Tan0008692 (gene) Snake gourd v1

Overview


Name	Tan0008692
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein RADIALIS-like 1
Location	LG02: 7870566 .. 7871928 (-)
RNA-Seq Expression	Tan0008692
Synteny	Tan0008692

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTCTTTTCAAACCCATTAAAGCTTTCATCTGTATTGTCTTGGAGCTGAAATCTCCTTGTCAAATTTAGTATCAGCTAGCAATGGCTTCAATGTCTGCTCACGAGTCAGGTGTATGGACAGCAAAGCAAAACAAGGCGTTTGAAAAGGCTTTGGCAATGTATGATCAAGACACACCTGATCGATGGTTGAATGTTGCAAAGGCCATTGGTGGAAAAACCGAAGAGGAAGTGAAGAGGCATTACCAACTTCTTGTGGAGGATGTTAAACATATTGAGTCTGGCAAAGTTCCTTTTCCCTATCGAAACTCATGAGGCAGTTGGTGACACTAACTAAGGATTGAAAGAGGTAATATAGAAAGACAAATTTAGACTCTCTTTGACAACTATTTAATTTATGTTTTTGGTTTTTGAAAATTGTGTTTGCTTTCTCATCGTTTTTCTATCATTCTCTACATTGACTTTCATCTTCATTGACAAAACATTTGATTTCTTAACCAAATTTCAAAAGTAAAAACAAATTTTTGAAAACTACTTTTCTTAGGCCTCGTTTGATAACCATTTTGTTTTTTATTTTTGGTTTTTGAAAATTAAGCTTATTTTCTCCCAATTTCTCTACAATCGAGTTCATCTCCTCTCATGAAGCATTTGAAGTCTTAGCCAAACTCTAAAAATAAATCAAGTTTTTGAAAACTACTTTGTTTAGTTTTCAAAACATAGCTTGGTTTTTGAAAACATAGGTACAAAGTAGATACAAAAACATATAAATCCATTGGTAGAAGTAGTATTTTTAGGCTTAATTTTCAAAAATCAAAAACAAAAAATCAAATGATTATCAAACGGGGCCTTAGTTTTCAAACCTTAGGTTGGTTTTTTAAAAACATACTTCAATAGTAGATAACAAAACAAGAAAACCCATTGGAAGAAGGAGTATTTTATAGACTTAATTTTCAAAAACCAAATAGTACATTACCTATAATAATATAAAGATGACCTCCCTCTTTTTGTGTAGCAAAACGGGAGTTTGAGATACCTTCTAATTTAAATACTTTTTCTTTTTTAATAAAGAAATCTTAAAAGCATTAGTTGAGTTTGATTTTAACATAATATTTATTGTTGCTTTGATTTTTCAGAATGAGAGGCATGAAGGCTCCATTCAGCCATTTCCTGCAAGAATAAAAGAAGAAATTAAAGAGTTATATTTTCTTGCTGTTGTATGTCCCTTCTAATGCAATTGTAATAATACTAAAAGGAATAAGATTCCTTGTTGTGTTTTCTTTTTAAAAAAACTACCACTCATCTACACTTTTGTCCTTTGAGTATTTATAAGTTATTATTAAATCAAAACATCAATGTTGTGATTT

mRNA sequence

GCCTTCTTTTCAAACCCATTAAAGCTTTCATCTGTATTGTCTTGGAGCTGAAATCTCCTTGTCAAATTTAGTATCAGCTAGCAATGGCTTCAATGTCTGCTCACGAGTCAGGTGTATGGACAGCAAAGCAAAACAAGGCGTTTGAAAAGGCTTTGGCAATGTATGATCAAGACACACCTGATCGATGGTTGAATGTTGCAAAGGCCATTGGTGGAAAAACCGAAGAGGAAGTGAAGAGGCATTACCAACTTCTTGTGGAGGATGTTAAACATATTGAGTCTGGCAAAGTTCCTTTTCCCTATCGAAACTCATGAGGCAGTTGGTGACACTAACTAAGGATTGAAAGAGAATGAGAGGCATGAAGGCTCCATTCAGCCATTTCCTGCAAGAATAAAAGAAGAAATTAAAGAGTTATATTTTCTTGCTGTTGTATGTCCCTTCTAATGCAATTGTAATAATACTAAAAGGAATAAGATTCCTTGTTGTGTTTTCTTTTTAAAAAAACTACCACTCATCTACACTTTTGTCCTTTGAGTATTTATAAGTTATTATTAAATCAAAACATCAATGTTGTGATTT

Coding sequence (CDS)

ATGGCTTCAATGTCTGCTCACGAGTCAGGTGTATGGACAGCAAAGCAAAACAAGGCGTTTGAAAAGGCTTTGGCAATGTATGATCAAGACACACCTGATCGATGGTTGAATGTTGCAAAGGCCATTGGTGGAAAAACCGAAGAGGAAGTGAAGAGGCATTACCAACTTCTTGTGGAGGATGTTAAACATATTGAGTCTGGCAAAGTTCCTTTTCCCTATCGAAACTCATGA

Protein sequence

MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGKVPFPYRNS

Homology

[Close]

BLAST of Tan0008692 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.1e-25
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 2  ASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  SG WTAKQNKAFE+ALA YDQDTP+RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGKVPFP-YRNS 77
            IE+G VPFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of Tan0008692 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.2e-24
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 3  SMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++ SG WT KQNKAFE+ALA+YDQDTPDRW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGKVPFP 73
           IE+G VPFP
Sbjct: 65 SIENGHVPFP 74

[Close]

BLAST of Tan0008692 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.1e-23
Identity = 47/66 (71.21%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 12 WTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVEDVKHIESGKVPF 71
          W+AK+NKAFE+ALA+YD+DTPDRW NVA+A+ G+T EEVK+HY++LVED+K+IESGKVPF
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70

Query: 72 P-YRNS 77
          P YR +
Sbjct: 71 PNYRTT 76

[Close]

BLAST of Tan0008692 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.9e-22
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   S  WT K+NK FE+ALA YDQDTPDRW NVA+A+GGK+ EEV+RHY+LL+ D
Sbjct: 1  MASNSMSSSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRD 60

Query: 61 VKHIESGKVPFP-YRNS 77
          V  IESG+ P P YR++
Sbjct: 61 VNDIESGRYPHPNYRSN 77

[Close]

BLAST of Tan0008692 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-21
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S      WT  QNK FE+ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP 73
          + +IE+G+VP P
Sbjct: 61 LINIETGRVPLP 72

[Close]

BLAST of Tan0008692 vs. NCBI nr
Match: XP_008447025.1 (PREDICTED: protein RADIALIS-like 1 [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFEKALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of Tan0008692 vs. NCBI nr
Match: KAA0036170.1 (protein RADIALIS-like 1 [Cucumis melo var. makuwa])

HSP 1 Score: 149.8 bits (377), Expect = 9.3e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFE+ALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of Tan0008692 vs. NCBI nr
Match: XP_022952073.1 (protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-like 1 [Cucurbita maxima] >XP_023554705.1 protein RADIALIS-like 1 [Cucurbita pepo subsp. pepo] >KAG6572043.1 Transcription factor RADIALIS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149.4 bits (376), Expect = 1.2e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFE+ALAMYDQD PDRWLNVAKAIGGKTEEEVKRHYQ+LVED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of Tan0008692 vs. NCBI nr
Match: XP_004151116.1 (protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_020265 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS+SAH SGVWTAKQNKAFE+ALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of Tan0008692 vs. NCBI nr
Match: XP_022135728.1 (protein RADIALIS-like 1 [Momordica charantia])

HSP 1 Score: 141.0 bits (354), Expect = 4.3e-30
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSA+ESG WTAKQNKAFEKALA+YDQDTP+RW+NVAKAIG KTEEEVKRHYQ LVED
Sbjct: 1  MASMSAYESGTWTAKQNKAFEKALAVYDQDTPNRWVNVAKAIGDKTEEEVKRHYQRLVED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESG VPFPYR S
Sbjct: 61 VKHIESGDVPFPYRTS 76

[Close]

BLAST of Tan0008692 vs. ExPASy TrEMBL
Match: A0A1S3BGF6 (protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFEKALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEKALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of Tan0008692 vs. ExPASy TrEMBL
Match: A0A5A7SYM4 (Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00290 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 4.5e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFE+ALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR S
Sbjct: 61 VKHIESGKVPFPYRTS 76

[Close]

BLAST of Tan0008692 vs. ExPASy TrEMBL
Match: A0A6J1IA78 (protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.9e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFE+ALAMYDQD PDRWLNVAKAIGGKTEEEVKRHYQ+LVED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of Tan0008692 vs. ExPASy TrEMBL
Match: A0A6J1GJG0 (protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.9e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MASMSAH SGVWTAKQNKAFE+ALAMYDQD PDRWLNVAKAIGGKTEEEVKRHYQ+LVED
Sbjct: 1  MASMSAHGSGVWTAKQNKAFEEALAMYDQDRPDRWLNVAKAIGGKTEEEVKRHYQVLVED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of Tan0008692 vs. ExPASy TrEMBL
Match: A0A0A0K344 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.7e-33
Identity = 70/76 (92.11%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS+SAH SGVWTAKQNKAFE+ALAMYD+DTPDRWLNVAKAIGGKTEEEVKRHYQLL+ED
Sbjct: 1  MASLSAHGSGVWTAKQNKAFEEALAMYDKDTPDRWLNVAKAIGGKTEEEVKRHYQLLLED 60

Query: 61 VKHIESGKVPFPYRNS 77
          VKHIESGKVPFPYR+S
Sbjct: 61 VKHIESGKVPFPYRSS 76

[Close]

BLAST of Tan0008692 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 116.7 bits (291), Expect = 8.1e-27
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 0


Query: 2  ASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVEDV 61
          +SMS+  SG WTAKQNKAFE+ALA YDQDTP+RW NVAK +GGKT EEVKRHY+LLV+D+
Sbjct: 4  SSMSSQSSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDI 63

Query: 62 KHIESGKVPFP-YRNS 77
            IE+G VPFP YR S
Sbjct: 64 NSIENGHVPFPNYRTS 79

[Close]

BLAST of Tan0008692 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 110.5 bits (275), Expect = 5.8e-25
Identity = 50/70 (71.43%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 3  SMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVEDVK 62
          SMS++ SG WT KQNKAFE+ALA+YDQDTPDRW NVA+A+GGKT EE KR Y LLV D++
Sbjct: 5  SMSSYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIE 64

Query: 63 HIESGKVPFP 73
           IE+G VPFP
Sbjct: 65 SIENGHVPFP 74

[Close]

BLAST of Tan0008692 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 103.2 bits (256), Expect = 9.3e-23
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S      WT  QNK FE+ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP 73
          + +IE+G+VP P
Sbjct: 61 LINIETGRVPLP 72

[Close]

BLAST of Tan0008692 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 103.2 bits (256), Expect = 9.3e-23
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S      WT  QNK FE+ALA+YD+DTPDRW NVAKA+GGKT EEVKRHY +LVED
Sbjct: 1  MASNSRSSISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP 73
          + +IE+G+VP P
Sbjct: 61 LINIETGRVPLP 72

[Close]

BLAST of Tan0008692 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-22
Identity = 47/72 (65.28%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MASMSAHESGVWTAKQNKAFEKALAMYDQDTPDRWLNVAKAIGGKTEEEVKRHYQLLVED 60
          MAS S   S  WT+KQNK FE+ALA+YD+DTPDRW NVAKA+G K+ EEVKRHY +LVED
Sbjct: 1  MASSSMSSSSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVED 60

Query: 61 VKHIESGKVPFP 73
          + +IE   VP P
Sbjct: 61 LMNIEQDLVPLP 72

The following BLAST results are available for this feature:

BLAST of Tan0008692 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVB8	1.1e-25	72.37	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q9SIJ5	8.2e-24	71.43	Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1	[more]
Q58FS3	4.1e-23	71.21	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]
Q6NNN0	5.9e-22	63.64	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
Q1A173	1.3e-21	66.67	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]

BLAST of Tan0008692 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447025.1	3.2e-33	94.74	PREDICTED: protein RADIALIS-like 1 [Cucumis melo]	[more]
KAA0036170.1	9.3e-33	93.42	protein RADIALIS-like 1 [Cucumis melo var. makuwa]	[more]
XP_022952073.1	1.2e-32	93.42	protein RADIALIS-like 1 [Cucurbita moschata] >XP_022972518.1 protein RADIALIS-li...	[more]
XP_004151116.1	1.6e-32	92.11	protein RADIALIS-like 1 [Cucumis sativus] >KGN44075.1 hypothetical protein Csa_0...	[more]
XP_022135728.1	4.3e-30	88.16	protein RADIALIS-like 1 [Momordica charantia]	[more]

BLAST of Tan0008692 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BGF6	1.6e-33	94.74	protein RADIALIS-like 1 OS=Cucumis melo OX=3656 GN=LOC103489576 PE=4 SV=1	[more]
A0A5A7SYM4	4.5e-33	93.42	Protein RADIALIS-like 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IA78	5.9e-33	93.42	protein RADIALIS-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111471063 PE=4 SV=1	[more]
A0A6J1GJG0	5.9e-33	93.42	protein RADIALIS-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111454835 PE=4 SV=1	[more]
A0A0A0K344	7.7e-33	92.11	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G169070 PE=4 S...	[more]

BLAST of Tan0008692 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39250.1	8.1e-27	72.37	RAD-like 1	[more]
AT2G21650.1	5.8e-25	71.43	Homeodomain-like superfamily protein	[more]
AT1G75250.1	9.3e-23	66.67	RAD-like 6	[more]
AT1G75250.2	9.3e-23	66.67	RAD-like 6	[more]
AT1G19510.1	2.1e-22	65.28	RAD-like 5	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 8..60 e-value: 4.4E-8 score: 42.9
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 4..58 score: 6.341778
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 12..58 e-value: 1.27363E-6 score: 39.0958
None	No IPR available	GENE3D	1.10.10.60		coord: 3..71 e-value: 3.2E-24 score: 86.5
None	No IPR available	PANTHER	PTHR43952:SF68	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..74
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 10..56 e-value: 1.8E-6 score: 28.0
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 2..74
IPR017884	SANT domain	PROSITE	PS51293	SANT	coord: 7..62 score: 9.55238
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 10..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0008692.1	Tan0008692.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity