Tan0008931 (gene) Snake gourd v1

Overview


Name	Tan0008931
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ethylene-responsive transcription factor 12
Location	LG05: 75675136 .. 75675895 (+)
RNA-Seq Expression	Tan0008931
Synteny	Tan0008931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTTTGTGTTACCTTTTTGATTCATTCCCTCCTCCTCCACCAATGGCTTCCACTCGCGACGGCCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAGATACGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAAGGCCAAGACTAACTTCCCTCCGCCTCTCTCCGCCGCTCTCTCTCTCGACCTCAACGTCTCCGGACCCACTACCCCCGTCGCCACTTGTTCGCCTTCTTCCTCCTCCGCCCGTCTAGTCCTCGGCGATTTCCTCCGCCACGGCGGCCGCAGCGACATCTGCAATGTGAATGTGGAGCCCTCTCCGGCGACCAAACTCCTTCCTCCGGTGCTGGTGGACTCGAGCGCTCCCGCACCCTCCGCCACGGCGTCGTTTATTGGGCACGTGCGGCGCGGCCTCCCCTTTGATCTCAACGAGCCTCCCCCGGTGTGGCTATGATTCATTCAACGAGAAAAACCCCACCACGGCTTCTACCGGCGTTTTTTACGGACCCATTTCTCTCTCCCTTTTTGTCGTCTTTATTTTGACAGTCTTCTGTATCCACTTTTCACCCCCCTTGATTCAACAAAAAAAAAATTATGTAAATACAAGTTTTAGGTGGATATTGATTGATTTGTCATCCAAATTAAAAAATATATATATATAGTTCGCATCTTTTTTT

mRNA sequence

CTTTCTTTGTGTTACCTTTTTGATTCATTCCCTCCTCCTCCACCAATGGCTTCCACTCGCGACGGCCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAGATACGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAAGGCCAAGACTAACTTCCCTCCGCCTCTCTCCGCCGCTCTCTCTCTCGACCTCAACGTCTCCGGACCCACTACCCCCGTCGCCACTTGTTCGCCTTCTTCCTCCTCCGCCCGTCTAGTCCTCGGCGATTTCCTCCGCCACGGCGGCCGCAGCGACATCTGCAATGTGAATGTGGAGCCCTCTCCGGCGACCAAACTCCTTCCTCCGGTGCTGGTGGACTCGAGCGCTCCCGCACCCTCCGCCACGGCGTCGTTTATTGGGCACGTGCGGCGCGGCCTCCCCTTTGATCTCAACGAGCCTCCCCCGGTGTGGCTATGATTCATTCAACGAGAAAAACCCCACCACGGCTTCTACCGGCGTTTTTTACGGACCCATTTCTCTCTCCCTTTTTGTCGTCTTTATTTTGACAGTCTTCTGTATCCACTTTTCACCCCCCTTGATTCAACAAAAAAAAAATTATGTAAATACAAGTTTTAGGTGGATATTGATTGATTTGTCATCCAAATTAAAAAATATATATATATAGTTCGCATCTTTTTTT

Coding sequence (CDS)

ATGGCTTCCACTCGCGACGGCCACTACAGAGGCGTCCGAAAGCGTCCATGGGGTCGCTACGCCGCCGAGATACGCGACCCTTGGAAGAAGACCCGTGTCTGGTTGGGCACTTTCGATACCCCTGAAGAAGCCGCCCTTGCCTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAAGGCCAAGACTAACTTCCCTCCGCCTCTCTCCGCCGCTCTCTCTCTCGACCTCAACGTCTCCGGACCCACTACCCCCGTCGCCACTTGTTCGCCTTCTTCCTCCTCCGCCCGTCTAGTCCTCGGCGATTTCCTCCGCCACGGCGGCCGCAGCGACATCTGCAATGTGAATGTGGAGCCCTCTCCGGCGACCAAACTCCTTCCTCCGGTGCTGGTGGACTCGAGCGCTCCCGCACCCTCCGCCACGGCGTCGTTTATTGGGCACGTGCGGCGCGGCCTCCCCTTTGATCTCAACGAGCCTCCCCCGGTGTGGCTATGA

Protein sequence

MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPLSAALSLDLNVSGPTTPVATCSPSSSSARLVLGDFLRHGGRSDICNVNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRRGLPFDLNEPPPVWL

Homology

[Close]

BLAST of Tan0008931 vs. ExPASy Swiss-Prot
Match: Q94ID6 (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.0e-35
Identity = 99/194 (51.03%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 1   MAST---RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   R+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLSAALSLDLN--VSGPTTPVATCS------------------PSSSSARL 120
            KAKTNFP P    LSLDLN   S P+   A  +                  PSS     
Sbjct: 61  IKAKTNFPSP----LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQ 120

Query: 121 VLGDFLRHGGRSDICN--------VNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRR 164
               FLR G  +D  +        +    SP T    P       P  +++ S +  VRR
Sbjct: 121 HHRIFLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPV-TVRR 180

[Close]

BLAST of Tan0008931 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 74/190 (38.95%), Postives = 97/190 (51.05%), Query Frame = 0


Query: 4   TRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTN 63
           +++  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KAKTN
Sbjct: 23  SKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTN 82

Query: 64  FPPPLSAALS------------LDLNVSGPTTPVATCSPSSSSARLVLGDFLRHGGRSDI 123
           FP P +                +D        P+ +  P+SSS    +  F   G R   
Sbjct: 83  FPLPYAHHHQFNQGHNPNNDPFVDSRFYPQDNPIISQRPTSSSMSSTVESF--SGPRPPP 142

Query: 124 CNVNVEPSPATKLL--PPVLVDSSAPAPSATASFIGH------------------VRRGL 162
                  + + K    PPV+ D       +++S + H                   R+ L
Sbjct: 143 APRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCEKENDNDNDNIASSSFRKPL 202

[Close]

BLAST of Tan0008931 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.8e-23
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 5  RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          ++ H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPP 68
          P P
Sbjct: 89 PLP 91

[Close]

BLAST of Tan0008931 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-23
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 5  RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          ++ HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23 KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65 PPP 68
          P P
Sbjct: 83 PSP 85

[Close]

BLAST of Tan0008931 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.7e-23
Identity = 51/63 (80.95%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 5  RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          ++ HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23 KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 65 PPP 68
          P P
Sbjct: 83 PLP 85

[Close]

BLAST of Tan0008931 vs. NCBI nr
Match: XP_023001756.1 (ethylene-responsive transcription factor 12 [Cucurbita maxima])

HSP 1 Score: 255.4 bits (651), Expect = 3.4e-64
Identity = 133/171 (77.78%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSG-PTT---PVATCSP----SSSSARLVLGDFLRHGGRSDIC 120
           KTNFPPP    LSLDLNVS  PTT   P ++ +P    SSSSARL+LGDFLRHG R+D+C
Sbjct: 61  KTNFPPP----LSLDLNVSSTPTTCNWPSSSAAPSSSSSSSSARLLLGDFLRHGARNDLC 120

Query: 121 NVNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRRGLPFDLNEPPPVWL 164
           NVNVE SP        LVDS  PAP+ TASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVNVEASPG-------LVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]

BLAST of Tan0008931 vs. NCBI nr
Match: XP_022994485.1 (ethylene-responsive transcription factor 12-like [Cucurbita maxima])

HSP 1 Score: 254.6 bits (649), Expect = 5.8e-64
Identity = 135/166 (81.33%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAA-LSLDLNVSGPTTPVATCSPSSSSARLVLGDFLRHGG-RSDICNVNVEP 120
           KTNFP PLSAA L  DLNVS PT   ++ S SSSSARL+LGDFLRHG  R  +CNV+VE 
Sbjct: 61  KTNFPLPLSAAGLCFDLNVSRPTASPSSTSSSSSSARLLLGDFLRHGAPRHKMCNVDVEV 120

Query: 121 SPATKLLPPVLVDSSAPA-PSATASFIGHVRRGLPFDLNEPPPVWL 164
           S       PVLVDSSAP  PS+TASFIGHVRR LPFDLNEPPPVWL
Sbjct: 121 S-------PVLVDSSAPTPPSSTASFIGHVRRVLPFDLNEPPPVWL 159

[Close]

BLAST of Tan0008931 vs. NCBI nr
Match: KAG6583981.1 (Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.6 bits (649), Expect = 5.8e-64
Identity = 135/179 (75.42%), Postives = 142/179 (79.33%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSG-PTT-----------PVATCSPSSSS----ARLVLGDFLR 120
           KTNFPPP    LSLDLNVS  PTT             AT +PSSSS    ARL+LGDFLR
Sbjct: 61  KTNFPPP----LSLDLNVSSTPTTCNWPSSSSSAAAAATAAPSSSSSSSAARLLLGDFLR 120

Query: 121 HGGRSDICNVNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRRGLPFDLNEPPPVWL 164
           HG R+D+CNVNVE SP        LVDSS PAP+ TASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 HGARNDLCNVNVEASPG-------LVDSSDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 168

[Close]

BLAST of Tan0008931 vs. NCBI nr
Match: XP_008442801.1 (PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA0057008.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa] >TYK26435.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa])

HSP 1 Score: 254.6 bits (649), Expect = 5.8e-64
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSGP------TTPVATCSPSSSSARLVLGDFLRHGGRSDICNV 120
           KTNFPPPL   LSLDLNVSGP        P ++ S SSSSAR +LGDFLRHG R+D+CN+
Sbjct: 61  KTNFPPPL-PGLSLDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDMCNL 120

Query: 121 NVEPSPATKLLPPVLVDSSAPAPS-ATASFIGHVRRGLPFDLNEPPPVWL 164
           NV+ +       PVLVD+SA A S A+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVDAA------SPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of Tan0008931 vs. NCBI nr
Match: XP_004146616.1 (ethylene-responsive transcription factor 12 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-63
Identity = 134/172 (77.91%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSGP-TTPV-------ATCSPSSSSARLVLGDFLRHGGRSDIC 120
           KTNFPPPL   LSLDLNVSGP  TP        ++ SPS SS R +LGDFLRHG R+DIC
Sbjct: 61  KTNFPPPL-PGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDIC 120

Query: 121 NVNVEPSPATKLLPPVLVDSSAPAPS-ATASFIGHVRRGLPFDLNEPPPVWL 164
           N+NV+ S       PVLVDSSA   S A+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDAS-------PVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of Tan0008931 vs. ExPASy TrEMBL
Match: A0A6J1KJH9 (ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC111495799 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 133/171 (77.78%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREAHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSG-PTT---PVATCSP----SSSSARLVLGDFLRHGGRSDIC 120
           KTNFPPP    LSLDLNVS  PTT   P ++ +P    SSSSARL+LGDFLRHG R+D+C
Sbjct: 61  KTNFPPP----LSLDLNVSSTPTTCNWPSSSAAPSSSSSSSSARLLLGDFLRHGARNDLC 120

Query: 121 NVNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRRGLPFDLNEPPPVWL 164
           NVNVE SP        LVDS  PAP+ TASF+GHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVNVEASPG-------LVDSRDPAPNTTASFMGHVRRGLPFDLNEPPPVWL 160

[Close]

BLAST of Tan0008931 vs. ExPASy TrEMBL
Match: A0A5D3DSV2 (Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00990 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSGP------TTPVATCSPSSSSARLVLGDFLRHGGRSDICNV 120
           KTNFPPPL   LSLDLNVSGP        P ++ S SSSSAR +LGDFLRHG R+D+CN+
Sbjct: 61  KTNFPPPL-PGLSLDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDMCNL 120

Query: 121 NVEPSPATKLLPPVLVDSSAPAPS-ATASFIGHVRRGLPFDLNEPPPVWL 164
           NV+ +       PVLVD+SA A S A+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVDAA------SPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of Tan0008931 vs. ExPASy TrEMBL
Match: A0A6J1K1B3 (ethylene-responsive transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111490195 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 135/166 (81.33%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAA-LSLDLNVSGPTTPVATCSPSSSSARLVLGDFLRHGG-RSDICNVNVEP 120
           KTNFP PLSAA L  DLNVS PT   ++ S SSSSARL+LGDFLRHG  R  +CNV+VE 
Sbjct: 61  KTNFPLPLSAAGLCFDLNVSRPTASPSSTSSSSSSARLLLGDFLRHGAPRHKMCNVDVEV 120

Query: 121 SPATKLLPPVLVDSSAPA-PSATASFIGHVRRGLPFDLNEPPPVWL 164
           S       PVLVDSSAP  PS+TASFIGHVRR LPFDLNEPPPVWL
Sbjct: 121 S-------PVLVDSSAPTPPSSTASFIGHVRRVLPFDLNEPPPVWL 159

[Close]

BLAST of Tan0008931 vs. ExPASy TrEMBL
Match: A0A1S3B631 (ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486573 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.8e-64
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSGP------TTPVATCSPSSSSARLVLGDFLRHGGRSDICNV 120
           KTNFPPPL   LSLDLNVSGP        P ++ S SSSSAR +LGDFLRHG R+D+CN+
Sbjct: 61  KTNFPPPL-PGLSLDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDMCNL 120

Query: 121 NVEPSPATKLLPPVLVDSSAPAPS-ATASFIGHVRRGLPFDLNEPPPVWL 164
           NV+ +       PVLVD+SA A S A+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NVDAA------SPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of Tan0008931 vs. ExPASy TrEMBL
Match: A0A0A0LSE4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.2e-64
Identity = 134/172 (77.91%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 1   MASTRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60
           MASTR+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA
Sbjct: 1   MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 60

Query: 61  KTNFPPPLSAALSLDLNVSGP-TTPV-------ATCSPSSSSARLVLGDFLRHGGRSDIC 120
           KTNFPPPL   LSLDLNVSGP  TP        ++ SPS SS R +LGDFLRHG R+DIC
Sbjct: 61  KTNFPPPL-PGLSLDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRNDIC 120

Query: 121 NVNVEPSPATKLLPPVLVDSSAPAPS-ATASFIGHVRRGLPFDLNEPPPVWL 164
           N+NV+ S       PVLVDSSA   S A+ASFIGHVRRGLPFDLNEPPPVWL
Sbjct: 121 NLNVDAS-------PVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of Tan0008931 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-36
Identity = 99/194 (51.03%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 1   MAST---RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAST   R+ HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPLSAALSLDLN--VSGPTTPVATCS------------------PSSSSARL 120
            KAKTNFP P    LSLDLN   S P+   A  +                  PSS     
Sbjct: 61  IKAKTNFPSP----LSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQ 120

Query: 121 VLGDFLRHGGRSDICN--------VNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRR 164
               FLR G  +D  +        +    SP T    P       P  +++ S +  VRR
Sbjct: 121 HHRIFLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPV-TVRR 180

[Close]

BLAST of Tan0008931 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 5  RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 64
          ++ H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 65 PPP 68
          P P
Sbjct: 89 PLP 91

[Close]

BLAST of Tan0008931 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 108.6 bits (270), Expect = 4.8e-24
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 3  STRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
          S ++  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KAKT
Sbjct: 22 SVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKT 81

Query: 63 NFP 66
          NFP
Sbjct: 82 NFP 84

[Close]

BLAST of Tan0008931 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 76/175 (43.43%), Postives = 86/175 (49.14%), Query Frame = 0


Query: 3   STRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           + ++  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 63  NFPPPL-------------SAALSLDLNVSGPTT---PVATCSPSSSSARLVLGDFLRHG 122
           NFP  L             S + S  L+ + P T   P AT         L LG     G
Sbjct: 79  NFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLG-----G 138

Query: 123 GRSDICNVNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRRGLPFDLNEPPPV 162
           G    C                 +  S P        IG+V RG      +PPPV
Sbjct: 139 GGGGSC---------------YQIPMSRPVYFLDLMGIGNVGRG------QPPPV 167

[Close]

BLAST of Tan0008931 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 105.5 bits (262), Expect = 4.0e-23
Identity = 69/172 (40.12%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 3   STRDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKT 62
           S ++  YRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+  +AA AYD AAR+LRG KAKT
Sbjct: 21  SVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKT 80

Query: 63  NFPPPLSAALSLDLNVSGPTTPVA------TCSPSSSSARLVLGDFLRH-----GGRSDI 122
           NFP        +D + S P  P+        CSP     +  +  F+ H     G   + 
Sbjct: 81  NFP--------IDCSPSSPLQPLTYLHNQNLCSPPVIQNQ--IDPFMDHRLYGGGNFQEQ 140

Query: 123 CNVNVEPSPATKLLPPVLVDSSAPAPSATASFIGHVRRGLPFDLNEP--PPV 162
               +   PA+  +   +   S P P   A+    V + L      P  PPV
Sbjct: 141 QQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTPPV 182

The following BLAST results are available for this feature:

BLAST of Tan0008931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID6	2.0e-35	51.03	Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9SXS8	2.7e-24	38.95	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
Q9FE67	1.8e-23	82.54	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	3.9e-23	80.95	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	6.7e-23	80.95	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]

BLAST of Tan0008931 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001756.1	3.4e-64	77.78	ethylene-responsive transcription factor 12 [Cucurbita maxima]	[more]
XP_022994485.1	5.8e-64	81.33	ethylene-responsive transcription factor 12-like [Cucurbita maxima]	[more]
KAG6583981.1	5.8e-64	75.42	Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma sub...	[more]
XP_008442801.1	5.8e-64	77.65	PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA005700...	[more]
XP_004146616.1	1.3e-63	77.91	ethylene-responsive transcription factor 12 [Cucumis sativus]	[more]

BLAST of Tan0008931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KJH9	1.6e-64	77.78	ethylene-responsive transcription factor 12 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3DSV2	2.8e-64	77.65	Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1K1B3	2.8e-64	81.33	ethylene-responsive transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3B631	2.8e-64	77.65	ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486...	[more]
A0A0A0LSE4	6.2e-64	77.91	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=...	[more]

BLAST of Tan0008931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28360.1	1.4e-36	51.03	ERF domain protein 12	[more]
AT5G44210.1	1.3e-24	82.54	erf domain protein 9	[more]
AT1G50640.1	4.8e-24	77.78	ethylene responsive element binding factor 3	[more]
AT3G15210.1	2.4e-23	43.43	ethylene responsive element binding factor 4	[more]
AT3G20310.1	4.0e-23	40.12	ethylene response factor 7	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 9..20 score: 66.67 coord: 31..47 score: 70.59
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 8..71 e-value: 5.4E-37 score: 138.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 8..57 e-value: 1.6E-14 score: 53.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 8..65 score: 22.760784
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 8..65 e-value: 7.42748E-32 score: 106.972
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 8..66 e-value: 2.5E-27 score: 96.8
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 1..153
None	No IPR available	PANTHER	PTHR31677:SF116	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE	coord: 1..153
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 8..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008931.1	Tan0008931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity