Tan0008816 (gene) Snake gourd v1

Overview


Name	Tan0008816
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RAB6-interacting golgin
Location	LG08: 69525227 .. 69527718 (+)
RNA-Seq Expression	Tan0008816
Synteny	Tan0008816

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTAAGCTGGGTTGGCACTTTCGAAAGCAATTCTAGTTTTATAAGCACTTGCAGTTGCAGTACCCACACAGCTGAAAAAAAATTGAAATACAGCACAAACCCCATAATCATTTCAAAAGCAAAAGCAAAAGAAGAGAGAGAAAAACAAAAACCCAAAAGCCAAAACCAAAAACAGAGAGAGAGAGAGAGAAAGCAACAAACCCAGAAAGAAAGGAAGAAGAAGAAGAAGAAGAAGAACAACAACAACAACAACAGAGAAACTGAAGGAAATTCAAAGAAGAAGAAAAAGGGTTTTGTGGTTAAGAAGATGCAGCCAGAACAAGCTCAACAACAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTTTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTCGCTTGTATCCGTGAGGTAAGGGAGCAAAGAAATTGGAAAATCATCACAAGATTTAAGGGTTTTGCTGGGATTTTTGTTTATGAGATACCCTTTTAACTTTTCTGTTATGTTTTATATGAATTTGGTGGGTTAAGGGAAAAAGTTGGGGCTAAAATTACTGAAGATCTCTTGAAACTGACTAATTTTGGGGTTAATCTTTGTCTAAAAGGTCTGAGGACAAAGGGTTTTTAACCCCTTTTTGGCTGATTTAGTTCTGTTATCTATGGTGTTTGGGATTAAATTAATGTTTTGTTAAGGGATTATAAGCAGCTTTATGTCAGATTTGTAAGTTTCTTTGGATTCTTTTGACTTGCATTCTTAACCTAGACACTTTTATCAAGATAATGTTCTAATTTTCATGTATTTTCCATACATTAGTTACCTGAAAGTGTTAGAAGAAATTTGAGGCTCTGATCTAAATTTTAGCCTTCTCTTTTGGGTGTTCTCTTCAAACCCTTTTATGGGAAGGTGCAAGAGAACTTCAGACAGTCCACAACACACCTCATTCTCTAAAGAAAGAAGAGAGATTCTCATTCACAGTCTGTCTCTCTCTCTCTGTCTTCACTCCTGAATCCAAGGAGAAGAAGATTATGGTGCTAACTACAAAATCATTGATGCTTGGTGTTGGGTTCAGTCGAAAGTGTCATTTAGTTCTAACTTCTAAGATTAGCTCAATTTGATGAAGTATGTAGTAGAAGAAGAGTTTGTATATCACAAAGAAGATATGGCAATGTCTTGGTTTTGGATTGGTTTATGTTGTTGTTTTGGTTCATGAAACGAAATTTCGTGAACACCAGGAACTCGAGGCGCTTGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGATGCAGTAAACAAGGAATTAAAGCCTCTGGGACATACCTGTCAAAAGAAGGTAAGATTTGGGGGGAAGAAATAGCTGTGTGGACAAGCATTGTTGAGGATATAAGATGATGTTGCATTCTGTGAATCTCAATTATTGTACCTTACCATATCAAATAGGACCACTGAGCTGGTTTTTGTATTGTCTGTCATAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGTTCCTCCTGAATCCCTTTCATTTTCGATCATCTGCACGTCATAAATTAGCAAGTAGTAGGAATGGGAACCGAGTTTTGCACGTCCGGGGCCATTCAATTAATTTTGAACCATATCGATTTCGACGCTTCAGCAACTGAAAAATCTAAGCTGAAGTCAGGGAAATCACAACTGTTCAAGGCAACTTGAATGAATAGCTTCTGTTAGTTGAAAAAAGCTTTCTTTTCGTGTGTTTTCGTTCGGGTTTCGATTGATGGATTGATTTGTTTTTCAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATCCGGTAAATGAATTGATTGATTGATTGATTGATTGGAGCGACCGATGACAAAGTGATAACCCCCTGTTTATTAGGCTTTGGTGTGTGATGTATTTAGTATAAAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTGTGTTTGGGTGTATTTTTATAATTTGTCTTTGTTTGTTTATTTTTCCTCTAGAGAAGTTACTCAAAAACATTTAACTGATTTTAGGAAGGGAAATGCCCTATAAACAGGTTTGTAACTCATCTCAGCCTTTGATTTTTTTTTTCCTTTTTCTTTTTCCCCTCCCCTCTTCTCTCCTCAATTTCATTCTCCCTCTCTCTAGAATGAGGGAAAAATCAAATTAGTTGAAGTTTAAATACATGTAATGTTGAAATGTTTCTAAACCCAAGAGTTAATTGACTTGTTTGAATTACCTTA

mRNA sequence

GCTAAGCTGGGTTGGCACTTTCGAAAGCAATTCTAGTTTTATAAGCACTTGCAGTTGCAGTACCCACACAGCTGAAAAAAAATTGAAATACAGCACAAACCCCATAATCATTTCAAAAGCAAAAGCAAAAGAAGAGAGAGAAAAACAAAAACCCAAAAGCCAAAACCAAAAACAGAGAGAGAGAGAGAGAAAGCAACAAACCCAGAAAGAAAGGAAGAAGAAGAAGAAGAAGAAGAACAACAACAACAACAACAGAGAAACTGAAGGAAATTCAAAGAAGAAGAAAAAGGGTTTTGTGGTTAAGAAGATGCAGCCAGAACAAGCTCAACAACAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTTTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTCGCTTGTATCCGTGAGGAACTCGAGGCGCTTGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGATGCAGTAAACAAGGAATTAAAGCCTCTGGGACATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATCCGGTAAATGAATTGATTGATTGATTGATTGATTGGAGCGACCGATGACAAAGTGATAACCCCCTGTTTATTAGGCTTTGGTGTGTGATGTATTTAGTATAAAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTGTGTTTGGGTGTATTTTTATAATTTGTCTTTGTTTGTTTATTTTTCCTCTAGAGAAGTTACTCAAAAACATTTAACTGATTTTAGGAAGGGAAATGCCCTATAAACAGGTTTGTAACTCATCTCAGCCTTTGATTTTTTTTTTCCTTTTTCTTTTTCCCCTCCCCTCTTCTCTCCTCAATTTCATTCTCCCTCTCTCTAGAATGAGGGAAAAATCAAATTAGTTGAAGTTTAAATACATGTAATGTTGAAATGTTTCTAAACCCAAGAGTTAATTGACTTGTTTGAATTACCTTA

Coding sequence (CDS)

ATGCAGCCAGAACAAGCTCAACAACAGCAGCAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCGAGGTCGGCTCTTTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGAGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGCGCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTCGCTTGTATCCGTGAGGAACTCGAGGCGCTTGCAGATCCAATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGATGCAGTAAACAAGGAATTAAAGCCTCTGGGACATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATCCGGTAA

Protein sequence

MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

Homology

[Close]

BLAST of Tan0008816 vs. ExPASy Swiss-Prot
Match: B1H222 (RAB6-interacting golgin OS=Rattus norvegicus OX=10116 GN=Gorab PE=2 SV=2)

HSP 1 Score: 45.1 bits (105), Expect = 9.3e-04
Identity = 37/122 (30.33%), Postives = 63/122 (51.64%), Query Frame = 0


Query: 43  RAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAV 102
           R  EE+ +RKK  + + +  +  R + ET +L  I++EL+AL D +  ++  +R RID  
Sbjct: 154 RLMEEKNKRKKALLAQAIAERSRRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQA 213

Query: 103 NKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKN 162
           + E         + E EY  A      K + K QL   L  ++ ++E  + +KLEEL + 
Sbjct: 214 SLEYSYARKRFDRAEAEYVTAKLDLQRKTETKEQLTEHLCTIIQQNELRKAQKLEELMRQ 273

Query: 163 ID 165
           +D
Sbjct: 274 LD 275

[Close]

BLAST of Tan0008816 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa] >TYK25229.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. NCBI nr
Match: XP_004137876.1 (GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_000951 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. NCBI nr
Match: XP_038903091.1 (GRB10-interacting GYF protein 2-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 4.4e-75
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ EQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQTEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. NCBI nr
Match: XP_022945279.1 (uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 uncharacterized protein LOC111498737 [Cucurbita maxima] >XP_023539891.1 uncharacterized protein LOC111800435 [Cucurbita pepo subsp. pepo] >KAG6596553.1 hypothetical protein SDJN03_09733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028089.1 hypothetical protein SDJN02_09269 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 2.2e-74
Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia])

HSP 1 Score: 273.9 bits (699), Expect = 9.4e-70
Identity = 157/167 (94.01%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQ E  Q QQQLMVQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQTE--QPQQQLMVQNNQGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           K+AL+AFN+KNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KDALDAFNEKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 165

[Close]

BLAST of Tan0008816 vs. ExPASy TrEMBL
Match: A0A5D3DPH8 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003590 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. ExPASy TrEMBL
Match: A0A1S3B6L6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.1e-76
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. ExPASy TrEMBL
Match: A0A0A0LGI7 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.5e-76
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+IDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. ExPASy TrEMBL
Match: A0A6J1KYK3 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. ExPASy TrEMBL
Match: A0A6J1G0J9 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.0e-74
Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60
           MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV
Sbjct: 1   MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKV 60

Query: 61  QAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120
           Q QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY
Sbjct: 61  QVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEY 120

Query: 121 KEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 168
           KEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Sbjct: 121 KEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR 167

[Close]

BLAST of Tan0008816 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) )

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-60
Identity = 124/149 (83.22%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 18  TGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACI 77
           +GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQAQLGRVEEETKRLA I
Sbjct: 29  SGSMSFSSQMSKEDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALI 88

Query: 78  REELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQL 137
           REELE LADPMRKEVA VRK+ID+VNKELKPLGHT QKKE+EYKEALEAFN+KN+EKVQL
Sbjct: 89  REELEGLADPMRKEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQL 148

Query: 138 ITKLMELVSESERLRLKKLEELSKNIDTI 167
           IT+LMELV ESE++R+KKLEELSKNID+I
Sbjct: 149 ITRLMELVGESEKMRMKKLEELSKNIDSI 177

[Close]

BLAST of Tan0008816 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) )

HSP 1 Score: 217.6 bits (553), Expect = 7.5e-57
Identity = 120/165 (72.73%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+VNKELKPLG T QKKE+EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
           EAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Sbjct: 148 EALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of Tan0008816 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) )

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 119/165 (72.12%), Postives = 147/165 (89.09%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+VNKELKPLG T QKK  EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKVMEYK 147

Query: 122 EALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI 167
           EAL+ FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Sbjct: 148 EALDTFNEKNREKVQLITKLMELVGESEKLRMIKLEELSKSIETV 192

[Close]

BLAST of Tan0008816 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) )

HSP 1 Score: 212.2 bits (539), Expect = 3.1e-55
Identity = 120/168 (71.43%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 2   QPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ 61
           QP+   QQQ   +  +TGSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q
Sbjct: 28  QPQPQPQQQSNEMVLHTGSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQ 87

Query: 62  AQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYK 121
           AQLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+VNKELKPLG T QKKE+EYK
Sbjct: 88  AQLGRVEQETKRLSTIREELESMADPMRKEVSVVRKKIDSVNKELKPLGSTVQKKEREYK 147

Query: 122 EALEAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI 167
           EAL+ FN+KN+EKVQLITKLME   LV ESE+LR+ KLEELSK+I+T+
Sbjct: 148 EALDTFNEKNREKVQLITKLMEMEQLVGESEKLRMIKLEELSKSIETV 195

[Close]

BLAST of Tan0008816 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) )

HSP 1 Score: 208.8 bits (530), Expect = 3.5e-54
Identity = 120/159 (75.47%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 7   QQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGR 66
           Q  QQ+M      SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+AQLGR
Sbjct: 10  QPPQQMM------SLSFSSQMSKEDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGR 69

Query: 67  VEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALEA 126
           VEEET+RLA IREELE +ADPMRKEV  VRK+ID+VNKELKPLG T QKKE+EYKEAL+ 
Sbjct: 70  VEEETRRLASIREELETMADPMRKEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDT 129

Query: 127 FNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT 166
           FN+KN+EKVQLITKLMELV ESE+LRLKKL+ELS++IDT
Sbjct: 130 FNEKNREKVQLITKLMELVGESEKLRLKKLDELSRSIDT 162

The following BLAST results are available for this feature:

BLAST of Tan0008816 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1H222	9.3e-04	30.33	RAB6-interacting golgin OS=Rattus norvegicus OX=10116 GN=Gorab PE=2 SV=2	[more]

BLAST of Tan0008816 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442808.1	2.3e-76	100.00	PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 put...	[more]
XP_004137876.1	5.1e-76	99.40	GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical prote...	[more]
XP_038903091.1	4.4e-75	98.80	GRB10-interacting GYF protein 2-like [Benincasa hispida]	[more]
XP_022945279.1	2.2e-74	97.60	uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 unchar...	[more]
XP_022144720.1	9.4e-70	94.01	uncharacterized protein LOC111014340 [Momordica charantia]	[more]

BLAST of Tan0008816 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DPH8	1.1e-76	100.00	RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B6L6	1.1e-76	100.00	RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1	[more]
A0A0A0LGI7	2.5e-76	99.40	RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1	[more]
A0A6J1KYK3	1.0e-74	97.60	RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1	[more]
A0A6J1G0J9	1.0e-74	97.60	RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1	[more]

BLAST of Tan0008816 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09980.1	3.2e-60	83.22	Family of unknown function (DUF662)	[more]
AT2G36410.2	7.5e-57	72.73	Family of unknown function (DUF662)	[more]
AT2G36410.3	1.1e-55	72.12	Family of unknown function (DUF662)	[more]
AT2G36410.1	3.1e-55	71.43	Family of unknown function (DUF662)	[more]
AT3G52920.2	3.5e-54	75.47	Family of unknown function (DUF662)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	COILS	Coil	Coil	coord: 39..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..51
None	No IPR available	PANTHER	PTHR21470:SF8	EXPRESSED PROTEIN	coord: 12..166
IPR007033	RAB6-interacting golgin	PFAM	PF04949	Transcrip_act	coord: 18..165 e-value: 1.4E-75 score: 252.4
IPR007033	RAB6-interacting golgin	PANTHER	PTHR21470	RAB6-INTERACTING PROTEIN GORAB	coord: 12..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008816.1	Tan0008816.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus