Tan0008652 (gene) Snake gourd v1

Overview
NameTan0008652
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
LocationLG05: 47820536 .. 47826780 (+)
RNA-Seq ExpressionTan0008652
SyntenyTan0008652
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTGAGTTTCACCCTAATCCAAAACCATGGGCCAAACACTCCCTTAGTATTCCACAAGAGGTTGAGCTTGGAAATAAGAGGAGAAGTTAGAAGCCCAAAGGGAGCATGTGTAATGCACACCTCTAGTTCATGGCATCTTCAGCTCGACCCAGTTCAGTCTTCTCCTAACACAATTGTAAAGGAAACGAAAAAACTCTAGGTTTTTCCTCATATAAAATATTCTATTTTACAACCCTATGAAGGTAAGCTCTTCTTCATACAGTAAACTCTTACTATACTAAATTCTCTTGTCTAATTTAATTATTGGAGCCTATATGACAAATACCACACCGATATGCAACTCTTTTTATTTTGCAAATCACGTCTTCCTCCCAAAATACAAATTTATCATTGTCATGTAAAAGTCGAGTGAGATTTCTCTTACTTGGATTTTAGCAATGGAATAAAAAAAAATTAAAGAAAAAATAGAAAAAATACATGATATATTTCAAAGAAGAAAAGGCCTAAACTTATTTTACAAAAGAAAAAAAAAATCAAATTTTGGGGAACCATATGGCTCCCTAGTCTTAATGTAGGTCCGTTGTCATTATAATATGTAATGAAGAAAATGAAATGAGTTTATTTTCTAATTTATAATTATGAAGGTTTATATTGTCATGTTCATGGAATTATTAATTACGAATGAATGCTAGTTAACATGTGAAACAAATTTTCCCTTTTCTTCACTAATTTCTAATTTAGATCTTAATAAGTCGTACATTTCAAATTTGTTAAAATTGAAAAACTAAAATATAATTTTATTTCATAAATTTTGACAAAATTAAAAGAAGGTAAGCATAGGTGTTCGGATACTATGTCCATATATTTCTAGAATTATAGCTACTTAGTCTATAAACTTTGAAAATGATCCATTGTATTACTAGATTTTGAATTATGTTTATCTTTAGTCTATAATATTTAGATACTAACTGTAGTTGTTAAGAACATCTAATCATTGGTGACGTGATGTGATTTGGTTTCAAGTTTGACAATGAGATTAACTATGCAGGTAACTACTATACTAAGTTTCTTAATCAATCTCTCAAATATTTAATAATCCAATATTACACCAAATAGAAAACTCAACAATAAGAAGCATCTAAACATATTTTTAAAGACTTTAGATTTGAATGGTAAGTTGTAAAAACTTAATAACCAATAAACACAAAAATGAAATTTTGAGAAGAAAAATGTAATTCATCAAAATTAACAAATTCAATTCAATCCTATCAAATACCTAATCCAATCCAACTAGACTGGGAAATTGTAATTTTTGACCCTTTTTAAGTTTATATTTGAATTTTTGACCCCAATTTTAAATTCTGATTTTTTTGGACCCTATGATGATGAAAATGAGGTAAGAAAGAGAAAATGCATGAGATGAAATTACATATTTGCCCTCAATCTATTTATATTATATTAAATATATCCACTACCATTAATACACTTTCAACTACTTACTCAACAACCTCAACAAACTAATTAACTATCTAAAACAAACACATCTAAACACTTTCATCACTTATCTAACTCATTCTAACAAAATATTTTAATCTCACATTCTACCTCTTCAATTACTTCAAAATACCTTAAAGTTAAATCTATACATATATGCACAAGTAAGTATCTTCTTTACTCTTTCCATTTAGTTTGTGTTTTTACTTGAGTTTAATTTTATATTGGTGCACGATTATTATTGTCCATTTTTTCTTAATTTCGTTTGAATCCCGGCCGGGAAGAAGTGATGTTGCAACCGGGATTTTCTCGGTGAAGATGTTGGACCGGGAATTTACCCGGTTGAGCATTCCCATCGGGAAAATTTCCCGGTCAAAAATATGATGACCGGGAAATTGAACAGATTTTAATTATTTTTTGTGTTGTGATTTTTGTTTTCTGCAGACATCATGCCGCGTGTTTGGGTTTGTTTTGGGGGTATATGGAACGATGGAGAAAAGGATTACGATGGTGGCGAGGTTAGGGGACTTGATGTGGATGTAGAAATTAAATTTGAGGAGTTTTTGGGTCTAGTCTATGAGATAAGTTATACTGACCGGAATGATTTTAATCTTGTAATGAGATGTATATTGCCGTTAAGATCCAAATCCCCAGCATTTGTTATTAAAAATGATGTAGATCTCAAATGTTTCCTTACTTTGGAAGACGTCTCATCAATTCCACTCTACATATCTACATCTCCTACCTTTTCAAGAAGTCATGCATTTCAACCCTATTCAATTCCTTGTAAGGTACTAGATAATCCATATATGGGAGTACAAAATTATCCATATGTTTCATCCATGACTACGTCTACAGTTGTCCCTCATAACACCATAAATGGTCCGTATATGAGAATGTGTAATTCCTCATTATTTCCAAATCCCTCCACAAATTATAACGTCCAAGACATTCCATCTACACCCACATACTTCCCAAGTAATATATGTGAACAATTTGGTGAATCAAGATCCGAACACAATGAGGTTGAAGAAGATGTTTTCCCAACCAACCCCCCAACTCCCACAACCAACCTCCCAATTTCACAAACTAACCTCTCAACACAAAAGACTGTTGATGTGGTACCATCAACCTTTCCAGAGTATGATGTTGTTCCATCTACCTTTCCATATGTACCAGATTATGAGGTGGTTCCATCCACCATTCCACACATACCAACATCCTCCTATGTGTCATTCACATCCATGTTTGAGGATGACGTTGAATATTTTCATGATTGGGGTAATTATAGCTTGGAGGAAGATGATGTGGAGGTTGAAAGGATAAAAACTCATGACGAGTTTCAAGAGGCAGTAAATGATCCTGCGGAGGAGACAACAAATAGCGAGTTAGAAGATAGAGTAGATGATCATGATCATGAAGTCGACGATGAGTTAGAGGAGAGAAATGAATATGTGGTAGAGGAGGAAAACAATGGTATTGAACTTCGAACAAACACGAATTGTAGAAACCGATCGAACGATGTACATGGATCGTCAAGTAAACAAACAGTCATGCCATGTGAGTACGCTTCAGTTAAAGATGTGGAGGTGGGAGAGATATTCGTGTCCAAAAAAGATTTATGCATGCGTTTGTCTGTGTTGGCGATGAGAGACAACTTTGAGTTTAGGGTGAAAAAGTCAAATCCTAAACTTTACAAAGTTGTTTGTATTGTTCAGGAGTGCACGTGGAGGCTACGAGCAATGGGGATAAAGGGTAGCAATATATTCAAGGTGTCGAAATACTGCAAGACACATACATGTCAACATCAGATGCTGACTCACGATCATCGACAAGCTAGAAGTTGGGTAATTGGCACACTCATGAAGTCAAAATTTGAACAAGTTGGTCGTAGTTATAGGGCGAACGACATAGTTAGTGACGTGGGTCAAGAATTTGGTGTGAGTTTAACATATGATAGGGCATACAGGGCTAGAGAAAAAGCATTAGTTTTTGCCAGAGGGTCGCCAGAAGAGTCATTTAATCTGTTGCCAAGATTTGGTGAAGCTTTAAAGATTGAAAATCCAGGCACAATATTCAACCTTGAACTTGATGATGGTCAATATTTCAAACATGTCTTTATGGCCTTAAGTGCATCTATTAGAGGGTTTTTGAGCTCCATCGGACTGCAGACTTGTTGTAGATGCAACACACTTAAGGGGGAAGTACAAGGGCAAGTTGTTTGTTGCGGAGATGCGTGGATGGGAATGGCCAACTCTACCCGTTAGGTTTTGCAATCGCCGACGGAGAGACTGAAGTAGCATGGTCCTATTTTTACGACAAATGATGATTGCGATCGGTAATGTTTATAATTTGGTTGTCGTTTCTGACCGACATTTGAGCATACGCAAGGCAGTTGCTAAGGAGATGCCTGATGCATTCCACTGCATATGTATTCAACACTTGGGGGATAACTTGATGACAAAGTTCAAAAGTGAGGACCTTAGGGGTATCTTTATTCTCGCGGCGAAAGCATTTCGAGAGGCGGAATTCAATAATTATTGGGAACGTCTTCCAACTGTTGCCAAACAATATTTAGAAGGCATTGGATTACATCGATGGGCTCGGGCATTCCAATGTGGTCGAAGATACAATCGATGACAACAAACCTTCTTTGAATGTATGAACTCGATTCGAAGGATGCACGGAGTTGCCAATCACCTGGTTTATTGGATCATATTAGAGGTTGGCTTCAATCTAAATACTATAAACGTCGGAATAAAGCATCTGCATGGCCACATCGAATAACGAAGTATGCTTGCCAAATTCTTGAAGCCCGAAGAGCTAGTTCAAGGAGACATGTAGTCCGACCAGTTGATCAGTTCGAGTTTGAGGTAGATGATGGTTACCTGGGTGGGCGTGTAAATCTCCATAATAGAACTTGTACTTGTCGAGAGTTTGATTACTTTGAAATTCCTTGTTCACATGCAATTGGAGCATGTGCATTCCGTAATATAGACCCAATCACACTATGTTCTGAAGCATATCATGTTGATTCATGGGTCGACGCGTATGCAAGTCCTGTACATTCATTAGGTCATGTGTCAGAGTGGGAAATGTCATCTGAATTTCAAGACTACGAAGTGTTACCACCGAAGCAAGTATCTAGAGTGGGTCGCCGTCAAAATTTGCGCATACCATCGGTAGGGGAAGTCAGACGAGTGCATAAATGCACCCGATGTGGTAATATTGGCCACAATAGGAAAACTTGTCGACAACCACTTAACACTGTGTAGTATGTAATTTATGTCACTTATATAATTGTAATTCTGGATTTTCTTCTCTGTGGCTTACAAACGATGAATTTATATCCAAATTTGGTGCAGGAAAAAACAAGTATGAATCTGGAAAATTTCCCGGTCTCGGTGTGTCAGATCGGGAAAATTCCCGGTCAGGCCCACCGAGACCGAGAAATTTTCCAGATTCCTACTTGTTTTTTCCTGCACTTTAACAGACCACTAATATCTCACCGGGAATTTTTATATATAATTCTCATATAAAAAAACTAAGTGGCGTCAAATTTGAGAATCGAAGTACTAACTTAATTCATTAATCGGGAATAAAAGGCAATGTTTACTGAATTAACTACTAAAAAAAAGCGCGGTTAGCCCATAGTTGTACAGCGAATTGACGTCTACAAAAGTCTATGCTTGCCTGACTAAGCATATCTAAAGGCGAGGCCGTTACATCATATTCAAAAAATTTAACACAAAACATCCCGCAATCTCCACTATTAACCTGTTGCGGGACATCCGTCCCGTCTACGAACCTTCCAAGGGTGTTTGGGGAGAGTCGGTCGTACTTCTATGACGCCACCCATGACCAGTAGGTGTGGTAGTGTGGTTCTGAGCATCCTTAACTCTTCATCTAACTCTGCGTCTGTACATAGTGTGACAAGAGAATCGAAGACGACGAGCTCACCGACGTGTAGATCGACACATATTAGTATCCAATGCGTTCTAAAAATATTGAACGGCATGTACACAACGTCTACCAACTTCCATGGAATCGTATGGTCTGAATGACTGCCAATAACGTAGTCTCTAACGCTGTTGAATCGATCCCAGTTGAACGCGTCCTTCCATGGATCATTACTAATAAAGTGGTCGTACACATCGGATCGCCTCAAAAAGTCCTGTGCAGTAGAATTGGGTTACTTGTTTAACCAAAATCAATATAAAACTGAAATTACGAACTTCAATACCGTAATGACTATATCTGCAATGACGAACTTCTGACGGCATAGGTTTGGATGAATGCTCGCCTTCGTTCGGATGAAGATGAACAAAGCGTCAATAACCTGTATATAATAAAGACGATATTGTTAATTAACATCATAACCCGAACCCAACACATAAAAGGGGTTAGAACCACATACCTCGTCACTCATCCACTGGGATGACGTCAAAAGGGTTTGGAACCACATTTTGTTGCGAGAAGCGTACACGTTGATGCGTTCTTCATTGTCTGTTCTCGAATCATCCATCCACTTCTGGAATTTAGTATCCATACGTTCAGGTATAGGGCATAGTGGGTCGTACACTTTAACACTTCTCTTCTTCCCATCCGCTTCGTGGTTCGCATCCATGGTGAGCGTAGCTTATATGTCGGTCGTCGCTACGCTTACCTCGGCGAGGTAAATCTTCACCAGTGCCACGACCTCCGAATCGAGTCCGAATCAACCTCCTCTTCGGTTTTTGGTATTAG

mRNA sequence

ATGGTTTTGAGTTTCACCCTAATCCAAAACCATGGGCCAAACACTCCCTTAGTATTCCACAAGAGGTTGAGCTTGGAAATAAGAGGAGAAGTTAGAAGCCCAAAGGGAGCATGTGTAATGCACACCTCTAACATCATGCCGCGTGTTTGGGTTTGTTTTGGGGGTATATGGAACGATGGAGAAAAGGATTACGATGGTGGCGAGGTTAGGGGACTTGATGTGGATGTAGAAATTAAATTTGAGGAGTTTTTGGGTCTAGTCTATGAGATAAGTTATACTGACCGGAATGATTTTAATCTTGTAATGAGATGTATATTGCCGTTAAGATCCAAATCCCCAGCATTTGTTATTAAAAATGATGTAGATCTCAAATGTTTCCTTACTTTGGAAGACGTCTCATCAATTCCACTCTACATATCTACATCTCCTACCTTTTCAAGAAGTCATGCATTTCAACCCTATTCAATTCCTTGTAAGGTACTAGATAATCCATATATGGGAGTACAAAATTATCCATATGTTTCATCCATGACTACGTCTACAGTTGTCCCTCATAACACCATAAATGGTCCCTTGGAGGAAGATGATGTGGAGGTTGAAAGGATAAAAACTCATGACGAGTTTCAAGAGGCAGATGCACGGAGTTGCCAATCACCTGGTTTATTGGATCATATTAGAGGTTGGCTTCAATCTAAATACTATAAACGTCGGAATAAAGCATCTGCATGGCCACATCGAATAACGAAGTATGCTTGCCAAATTCTTGAAGCCCGAAGAGCTAGTTCAAGGAGACATGTAGTCCGACCAGTTGATCAGTTCGAGTTTGAGGTAGATGATGGTTACCTGGGTGGGCGTGTAAATCTCCATAATAGAACTTGTACTTGTCGAGAGTTTGATTACTTTGAAATTCCTTGTTCACATGCAATTGGAGCATGTGCATTCCGTAATATAGACCCAATCACACTATGTTCTGAAGCATATCATGTTGATTCATGGGTCGACGCGTATGCAAGTCCTGTACATTCATTAGGTCATGTGTCAGAGTGGGAAATGTCATCTGAATTTCAAGACTACGAAGTGTTACCACCGAAGCAAGTATCTAGAGTGGGTCGCCTGCCACGACCTCCGAATCGAGTCCGAATCAACCTCCTCTTCGGTTTTTGGTATTAG

Coding sequence (CDS)

ATGGTTTTGAGTTTCACCCTAATCCAAAACCATGGGCCAAACACTCCCTTAGTATTCCACAAGAGGTTGAGCTTGGAAATAAGAGGAGAAGTTAGAAGCCCAAAGGGAGCATGTGTAATGCACACCTCTAACATCATGCCGCGTGTTTGGGTTTGTTTTGGGGGTATATGGAACGATGGAGAAAAGGATTACGATGGTGGCGAGGTTAGGGGACTTGATGTGGATGTAGAAATTAAATTTGAGGAGTTTTTGGGTCTAGTCTATGAGATAAGTTATACTGACCGGAATGATTTTAATCTTGTAATGAGATGTATATTGCCGTTAAGATCCAAATCCCCAGCATTTGTTATTAAAAATGATGTAGATCTCAAATGTTTCCTTACTTTGGAAGACGTCTCATCAATTCCACTCTACATATCTACATCTCCTACCTTTTCAAGAAGTCATGCATTTCAACCCTATTCAATTCCTTGTAAGGTACTAGATAATCCATATATGGGAGTACAAAATTATCCATATGTTTCATCCATGACTACGTCTACAGTTGTCCCTCATAACACCATAAATGGTCCCTTGGAGGAAGATGATGTGGAGGTTGAAAGGATAAAAACTCATGACGAGTTTCAAGAGGCAGATGCACGGAGTTGCCAATCACCTGGTTTATTGGATCATATTAGAGGTTGGCTTCAATCTAAATACTATAAACGTCGGAATAAAGCATCTGCATGGCCACATCGAATAACGAAGTATGCTTGCCAAATTCTTGAAGCCCGAAGAGCTAGTTCAAGGAGACATGTAGTCCGACCAGTTGATCAGTTCGAGTTTGAGGTAGATGATGGTTACCTGGGTGGGCGTGTAAATCTCCATAATAGAACTTGTACTTGTCGAGAGTTTGATTACTTTGAAATTCCTTGTTCACATGCAATTGGAGCATGTGCATTCCGTAATATAGACCCAATCACACTATGTTCTGAAGCATATCATGTTGATTCATGGGTCGACGCGTATGCAAGTCCTGTACATTCATTAGGTCATGTGTCAGAGTGGGAAATGTCATCTGAATTTCAAGACTACGAAGTGTTACCACCGAAGCAAGTATCTAGAGTGGGTCGCCTGCCACGACCTCCGAATCGAGTCCGAATCAACCTCCTCTTCGGTTTTTGGTATTAG

Protein sequence

MVLSFTLIQNHGPNTPLVFHKRLSLEIRGEVRSPKGACVMHTSNIMPRVWVCFGGIWNDGEKDYDGGEVRGLDVDVEIKFEEFLGLVYEISYTDRNDFNLVMRCILPLRSKSPAFVIKNDVDLKCFLTLEDVSSIPLYISTSPTFSRSHAFQPYSIPCKVLDNPYMGVQNYPYVSSMTTSTVVPHNTINGPLEEDDVEVERIKTHDEFQEADARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQFEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSWVDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGRLPRPPNRVRINLLFGFWY
Homology
[Close]
BLAST of Tan0008652 vs. NCBI nr
Match: XP_022145820.1 (uncharacterized protein LOC111015181 [Momordica charantia])

HSP 1 Score: 166.4 bits (420), Expect = 4.9e-37
Identity = 82/159 (51.57%), Postives = 101/159 (63.52%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQ 272
           AR      LLDHIRG LQ+ +Y RR  A++    ++ YA  +      S RRHVV  +DQ
Sbjct: 335 ARKLPVTALLDHIRGKLQNWFYDRRTLAASRSTTLSDYAENMYAEYSNSVRRHVVDNIDQ 394

Query: 273 FEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSW 332
           F F+V D  L G V+L+  TC CREFDYF+IPCSHAI A   RNI+P +LC EAY  +SW
Sbjct: 395 FHFQVQDDNLDGIVDLNAMTCNCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSW 454

Query: 333 VDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           + AYA P+  +GHVS W  S EF +  V PPK V RVGR
Sbjct: 455 ILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGR 493

[Close]
BLAST of Tan0008652 vs. NCBI nr
Match: XP_022159268.1 (uncharacterized protein LOC111025678 [Momordica charantia])

HSP 1 Score: 164.9 bits (416), Expect = 1.4e-36
Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 0 

Query: 221 LLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQFEFEVDDG 280
           LLDHIRG LQ+ +Y RR  A++    ++ YA  +      S+RRHVV  +DQF F+V DG
Sbjct: 325 LLDHIRGKLQTWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDG 384

Query: 281 YLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSWVDAYASPV 340
            L G V+L+   C+CREFDYF+IPCSHAI A   RNI+P +LC EAY  +SW+ AYA P+
Sbjct: 385 NLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPI 444

Query: 341 HSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
             +GH+S W  S EF +  V PPK V RVGR
Sbjct: 445 FPVGHISTWNSSPEFVNIPVEPPKTVPRVGR 475

[Close]
BLAST of Tan0008652 vs. NCBI nr
Match: XP_022154610.1 (uncharacterized protein LOC111021833 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-36
Identity = 80/159 (50.31%), Postives = 101/159 (63.52%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQ 272
           AR      LLDHIRG L + +Y RR  A++    ++ YA  +      S+RRHVV  +DQ
Sbjct: 128 ARKLPVTALLDHIRGKLHNWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQ 187

Query: 273 FEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSW 332
           F F+V DG   G V+L+  TC+CREFDYF+IPCSH I A   RNI+P +LC EAY  +SW
Sbjct: 188 FHFQVRDGNFDGIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSW 247

Query: 333 VDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           + AYA P+  +GHVS W  S EF +  V PPK V RVGR
Sbjct: 248 ILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGR 286

[Close]
BLAST of Tan0008652 vs. NCBI nr
Match: XP_022153146.1 (uncharacterized protein LOC111020715 [Momordica charantia])

HSP 1 Score: 164.1 bits (414), Expect = 2.4e-36
Identity = 82/159 (51.57%), Postives = 100/159 (62.89%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQ 272
           AR      LLDHIRG LQ+ +Y RR  AS+    ++ YA   L     ++RRHVV  +DQ
Sbjct: 441 ARKLPVTALLDHIRGLLQTWFYDRRTLASSRSTTLSYYAENKLAEYSDNARRHVVVNIDQ 500

Query: 273 FEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSW 332
           F  +V DG L G V+ ++RTC CREFDYF+IPCSHAI     RNI+P TLC EAY  +SW
Sbjct: 501 FHVQVRDGNLDGIVDFNSRTCNCREFDYFKIPCSHAIAEAMMRNINPYTLCDEAYTTNSW 560

Query: 333 VDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           V AYA P+  +GHVS W  S +F D  V  P  V RVGR
Sbjct: 561 VMAYAEPIFPIGHVSTWNSSPDFVDTPVEAPYMVPRVGR 599

[Close]
BLAST of Tan0008652 vs. NCBI nr
Match: XP_022154964.1 (protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 3.2e-36
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQIL-----EARRAS------ 272
           AR      LLDHIRG LQ  +Y+RR  AS+    ++ YA +++      ARR S      
Sbjct: 211 ARKLPVTALLDHIRGVLQRWFYERRTLASSRQSTLSDYAEEMIAEASDNARRXSDYAEEM 270

Query: 273 -------SRRHVVRPVDQFEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAF 332
                  +RRH+V  +DQF FEV DG L G V+L ++TCTCREFDYF++PCSHAI A   
Sbjct: 271 IAEASDNARRHIVMNIDQFNFEVRDGNLNGDVDLQSQTCTCREFDYFKVPCSHAIAAACS 330

Query: 333 RNIDPITLCSEAYHVDSWVDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           R+I+P TLC EAY V+SW+ AYA P+  +G  S W+ S  F + +V PPK+V RVGR
Sbjct: 331 RSINPYTLCDEAYTVNSWMLAYAEPIFPVGSSSTWKSSPGFVNIDVQPPKKVVRVGR 387

[Close]
BLAST of Tan0008652 vs. ExPASy TrEMBL
Match: A0A6J1CVL4 (uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015181 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.4e-37
Identity = 82/159 (51.57%), Postives = 101/159 (63.52%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQ 272
           AR      LLDHIRG LQ+ +Y RR  A++    ++ YA  +      S RRHVV  +DQ
Sbjct: 335 ARKLPVTALLDHIRGKLQNWFYDRRTLAASRSTTLSDYAENMYAEYSNSVRRHVVDNIDQ 394

Query: 273 FEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSW 332
           F F+V D  L G V+L+  TC CREFDYF+IPCSHAI A   RNI+P +LC EAY  +SW
Sbjct: 395 FHFQVQDDNLDGIVDLNAMTCNCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSW 454

Query: 333 VDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           + AYA P+  +GHVS W  S EF +  V PPK V RVGR
Sbjct: 455 ILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGR 493

[Close]
BLAST of Tan0008652 vs. ExPASy TrEMBL
Match: A0A6J1DYC4 (uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025678 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.9e-37
Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 0 

Query: 221 LLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQFEFEVDDG 280
           LLDHIRG LQ+ +Y RR  A++    ++ YA  +      S+RRHVV  +DQF F+V DG
Sbjct: 325 LLDHIRGKLQTWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQFHFQVRDG 384

Query: 281 YLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSWVDAYASPV 340
            L G V+L+   C+CREFDYF+IPCSHAI A   RNI+P +LC EAY  +SW+ AYA P+
Sbjct: 385 NLDGIVDLNAMMCSCREFDYFKIPCSHAIAAATMRNINPYSLCDEAYTTNSWILAYAEPI 444

Query: 341 HSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
             +GH+S W  S EF +  V PPK V RVGR
Sbjct: 445 FPVGHISTWNSSPEFVNIPVEPPKTVPRVGR 475

[Close]
BLAST of Tan0008652 vs. ExPASy TrEMBL
Match: A0A6J1DK35 (uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021833 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.1e-37
Identity = 80/159 (50.31%), Postives = 101/159 (63.52%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQ 272
           AR      LLDHIRG L + +Y RR  A++    ++ YA  +      S+RRHVV  +DQ
Sbjct: 128 ARKLPVTALLDHIRGKLHNWFYDRRTLAASRSTTLSDYAENMYAEYSDSARRHVVDNIDQ 187

Query: 273 FEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSW 332
           F F+V DG   G V+L+  TC+CREFDYF+IPCSH I A   RNI+P +LC EAY  +SW
Sbjct: 188 FHFQVRDGNFDGIVDLNAMTCSCREFDYFKIPCSHVIAAAMMRNINPYSLCDEAYTTNSW 247

Query: 333 VDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           + AYA P+  +GHVS W  S EF +  V PPK V RVGR
Sbjct: 248 ILAYAEPIFPVGHVSTWNSSPEFVNIPVEPPKTVPRVGR 286

[Close]
BLAST of Tan0008652 vs. ExPASy TrEMBL
Match: A0A6J1DJT1 (uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020715 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-36
Identity = 82/159 (51.57%), Postives = 100/159 (62.89%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQILEARRASSRRHVVRPVDQ 272
           AR      LLDHIRG LQ+ +Y RR  AS+    ++ YA   L     ++RRHVV  +DQ
Sbjct: 441 ARKLPVTALLDHIRGLLQTWFYDRRTLASSRSTTLSYYAENKLAEYSDNARRHVVVNIDQ 500

Query: 273 FEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSW 332
           F  +V DG L G V+ ++RTC CREFDYF+IPCSHAI     RNI+P TLC EAY  +SW
Sbjct: 501 FHVQVRDGNLDGIVDFNSRTCNCREFDYFKIPCSHAIAEAMMRNINPYTLCDEAYTTNSW 560

Query: 333 VDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           V AYA P+  +GHVS W  S +F D  V  P  V RVGR
Sbjct: 561 VMAYAEPIFPIGHVSTWNSSPDFVDTPVEAPYMVPRVGR 599

[Close]
BLAST of Tan0008652 vs. ExPASy TrEMBL
Match: A0A6J1DNT3 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111022108 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-36
Identity = 85/177 (48.02%), Postives = 111/177 (62.71%), Query Frame = 0 

Query: 213 ARSCQSPGLLDHIRGWLQSKYYKRRNKASAWPHRITKYACQIL-----EARRAS------ 272
           AR      LLDHIRG LQ  +Y+RR  AS+    ++ YA +++      ARR S      
Sbjct: 211 ARKLPVTALLDHIRGVLQRWFYERRTLASSRQSTLSDYAEEMIAEASDNARRXSDYAEEM 270

Query: 273 -------SRRHVVRPVDQFEFEVDDGYLGGRVNLHNRTCTCREFDYFEIPCSHAIGACAF 332
                  +RRH+V  +DQF FEV DG L G V+L ++TCTCREFDYF++PCSHAI A   
Sbjct: 271 IAEASDNARRHIVMNIDQFNFEVRDGNLNGDVDLQSQTCTCREFDYFKVPCSHAIAAACS 330

Query: 333 RNIDPITLCSEAYHVDSWVDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGR 372
           R+I+P TLC EAY V+SW+ AYA P+  +G  S W+ S  F + +V PPK+V RVGR
Sbjct: 331 RSINPYTLCDEAYTVNSWMLAYAEPIFPVGSSSTWKSSPGFVNIDVQPPKKVVRVGR 387

[Close]
BLAST of Tan0008652 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 52.8 bits (125), Expect = 7.4e-07
Identity = 32/117 (27.35%), Postives = 52/117 (44.44%), Query Frame = 0 

Query: 265 HVVRPVDQFEFEVDDGYLGGR--VNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITL 324
           ++V P+D   F+V      G   V L + +CTC +F  ++ PC HA+  C     +P+  
Sbjct: 622 YIVTPLDNNAFQVATALDKGECIVQLSDCSCTCGDFQRYKFPCLHALAVCKKLKFNPLQY 681

Query: 325 CSEAYHVDSWVDAYASPVHSLGHVSEWEMSSEFQDYEVLPPKQVSRVGRLPRPPNRV 380
             + Y ++     YA+    +  +S W  +S      +LPP  V      P PP  V
Sbjct: 682 VDDCYTLERLKRTYATIFSHVPEMSAWPEASGVP--RLLPP--VIPPSPPPSPPTYV 734

[Close]
BLAST of Tan0008652 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-06
Identity = 27/97 (27.84%), Postives = 46/97 (47.42%), Query Frame = 0 

Query: 255 LEARRASSRRHVVRPVDQFEFEVDDGYLGGR--VNLHNRTCTCREFDYFEIPCSHAIGAC 314
           LE     S  +V+  +++  F+V +        V L+  TCTCR+F  ++ PC HA+   
Sbjct: 603 LEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVF 662

Query: 315 AFRNIDPITLCSEAYHVDSWVDAYASPVHSLGHVSEW 350
               I+P+    E Y V+ +   YA+    +  V+ W
Sbjct: 663 EKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAW 699

[Close]
BLAST of Tan0008652 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 50.4 bits (119), Expect = 3.7e-06
Identity = 21/66 (31.82%), Postives = 34/66 (51.52%), Query Frame = 0 

Query: 284 GRVNLHNRTCTCREFDYFEIPCSHAIGACAFRNIDPITLCSEAYHVDSWVDAYASPVHSL 343
           G V L++ TCTC EF   + PC HA+  C    I+P+    + Y V+ +   Y++    +
Sbjct: 650 GIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSPV 709

Query: 344 GHVSEW 350
             +S W
Sbjct: 710 PELSAW 715

The following BLAST results are available for this feature:
BLAST of Tan0008652 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0008652 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145820.14.9e-3751.57uncharacterized protein LOC111015181 [Momordica charantia][more]
XP_022159268.11.4e-3652.32uncharacterized protein LOC111025678 [Momordica charantia][more]
XP_022154610.11.9e-3650.31uncharacterized protein LOC111021833 [Momordica charantia][more]
XP_022153146.12.4e-3651.57uncharacterized protein LOC111020715 [Momordica charantia][more]
XP_022154964.13.2e-3648.02protein FAR1-RELATED SEQUENCE 4-like [Momordica charantia][more]
BLAST of Tan0008652 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CVL42.4e-3751.57uncharacterized protein LOC111015181 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1DYC46.9e-3752.32uncharacterized protein LOC111025678 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DK359.1e-3750.31uncharacterized protein LOC111021833 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1DJT11.2e-3651.57uncharacterized protein LOC111020715 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1DNT31.5e-3648.02protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111022... [more]
BLAST of Tan0008652 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64255.17.4e-0727.35MuDR family transposase [more]
AT1G64260.11.3e-0627.84MuDR family transposase [more]
AT1G49920.13.7e-0631.82MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 291..318
e-value: 9.2E-8
score: 41.8
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 288..312
e-value: 3.9E-7
score: 29.6
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 284..316
score: 9.346741

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0008652.1Tan0008652.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding