 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034827mg PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 74/77 (96.10%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHL+GMGLGAVFVNQLVKWDA+LQ+DL
Sbjct: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLLGMGLGAVFVNQLVKWDAQLQQDL 60

Query: 61 DKMLEKAKAANERRYFG 78
          DKMLEKAKAANERRYFG
Sbjct: 61 DKMLEKAKAANERRYFG 77

[Close]

BLAST of Tan0008942 vs. TAIR 10
Match: AT4G20150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, mitochondrial respiratory chain complex I, respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-33
Identity = 66/76 (86.84%), Postives = 70/76 (92.11%), Query Frame = 0


Query: 1  MAWSATMIGALLGLGTQMYSNALRKLPYMRHPWEHLVGMGLGAVFVNQLVKWDAKLQEDL 60
          M  SATM+GALLGLGTQMYSNALRKLPYMRHPWEH+VGMGLGAVF NQLVKWD KL+EDL
Sbjct: 1  MPISATMVGALLGLGTQMYSNALRKLPYMRHPWEHVVGMGLGAVFANQLVKWDVKLKEDL 60

Query: 61 DKMLEKAKAANERRYF 77
          D ML KA+AANERRYF
Sbjct: 61 DVMLAKARAANERRYF 76

The following BLAST results are available for this feature:

BLAST of Tan0008942 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0008942 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647788.1	8.8e-37	95.12	hypothetical protein Csa_003686 [Cucumis sativus]	[more]
KAG2689400.1	2.6e-36	93.90	hypothetical protein I3760_09G137100 [Carya illinoinensis] >KAG6696262.1 hypothe...	[more]
KAA0052414.1	5.7e-36	98.70	uncharacterized protein E6C27_scaffold120G00090 [Cucumis melo var. makuwa]	[more]
OWM75155.1	2.2e-35	93.67	hypothetical protein CDL15_Pgr012641 [Punica granatum]	[more]
XP_008439421.1	3.7e-35	98.68	PREDICTED: uncharacterized protein LOC103484235 [Cucumis melo]	[more]

BLAST of Tan0008942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UAL0	2.8e-36	98.70	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A218WQS1	1.0e-35	93.67	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr012641 PE=4 SV=1	[more]
A0A6J1KPJ8	1.8e-35	98.68	uncharacterized protein LOC111497120 OS=Cucurbita maxima OX=3661 GN=LOC111497120...	[more]
A0A0A0KJ47	1.8e-35	98.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G538720 PE=4 SV=1	[more]
A0A067GPI2	1.8e-35	96.10	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034827mg PE=4 SV=1	[more]

BLAST of Tan0008942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20150.1	1.3e-33	86.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 53..73
None	No IPR available	PANTHER	PTHR36052	EXCITATORY AMINO ACID TRANSPORTER	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008942.1	Tan0008942.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane